Sciurus carolinensis (gray squirrel): 124984856
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Entry
124984856 CDS
T08117
Name
(RefSeq) LOW QUALITY PROTEIN: sister chromatid cohesion protein PDS5 homolog B-like
KO
K11267
sister chromatid cohesion protein PDS5
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
124984856
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ncar03036
]
124984856
Chromosome and associated proteins [BR:
ncar03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
124984856
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDS5
PI-TkoII_IV
Motif
Other DBs
NCBI-GeneID:
124984856
NCBI-ProteinID:
XP_047408901
LinkDB
All DBs
Position
5:28964221..29158175
Genome browser
AA seq
1449 aa
AA seq
DB search
MAHSKTRTNDGKITYPPGVKEISDKISKEEMVRRLKMVVKTFMDMDQDSEEEKELYLNLA
LHLASDFFLKHPDKDVRLLVACCLADIFRIYAPEAPYTSPDKLKDIFMFITRQLKGLEDT
KSPQFNRYFYLLENIAWVKSYNICFELEDSNEIFTQLYRTLFSVINNGHNQKVHMHMVDL
MSSIICEGDTVSQELLDTVLVNLVPAHKNLNKQAYDLAKALLKRTAQAIEPYITNFFNQV
LMLGKTSISDLSEHVFDLILELYNIDSHLLLSVLPQLEFKLKSNDNEERLQVVKLLAKMF
GAKDSELASQNKPLWQCYLGRFNDIHVPIRLECVKFASHCLMNHPDLAKDLTEYLKVRSH
DPEEAIRHDVIVSIVTAAKKDILLVNDHLLNFVRERTLDKRWRVRKEAMMGLAQIYKKYA
LQSAAGKDAAKQISWIKDKLLHIYYQNSIDDRLLVERIFAQYMVPHNLETTERMKCLYYL
YATLDLNAVKALNEMWKCQNLLRHQVKDLLDLIKQPKTDASVKAIFSKVMVITRNLPDPG
KAQDFMKKFTQVLEDDEKIRKQLEVLVSPTCSCKQAEGCVREITKKLGNPKQPTNPFLEM
IKFLLERIAPVHIDTESISALIKQVNKSIDGTADDEDEGVPTDQAIRAGLELLKVLSFTH
PISFHSAETFESLLACLKMDDEKVAEAALQIFKNTGSKIEEDFPHIRSALLPVLHHKSKK
GPPRQAKYAIHCIHAIFSSKETQFAQIFEPLHKSLDPSNLEHLITPLVTIGHIALLAPDQ
FAAPLKSLVATFIVKDLLMNDRLPGKKTTKLWVPDEEVSPETMVKIQAIKMMVRWLLGMK
NNHSKSGTSTLRLLTTILHSDGDLTEQGKISKPDMSRLRLAAGSAIVKLAQEPCYHEIIT
LEQYQLCALAINDECYQVRQVFAQKLHKGLSRLRLPLEYMAICALCAKDPVKERRAHARQ
CLVKNINVRREYLKQHAAVSEKLLSLLPEYVVPYTIHLLAHDPDYVKVQDIEQLKDVKEC
LWFVLEILMAKNENNSHAFIRKMVENIKQTKDAQGPDDAKMNEKLYTVCDVAMNIIMSKS
TTYSLESPKDPVLPARFFTQPDKNFSNTXNYLPPEMKSFFTPGKPKTTNVLGAVNKPLSS
AGKQSQTKSSRMETVSNASSSSNPSSPGRIKGRLDSSEMDHSENEDYTMSSPLPGKKSDK
RDDSDLVRSELEKPRSRKKNPVTDPEEKLGMDDLTKLVQEQKPKGNQRGRKRGHTASESD
EQQWPEEKRLKEDLLENEDEQNSPPKKGKRGRPPKPLGGGTPKEEPTMKTSKKGNKKKSG
PPTAEEEEEEDRQSGNTEQKSKSKQHRVSRRAQQSRAESPETSAVESTQSTPQKGRGRPS
KTPSPSQPKKNVRVGRSKQAATKENDSSEEVDVFQGSSPVNDDIPQDETEEEEVSAVNVR
RRSSKRERR
NT seq
4350 nt
NT seq
+upstream
nt +downstream
nt
atggctcattcaaagacaaggaccaatgatggaaaaattacttatcctcctggtgtcaag
gaaatctcagataaaatatctaaagaggagatggtgagacggttaaagatggttgtgaaa
actttcatggatatggaccaggactctgaagaagaaaaggagctttatctaaacctagct
ttacatcttgcttcagattttttccttaagcatcctgataaagatgttcgtttactagtg
gcctgctgccttgccgatattttcaggatttatgctcctgaagctccttatacatcccct
gataaactaaaggatatatttatgtttataacaaggcagttgaagggattagaggatacg
aagagcccacaattcaataggtatttttatttacttgagaacattgcttgggtcaaatca
tataacatatgctttgaattagaagatagcaatgaaatttttacccaactatacagaaca
ttattttcagttataaacaatggacacaatcagaaggttcatatgcacatggtagacctc
atgagctctattatttgtgaaggtgatacagtatctcaggagcttttggacacagtttta
gtaaatctggtgcctgcccataagaatttaaacaagcaagcatatgatttggcaaaggct
ttactgaagaggacagctcaagctattgaaccatatattaccaatttttttaatcaggtt
ctgatgcttgggaaaacatctatcagtgatttgtcagaacatgtgtttgacttaattttg
gagctctacaatattgatagtcacttgctgctctctgttttaccccagcttgagtttaaa
ttaaagagcaatgataatgaggaacgactccaagttgttaaactattagcaaaaatgttc
ggggcaaaggattcagagttggcttctcaaaacaaaccactttggcagtgctacttgggc
aggtttaatgatatccatgtaccaatccgcctggaatgtgtgaaatttgctagtcattgt
ctcatgaaccatcctgatttagcaaaggatttaacagaatatcttaaagtgaggtcacat
gaccctgaggaagctattagacatgatgttattgtgtctatagttacagctgctaaaaag
gatattcttctggtcaatgatcacttacttaattttgtgagagagagaacattagataaa
cggtggagagtgcgcaaagaagccatgatgggactggctcaaatttataagaagtatgct
ttacaatcagcagctggaaaagatgctgcaaaacagatatcgtggatcaaggacaaattg
ctacatatatattaccaaaatagtattgatgatcgattacttgttgaacgaatctttgct
caatacatggttccccacaatctggaaactacagaacggatgaagtgcttgtattactta
tatgccacactggatttaaatgctgtgaaagcattgaatgaaatgtggaaatgtcaaaat
ctgctccgacatcaagtaaaggatttgcttgacttaattaagcaacctaaaacagatgcc
agtgtcaaggccatattttcaaaagtgatggttattacaagaaatttgccagatcctggt
aaggctcaggatttcatgaagaaattcacacaagtgttagaagatgatgagaaaataagg
aaacaattagaagtacttgttagtccaacatgctcctgcaaacaggctgaaggttgtgtg
cgtgaaataactaagaagttgggcaaccctaaacagcctacaaatcctttcctggaaatg
atcaagtttctcttggagaggatagcacctgtgcacatagatactgaatctatcagtgct
cttatcaagcaagtgaacaaatcaatagatggaacagcagatgatgaagatgagggtgtt
ccgactgatcaagctatcagggcaggtttggaactgcttaaggtcctctcatttacacat
cctatctcattccattctgctgaaacatttgaatcacttctggcttgtcttaaaatggat
gatgaaaaagtagcagaagctgcactgcaaattttcaaaaatacaggaagcaaaattgaa
gaggatttcccacacattagatcagccttgcttcctgttttacatcacaaatctaaaaaa
ggaccccctcgtcaagccaaatatgccattcactgtatccatgcgatattttctagtaaa
gagacccagtttgcacagatatttgagcctctgcataagagcctagacccaagcaacctg
gaacatcttataacaccactggttactattggtcatattgctcttcttgcacctgatcag
tttgctgctcctttgaagtctttggtagctactttcattgtgaaagatcttctcatgaat
gatcggcttccaggaaaaaagacaactaaactttgggttccagatgaagaagtttctcct
gagacaatggtcaaaattcaggctattaaaatgatggttcgatggctacttggaatgaaa
aataatcacagtaaatcaggaacttctaccttaagattgctaacaacaatattgcacagt
gatggagacttgacagagcaggggaaaattagcaaaccagatatgtcacgtctgaggctt
gctgctggaagtgctatcgtgaagctggcacaagaaccctgctaccatgaaatcatcaca
ttagaacagtatcagttatgtgcattagctatcaatgatgaatgctatcaagtaagacaa
gtgtttgctcagaaacttcacaaaggcctttcccgattacggcttccacttgagtatatg
gcaatctgtgcactttgtgctaaagatcctgtaaaagagagaagagctcatgctagacag
tgtctagtaaaaaatataaatgtaagacgagagtatctgaagcaacatgcagctgttagt
gaaaaattattgtctcttctaccagagtatgttgttccatatacaattcaccttttggca
catgacccagattatgtcaaagtacaggatattgaacaacttaaagatgttaaagaatgt
ctttggtttgttctggaaatattaatggctaaaaatgaaaataacagtcatgcatttatc
agaaaaatggttgaaaatattaaacaaacaaaagatgcccaaggaccagatgatgcaaaa
atgaatgaaaagctatacactgtgtgtgatgttgccatgaatatcatcatgtcaaagagc
accacatacagtttggaatctcctaaagacccagtactaccagctcgttttttcacccaa
cctgataagaatttcagtaacaccnaaaattacctgcctccagaaatgaaatcgtttttc
actcctggaaaacctaaaacaaccaatgttctaggagctgttaataagccactttcatca
gcaggcaaacaatctcagaccaaatcatcacgaatggaaactgtaagcaatgcaagcagc
agctcaaatccaagctctcctggaagaataaaagggaggcttgatagttctgaaatggat
cacagtgaaaatgaagattacacaatgtcttcacctttgccggggaaaaaaagtgacaag
agagacgactctgatcttgtaaggtctgaattagagaagcctagaagccggaaaaaaaac
cctgtcacagatccagaggagaagttaggtatggatgacctgactaagttggtacaagaa
cagaaacccaaaggcaatcagcgaggccggaaaagaggccatacagcttcagaatcagat
gaacagcagtggcctgaggagaaaaggctcaaagaagatctattagaaaatgaggatgaa
cagaacagtccgcctaaaaaggggaaaagaggccggccaccaaaacctcttggtggaggt
acaccaaaagaagagccaacaatgaaaacttctaaaaaaggaaacaaaaaaaaatctgga
cctcccacagcagaggaagaggaagaagaagatagacaaagtggaaatacagaacagaag
tcaaaaagcaagcagcaccgagtatcaaggagagcacagcagagcagagcagaatctcct
gaaactagtgcagttgaatccacacaatccacaccacagaaaggacgaggaagaccatca
aaaacgccatcaccatcacaacctaaaaaaaatgtccgtgtaggacgctccaagcaagca
gctactaaagaaaatgattcaagtgaagaagtagatgtgtttcagggtagctctcctgtc
aatgatgatattccacaggatgaaacagaggaagaggaagtttctgcagtaaatgtacgg
cggagaagttctaaaagggaaaggcgatga
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