Sciurus carolinensis (gray squirrel): 124984863
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Entry
124984863 CDS
T08117
Name
(RefSeq) protein transport protein Sec24C isoform X1
KO
K14007
protein transport protein SEC24
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
124984863
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124984863
Membrane trafficking [BR:
ncar04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
124984863
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
124984863
NCBI-ProteinID:
XP_047408905
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Position
5:124781912..124807316
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AA seq
1118 aa
AA seq
DB search
MNVNQSAPPVPPFGQPQPIYPGYHQSSYGGQPGTTAPPTPYGTYNGPVPGYQQTLPQGVS
RAPPSSGAPPVSTAQSPCGQAAYGQFGQGDVQNGPSSTVQMQRLPGSQPFGSPLAPVVSQ
PAVLQPYGPPPTSAQVTAQLAGMQISGAMAPAPPPSGLGYGPPTSLASASGSFPNSGPYG
AYPQGQAPSLSQAQSHPGVQPPQRSAPPLASSFTPPASGGPRMPSMTGPLLPGQGFGGPP
VSQPNHVSSPPPQALPPGPQMTGPPGPPPPMHSSQQPGYQLQQNGSFGPTRGPQPNFGSP
YPGAPTFGSQPGPPQPLPPKRLDPDAIPSPQLNELPPQQKTRHRIDPDAIPSPIQVIEDD
RNNRGSEPFVTGVRGQVPPLVTTNFLVKDQGNASPRYIRCTSYNIPCTSDMAKQAQVPLA
AVIKPLARLPPEEASPYVVDHGESGPLRCNRCKAYMCPFMQFIEGGRRFQCCFCSCINDV
PPQYFQHLDHTGKRVDAYDRPELSLGSYEFLATVDYCKNNKFPSPPAFIFMIDVSYNAIR
TGLVRLLCEELKSLLDYLPREGGAEESAIRVGFVTYNKVLHFYNVKSSLAQPQMMVVSDV
ADMFVPLLDGFLVNVNESRAVITSLLDQIPEMFADTRETETVFAPVIQAGMEALKAAECA
GKLFLFHTSLPIAEAPGKLKNRDDRKLINTDKEKTLFQPQTGAYQTLAKECVAQGCCVDL
FLFPNQYVDVATLSVVPQLTGGSVYKYACFQVENDQERFLSDLRRDVQKVVGFDAVMRVR
TSTGIRAVDFFGAFYMSNTTDVELAGLDGDKTVTVEFKHDDRLNEESGALLQCALLYTSC
AGQRRLRIHNLALNCCTLLADLYRNCETDTLINYMAKFAYRGVLNSPVKTVRDTLITQCA
QILACYRKNCASPSSAGQLILPECMKLLPVYLNCVLKSDVLQPGAEVTTDDRAYVRQLVT
SMDVAETNVFFYPRLLPLTKSPIESTTEPPAIRASEERLSNGDIYLLENGLNLFLWVGAS
VQQGVVQSLFNVPSFSQITSGLSVLPVLDNPLSKKVRGLIDSLRAQRSRYMKLIVVKQED
KLEMLFKHFLVEDKSLSGGASYVDFLCHMHKEIRQLLS
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtgaaccagtcagctccacctgtgccgccatttgggcagccccagcccatctat
ccagggtatcaccagtccagttatggtgggcaaccagggaccacagcacccccaactccc
tatggaacctataatggcccggtgccaggctatcagcaaactcttccccaaggtgtgtca
agagccccaccctcctcaggggcacctccagtctctacagcacagtccccatgtggccag
gctgcatatggccagtttggccaaggtgatgtacagaatggtccaagctccactgttcag
atgcaaagactccctgggtctcagccatttgggtccccattggcccctgttgtcagccag
ccagctgtgcttcagccctatggccctcctccgacaagtgcacaggtgactgcacagctg
gctggaatgcagatcagtggtgctatggctccagcccctcccccttcagggctgggttat
ggcccaccaacatcgctggcctcagcctcaggaagtttccctaactctggtccatatggc
gcctatcctcagggccaggctccttcccttagccaggcccaaagtcatccaggggtccag
cctccccagcgatctgccccaccactggcctccagcttcacacccccagcttcagggggt
cctcggatgccttctatgactggtccactcctgcctggacagggttttggggggccccca
gtgagccagcccaaccatgtatcctcacctcctcctcaagctctgccccctggcccccag
atgactgggcccccaggacccccgccacctatgcactcctcccagcagccgggctatcag
ctgcaacaaaatggttcctttggaccaacccggggccctcagcccaattttggaagcccc
taccctggagcacccacttttggcagtcaacctgggcctcctcaaccactgcctcctaag
cgcctggaccctgatgccatccccagtcctcaactcaatgagctgcctcctcagcagaaa
accaggcacagaatagatcctgatgccattcctagtccaattcaggtcattgaagatgac
aggaacaaccggggttcagagccatttgttactggtgtacggggccaggtgccaccttta
gtcaccaccaacttcctggtgaaagaccaagggaatgcaagtccccgatacatccgatgc
acatcctataatatcccttgcacatctgacatggcaaagcaggctcaggtgcccctggca
gctgtcatcaagccactggcaaggctgcccccagaggaggcttcaccatatgttgtggac
catggggaatctggccctttacgctgcaatcgctgtaaagcatacatgtgccccttcatg
cagttcatcgagggagggaggcgcttccaatgctgcttttgcagctgtatcaatgatgtt
cccccccagtattttcaacatctggatcataccggcaaacgtgtggatgcttatgaccgt
cctgagctatctctgggctcttatgaattcttggccactgtagattactgcaagaataat
aagtttcccagccctcctgccttcatcttcatgattgatgtctcctacaatgccatcagg
actggtcttgttaggctcctctgtgaggagctcaagtcactgttagactacctacctagg
gagggcggggcagaagaatcagcaatccgcgttggctttgtcacctacaataaggtgctt
catttctacaatgtgaagagttcattggcccaaccacagatgatggttgtatctgatgtg
gctgacatgtttgtgccactcctggatggcttcctagtcaatgtcaatgagtctcgggca
gtcatcaccagcttattggatcagattccagaaatgttcgcagacacaagagagacagag
acagtatttgcaccagttatccaggctgggatggaggctttgaaggctgctgagtgtgca
gggaagctgtttctgttccatacatccttacccattgcagaggctccagggaagctgaag
aacagagatgacaggaaattgatcaacacagacaaagagaagactctgttccagccccag
acaggtgcctatcagactctggccaaagagtgtgtggcccaaggctgctgtgtagacctc
tttctcttccctaaccagtatgtggatgtggccacgctctctgttgtgccccagctcact
ggtggctctgtctacaaatacgcttgctttcaggtggagaatgatcaggaacggttcctg
agtgacctgcgtcgtgatgtacagaaggttgttggctttgatgctgtgatgcgggtccgg
acaagcactggtatccgtgctgtagatttctttggagcattctacatgagcaacacaaca
gatgtggagctggctggactggatggggacaagacagtgactgtggagttcaagcatgat
gatcggcttaatgaagagagtggagcactcctgcagtgtgctctgctttataccagctgt
gcagggcagcgtcggctccgcatccacaacctggcactgaactgctgcaccctgctagct
gatctgtatcggaactgtgagactgacacacttatcaactacatggcaaagtttgcatac
cggggtgtcctgaacagccctgtgaagactgtgcgtgacactcttatcacccagtgtgcc
cagatcctagcctgttacagaaagaattgtgccagcccctcctctgcaggacagttgatc
cttcctgagtgcatgaagctactcccagtttacctgaactgtgtgttgaagagtgatgtc
ctgcaacctggagctgaagtcacaactgatgaccgtgcctatgttcgacagctggttacc
tctatggatgtggctgagaccaatgtcttcttctatcctcgtctcctgccattgacaaag
tctcccattgagagtaccactgaaccaccagcaattcgggcatctgaagaacgtctaagc
aatggggatatatatttgttggagaatgggctcaacctcttcctctgggtgggagccagt
gtccaacagggtgttgtccagagccttttcaacgtcccttccttcagtcagatcaccagt
ggcttgagtgttctgccagttctggataatccactgtccaagaaggttcgaggcctcatt
gatagcttaagggcacagagatcgcggtacatgaagcttatcgtggtgaagcaagaggat
aagctggagatgctgttcaagcactttctggtggaagacaagagcctgagcgggggagca
tcctatgtggactttctctgtcatatgcacaaggagattcggcagctactgagctaa
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