Sciurus carolinensis (gray squirrel): 124984846
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Entry
124984846 CDS
T08117
Name
(RefSeq) F-box/WD repeat-containing protein 1A isoform X1
KO
K03362
F-box and WD-40 domain protein 1/11
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04114
Oocyte meiosis
ncar04120
Ubiquitin mediated proteolysis
ncar04218
Cellular senescence
ncar04310
Wnt signaling pathway
ncar04340
Hedgehog signaling pathway
ncar04390
Hippo signaling pathway
ncar04710
Circadian rhythm
ncar05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124984846
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
124984846
04340 Hedgehog signaling pathway
124984846
04390 Hippo signaling pathway
124984846
09140 Cellular Processes
09143 Cell growth and death
04114 Oocyte meiosis
124984846
04218 Cellular senescence
124984846
09150 Organismal Systems
09159 Environmental adaptation
04710 Circadian rhythm
124984846
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
124984846
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncar04121
]
124984846
03036 Chromosome and associated proteins [BR:
ncar03036
]
124984846
Ubiquitin system [BR:
ncar04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
124984846
Chromosome and associated proteins [BR:
ncar03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
124984846
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_TEP1_C
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
WDR55
Beta-TrCP_D
EIF3I
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
F-box-like
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_IP5PC_F
Beta-prop_DCAF12
Beta-prop_DCAF4
F-box
Beta-prop_IFT140_1st
WD40_like
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_Nup120_160
Beta-prop_WDR19_1st
Beta-prop_WDR11_2nd
Beta-prop_VPS8
Beta-prop_WDR35_TULP_N
F-box_5
WD40_2
DUF4508
Motif
Other DBs
NCBI-GeneID:
124984846
NCBI-ProteinID:
XP_047408878
LinkDB
All DBs
Position
5:149988749..150169837
Genome browser
AA seq
605 aa
AA seq
DB search
MDPAEAVLQEKALKFMCSMPRSLWLGCSSLADSMPSLRCLYNPGTGALTAFQNSSEREDC
NNGEPPRKIIPEKNSLRQTYNNCARLCLNQETVCLASTAMKTENCVAKTKLANGTSSMIV
PKQRKLSASYEKEKELCVKYFEQWSESDQVEFVEHLISQMCHYQHGHINSYLKPMLQRDF
ITALPARGLDHIAENILSYLDAKSLCAAELVCKEWYRVTSDGMLWKKLIERMVRTDSLWR
GLAERRGWGQYLFKNKPPDGNAPPNSFYRALYPKIIQDIETIESNWRCGRHSLQRIHCRS
ETSKGVYCLQYDDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERVIITGS
SDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRR
VLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVV
SGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPR
APAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIWDFLNDPATQAEPPRSPSRTY
TYISR
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggacccggccgaggcggtgctgcaggagaaagcgctcaagtttatgtgctctatgccc
aggtctctgtggctgggctgctccagcctggcggacagcatgccttcgctgcgatgcctg
tataacccagggactggcgcactcacagctttccagaattcctcagagagagaagactgt
aataatggcgaaccccctaggaagataataccagagaagaattcacttagacagacttat
aacaactgtgccagactctgcttaaaccaagaaacagtatgtctagcaagtactgctatg
aagactgaaaattgtgtggccaaaacaaaacttgccaatggcacttccagtatgattgta
cccaagcaacggaaactctctgcaagctatgaaaaagaaaaggaactgtgtgtcaaatat
tttgagcagtggtcagagtccgatcaagttgaatttgtggaacatcttatatcccaaatg
tgtcattaccaacatgggcacataaactcatatcttaaacctatgctacaaagggatttc
ataactgctctgccagctcggggattggatcatattgctgagaacattctgtcatacttg
gatgccaaatcactctgtgctgctgaacttgtgtgcaaagaatggtaccgagtgacgtcg
gatggcatgttatggaagaagctcatcgagagaatggtcaggacagattctctgtggaga
ggcctggcagaacgaagagggtggggacagtatttattcaaaaacaaacctcctgatggg
aatgctcctcccaactctttttatagagcactttatcctaaaattatacaagacattgag
acaatagaatctaattggagatgtggaagacatagtttacagagaatccactgccggagt
gaaacaagcaaaggagtttactgtttacagtatgatgaccagaaaatagtaagcggcctt
cgagacaacacaatcaagatctgggataaaagcacactggaatgcaaacgaattctcaca
ggccacacaggttctgtcctgtgtctccagtatgacgagagggtgatcataactggatca
tcggattccactgtcagagtatgggatgtaaatacaggtgaaatgctaaacacgttgatt
caccattgtgaagcagttctgcacttacgtttcaataatggcatgatggtgacctgctcc
aaagatcgttccattgctgtgtgggatatggcctccccaactgatattaccctccggagg
gttctggttggacaccgagctgctgtcaatgttgtagactttgatgacaagtatatcgtt
tctgcatctggggacagaactataaaggtgtggaacacaagtacttgtgaatttgtaagg
accctaaatggacacaaacgagggattgcctgtttgcagtacagagacaggctggtggtg
agtggctcatctgacaacactatcagattatgggacattgaatgtggtgcatgtttacga
gtgttagaaggtcatgaggaattggtgcgttgtattcggtttgataacaagaggatagtc
agtggggcctatgatggaaaaattaaagtgtgggatcttgtggctgctttggaccctcgt
gctcctgcagggactctctgtctacggacccttgtggagcattctggaagagttttccga
ctccagtttgatgaattccagattgtcagtagttcacatgatgacacaatcctcatctgg
gacttcctaaatgatccagctacccaagctgagcccccccgctccccttctcgaacatac
acctacatctccagataa
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