Sciurus carolinensis (gray squirrel): 124984842 Help Entry 124984842         CDS       T08117                                  Name (RefSeq) collagen alpha-1(IV) chain   KO K06237   collagen type IV alpha Organism ncar  Sciurus carolinensis (gray squirrel) Pathway ncar04151   PI3K-Akt signaling pathway ncar04510   Focal adhesion ncar04512   ECM-receptor interaction ncar04820   Cytoskeleton in muscle cells ncar04926   Relaxin signaling pathway ncar04933   AGE-RAGE signaling pathway in diabetic complications ncar04974   Protein digestion and absorption ncar05146   Amoebiasis ncar05165   Human papillomavirus infection ncar05200   Pathways in cancer ncar05222   Small cell lung cancer Brite KEGG Orthology (KO) [BR:ncar00001]  09130 Environmental Information Processing   09132 Signal transduction    04151 PI3K-Akt signaling pathway     124984842   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     124984842  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     124984842   09142 Cell motility    04820 Cytoskeleton in muscle cells     124984842  09150 Organismal Systems   09152 Endocrine system    04926 Relaxin signaling pathway     124984842   09154 Digestive system    04974 Protein digestion and absorption     124984842  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     124984842   09162 Cancer: specific types    05222 Small cell lung cancer     124984842   09172 Infectious disease: viral    05165 Human papillomavirus infection     124984842   09174 Infectious disease: parasitic    05146 Amoebiasis     124984842   09167 Endocrine and metabolic disease    04933 AGE-RAGE signaling pathway in diabetic complications     124984842  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:ncar04147]     124984842    00536 Glycosaminoglycan binding proteins [BR:ncar00536]     124984842 Exosome [BR:ncar04147]  Exosomal proteins   Exosomal proteins of other cancer cells    124984842 Glycosaminoglycan binding proteins [BR:ncar00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    124984842 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  124984842 NCBI-ProteinID:  XP_047408867 LinkDB All DBs Position 5:2778166..2912655 Genome browser AA seq 1669 aa AA seqDB search MGPRLGVWLLLLPVALLLHEERSRAAAKGGCDGSGCGKCDCHGVKGQKGERGLPGLQGVI GFPGMQGPEGPQGPPGQKGDTGEPGLPGTKGTRGPPGAAGYPGNPGLPGIPGQDGPPGPP GIPGCNGTKGERGPLGPPGLPGFSGNPGPPGLPGMKGDPGEILGHVPGTLLKGERGFPGA PGTPGSPGLPGLQGPVGPPGFTGPPGPPGPPGPPGEKGQMGSSFQGPKGDKGDQGVSGPP GMPGQAQVKEKGDFATTGEKGQKGEPGFQGMPGFGEKGEPGKPGPRGKPGKDGEKGEKGS PGFPGDSGYPGLPGRQGPQGDKGEAGPPGPPGIVIGTGPVGEKGERGYPGAPGLRGEPGP KGYPGLQGQPGPPGFPVPGQAGAPGFPGERGEKGDQGFPGTSLPGLSGKDGLPGPPGPPG PPGQPGHTNGIVECQPGPPGDQGPPGTPGHRGLTGEMGEKGQKGESCPFCDTEGLRGPPG PQGPPGEIGFPGQPGAKGDRGLPGRDGLEGLPGPQGAPGLMGQPGAKGEPGEIYFDIRLK GDKGDPGFPGQPGMPGRAGTPGRDGHPGLPGPKGSPGSVGLKGERGPPGGPGFPGSRGDI GPPGPPGFGPVGPIGDKGQAGFPGSPGSPGLPGPKGEAGKVVPLPGPPGAEGLPGSPGFP GPQGDRGFPGTPGRPGLPGEKGSVGQPGIGFPGPPGPKGVDGLPGDVGPPGSPGRPGFNG LPGSPGLQGQKGEPGVGLPGLKGLPGLPGIPGTPGEKGSIGGPGVPGEHGAIGPPGLQGI RGDPGPPGAQGPAGPPGAPGIGPPGVMGPPGGQGPPGSSGPPGVKGEKGFPGFPGLDMPG PKGDKGAQGLPGLTGQSGLPGLPGQQGTPGIPGFPGPKGEMGVMGTPGQPGSPGPAGAPG LPGEKGDHGFPGSSGPRGDPGFKGDKGDVGLPGKPGSMDKVDMGSMKGQKGDQGEKGQIG PTGDKGSPGDPGTPGVPGKDGQAGHPGQPGPKGDPGVSGTPGAPGLPGPKGSVGGMGLPG TPGEKGVPGIPGPQGVPGLPGEKGAKGEKGQAGLPGIGIPGRPGDKGDQGAAGFPGSPGE KGEKGSTGIPGMPGSPGPKGSPGSVGYPGSPGLPGEKGDKGLPGLDGIPGVKGEAGLPGR PGPTGPAGQKGEPGSDGIPGSAGEKGEPGLPGRGFPGFPGSKGDKGSKGEVGFPGLAGSP GIPGPKGEQGFMGPPGPQGQPGLPGTPGRPVEGPKGDRGPQGQPGLPGLPGPMGPPGLPG LDGLKGDKGNPGWPGAPGVPGPKGDPGFQGMPGIGGSPGITGSKGDMGPPGVPGFQGQKG LPGLQGVKGDQGDQGIPGPKGLPGPPGPPGPYDIIKGEPGLPGPEGPPGLKGLQGPPGPK GQQGVAGSVGLPGPPGAPGFDGAPGQKGETGPFGPPGPRGFPGPPGPDGLPGSMGPPGTP SVDHGFLVTRHSQTTDDPSCPPGTKILYHGYSLLYVQGNERAHGQDLGTAGSCLRKFSTM PFLFCNINNVCNFASRNDYSYWLSTPEPMPMSMAPITGDSIRPFISRCAVCEAPAMVMAV HSQTIQIPQCPSGWSSLWIGYSFVMHTSAGAEGSGQALASPGSCLEEFRSAPFIECHGRG TCNYYANAYSFWLATIERSEMFKKPTPSTLKAGELRTHVSRCQVCMRRT NT seq 5010 nt NT seq  +upstreamnt  +downstreamnt atggggccccggctcggcgtctggctgctgctgctgcccgtcgcccttctgctccacgag gagcgcagccgggccgctgcgaagggtggttgtgatggctctggctgtgggaaatgtgac tgccatggagtgaagggacagaagggggaacgaggtctcccagggctacaaggtgtcatt ggatttcctggaatgcaaggacccgaggggccgcagggaccacctggacagaagggtgac acgggagaaccaggacttcctggcacaaaagggacaagaggacccccaggagctgcaggt tacccgggaaacccaggacttccgggtattcctggccaagatggtcctccaggtccccca ggtatcccaggatgcaacggtacaaagggagagagaggaccgctcgggccgcctggtttg cctggattctctggaaatcctggacctccagggttacccggaatgaagggggatccaggt gaaatactgggccacgtgcccgggacgctgttgaaaggggaaagaggatttcctggcgcc cccgggacaccaggttcgccgggattgccaggcctgcaaggacccgtcggccctccagga ttcacgggaccaccaggccccccaggtcctcctggacctccaggagaaaaggggcagatg ggctccagctttcaaggaccaaaaggcgacaagggtgaccaaggggtcagtggacctcct ggaatgccaggacaggcacaggttaaagaaaaaggggactttgccaccacaggagaaaag ggtcaaaaaggtgaacctggatttcaggggatgccagggtttggtgagaaaggcgaaccc ggaaagccagggccgcggggaaaacctggaaaagatggtgaaaaaggagaaaaagggagt ccgggttttcctggcgattcgggatacccgggactcccaggccgacagggccctcaggga gacaaaggtgaagccggccctccgggtccccctggaattgttataggcacaggacctgtg ggagaaaaaggggagcgaggctacccaggggctcccgggctgagaggagagccaggcccc aaaggttacccaggattacaaggccagccaggacccccaggcttccctgtaccaggacag gccggtgctcccggcttccctggcgaaagaggagaaaaaggagaccaaggatttccagga acgtctttgccaggactgagtgggaaggatggactcccaggccctccaggtcccccaggg ccccctgggcagcctggacacacaaatggcattgtggaatgtcagcctggaccgcctggt gatcaaggccctcccgggactccaggacatcgaggattgacaggagaaatgggagagaaa ggtcagaaaggagagagctgccccttctgtgacacagaaggacttcgagggccgcccggg ccacagggtcccccaggagagatcggtttcccgggacagccaggggccaagggcgacaga ggtctacccggcagggacggtcttgaaggattgcctggaccacaaggtgcacctggcctg atgggccagccaggagccaagggagagcctggagagatttatttcgacatacgactcaaa ggcgacaaaggagaccccggttttccaggacagcccggcatgccagggagagcagggacc ccgggcagagacggccatccaggtcttcctggccccaaaggctccccgggctctgtagga ttgaagggagagcgtggcccccctggaggacctggcttccccggcagccgtggtgacatc ggcccccctgggcctccgggctttggtcctgttggccccattggtgacaaaggacaagca ggctttcctggaagcccggggtcccccggcctgccaggtccgaagggtgaagcgggaaag gtggttcccttacctggccccccaggagcagaaggactcccgggatccccaggcttccca ggaccccaaggtgaccgaggcttccctggaacccctggacggccaggcctcccgggcgag aagggctctgtgggccagccggggattggatttcctgggcctcctggacccaaaggtgtt gatggcttacctggagacgtgggacctccggggagtccaggtcgcccgggatttaatggc ttacctggcagcccaggtttgcagggccaaaagggagagcctggcgtgggcctgccaggg ctcaaggggctgccgggccttcctggcattcctggcacacccggggagaagggcagcatc gggggaccaggcgttcctggagaacacggggcgatcggcccacctgggcttcaggggatc agaggtgacccagggcctcctggagcacaaggcccagcaggaccaccgggagcgccagga ataggcccccctggagttatgggcccccctggagggcagggacccccagggtcatcaggt cctcccggcgtcaaaggagagaaaggtttccctggattcccgggactcgacatgcctggc cctaaaggagacaaaggggctcaaggacttcccggcctaactggacagtcagggctgcct ggccttcccggacagcagggcacgcctggaattccggggttcccaggtcccaagggagaa atgggtgtcatgggaaccccagggcaaccgggctcaccaggacctgcgggcgccccagga ttacctggagaaaaaggagatcacggcttcccgggctcctcaggacccaggggagaccca ggtttcaaaggcgataaaggggatgttgggctccctggaaagccggggtccatggataaa gtggacatgggcagcatgaagggacagaagggagaccaaggagaaaaaggacaaattgga cccactggtgataaaggatccccaggagaccctggaacgccaggagtgcccgggaaggat gggcaggcagggcaccctggacaaccagggcctaagggtgaccctggtgtgagtggaacc ccaggggctccaggactccctggaccgaaaggctccgtgggtggaatgggcttgccggga acaccaggggagaagggcgtacctggcatccccggcccacagggtgtccctggcttacct ggagagaaaggggccaaaggagagaaggggcaggcgggtctgcctggcatcgggattcct gggcggcctggcgacaagggagaccagggggcagccgggttcccgggaagccctggagag aagggagagaagggcagcactgggattccaggaatgccggggtctccgggccccaagggg tctccagggagcgttggctatccaggaagccctgggttgcctggggagaagggtgacaaa ggcctcccaggactggatggcatccctggtgtcaaaggagaagcaggtctccctggaagg cctggccccacaggcccagccggacagaagggggagccgggcagtgatggaattcctgga tcggcaggagagaagggcgagccaggtctgccaggaagaggattcccagggtttccaggg agcaaaggagacaaaggttcaaagggcgaagtgggtttccctggattagctgggagtcca ggaattcctggacccaaaggcgagcaaggattcatgggtcctccggggccccaaggacag ccaggcttacccggcactcctggccgccccgtggaggggcccaaaggggaccgaggacct cagggacaacctggcctgccagggcttccgggacccatggggcctccagggcttcctggg cttgatgggctgaagggtgacaagggaaatccaggctggccaggagcacctggtgtacca gggcccaagggagatccaggcttccagggcatgccgggcattggcggctctcctggaatc acaggttctaagggtgatatggggcctccaggagttccaggatttcaaggtcagaagggt cttcccggcctccagggagtgaaaggagatcagggagatcaagggatccccggccctaaa ggtctcccaggccctcccggccctccaggtccttacgatatcatcaagggggagccagga ctccctggtcctgagggtccaccaggtctgaaagggctccagggccctccaggccccaaa gggcagcaaggtgtggcaggctcggtgggcttgcctggacctccaggtgcccctggcttt gacggtgcccctggccagaaaggagagacaggacctttcgggcctcctggtccaagaggg tttcctggcccaccaggccctgatggattgccaggatccatggggcccccgggcacccca tccgttgaccatggcttccttgtgaccaggcatagtcagacaacagatgacccttcgtgt cctcctgggaccaaaatcctttaccacgggtactccctgctctacgtgcagggcaacgaa cgggcccacggccaagatttgggcacggccggcagctgcctgcgcaagttcagcacgatg cccttcctgttctgcaacatcaacaacgtgtgcaacttcgcctcgcgcaatgactactcc tactggctgtccacgccggagcccatgcccatgtccatggcgcccatcacgggggacagc atccggccgttcatcagcaggtgtgccgtgtgcgaggcgccagccatggtgatggctgtg catagtcagaccattcagatcccgcagtgccccagcggatggtcgtcgctatggattggc tactccttcgtgatgcacaccagtgccggtgctgaaggttctggccaagccctggcgtcc cccggctcctgtctggaagagttcagaagcgcaccgttcatcgagtgccacggccgtggg acttgtaactactatgcaaatgcttacagcttttggctcgccaccatagagagaagcgag atgttcaagaagcccacgccatccaccttgaaggcaggggagctacgcacgcacgtcagc cgctgccaagtttgtatgaggagaacataa

DBGET integrated database retrieval system