Sciurus carolinensis (gray squirrel): 124984869
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Entry
124984869 CDS
T08117
Name
(RefSeq) VPS10 domain-containing receptor SorCS1 isoform X1
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124984869
Membrane trafficking [BR:
ncar04131
]
Protein recycling
Others
Others
124984869
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
124984869
NCBI-ProteinID:
XP_047408916
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Position
5:complement(154588074..155058919)
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AA seq
1179 aa
AA seq
DB search
MGKVGAGGGSPARLSALLAGAGLLVLCAPGACSSGSCCPPPHPSSAPRWTTTPGGFFHQG
PPGRAPATPLPLLVRPLFAVAPGDRALSLERARGTRASVSVATRSSRRRRSGAVQEKAER
VEGSSRSPRGVLRDGGQPELGTRERDPDKATRFRMEELRLTSTTFALTGDSAHNQAMVHW
SGHNSSVILILTKLYDYNLGSITESSLWRSTDYGTTYEKLNDKVGLKTILSYLYVCPTNK
RKIMLLTDPEIESSLLISSDEGATYQKYRLNFYIQSLLFHPKQEDWILAYSQDQKLYSSA
EFGRRWQLIQEGVVPNRFYWSVMGSNKEPDLVHLEARTVDGHSQYLTCRMQNCTETNKNK
PFPGYIDPDSLIVQDDYVFVQLTSGGRPHYYVSYRRNAFAQMKLPKYALPKDMHVISTDE
NQVFAAVQEWNQNDTYNLYISDTRGVYFTLALENVQSSRGPEGNVMIDLYEVAGIKGMFL
ANKKIDNQVKTFITYNKGRDWRLLQAPDTDLRGDPVHCLLPYCSLHLHLKVSENPYTSGI
IASRDTAPSIIVASGNIGSELSDSDISMFVSSDAGNTWRQIFEEEHSVLYLDQGGVLVAM
KHTSLPIRHLWLSFDEGRSWSKYSFTSIPLFVDGVLGEPGEETLIMTVFGHFSHRSEWQL
VKVDYKSIFDRRCAEEDYRPWQLHSQGEACIMGAKRIYKKRKSERKCMQGKYAGAMESEP
CVCTEADFDCDYGYERHSNGQCLPAFWFNPSSLSKDCSVGQSYLNSTGYRKVVSNNCTDG
VREQYTAKPQKCPGKAPRGLRIVTADGKLTAEQGHNVTLMVQLEEGDVQRTLIQVDFGDG
IAVSYVNLSSMEDGIKHVYQNVGIFRVTVQVDNSLGSDSAVLYLHVTCPLEHVHLSLPFV
TTKNKEVNATAVLWPSQVGTLTYVWWYGNNTEPLITLEGSISFKFTSEGMNTITVQVSAG
NAILQDTKTIAVYEEFRSLRLSFSPNLDDYNPDIPEWRRDISRVIKKSLVEATGIPSQHI
LVAVLPGLPTAAELFVLPYQDPTGENKRSLEDLEQISEVLIHKLNQNSVHFELKPGVQVL
VHAAHLTAAPLVDLTPTHSGSAMLMLLSVVFVGLAVFVIYKFKRKIPGINVYAQMQNEKE
QEMISPVSHTENRPNIPQTELRRPGLLRDEKVESQLVGE
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaagttggcgccggcggcggctccccagcccggctgagcgcgcttctcgccggc
gcggggcttttggtcctctgcgccccgggcgcctgcagcagcggctcttgctgccctcca
ccgcaccccagctcggccccacgctggaccacgaccccagggggctttttccaccagggg
ccgccaggcagggctcctgccacgcccctgccgctccttgtgcgccccctgtttgcagtg
gcccccggggaccgagcgctgtccctggagcgggcccggggcacccgggcgtcggtgtcg
gttgctacacgctccagccgaaggagacggagcggagcggttcaggagaaggcagaaagg
gtagagggatccagtaggagcccccggggagtactgagggatggagggcagccggagctt
gggactcgggagcgggacccggacaaagccacccgcttccggatggaggagctgagactg
accagcaccacgtttgcgctgacaggcgactccgcacacaaccaagctatggtccactgg
tccggccacaacagcagtgtgattctcattttgacaaagctctatgactataacctgggg
agcatcacggagagctcactttggaggtcaactgattatgggacaacctatgagaagctg
aatgataaagtgggtttgaagacaatcttgagctatctctacgtgtgtcctaccaacaag
cgtaagatcatgttactcacagacccggagattgagagcagtttattgatcagctcagat
gaaggggcaacttatcaaaagtaccgactgaacttttacatccagagcttgcttttccac
ccgaagcaagaagactggattctggcgtacagtcaagaccaaaagttatacagctcggct
gagtttgggagaagatggcagcttatccaggaaggggtggtaccaaataggttctactgg
tctgtgatggggtcgaacaaggaaccagaccttgtgcatcttgaggccagaactgtggat
ggtcattcacaatatcttacttgccgcatgcagaactgcacggaaaccaacaaaaataaa
cctttcccaggctacattgacccagactctttgattgtccaggatgattacgtgtttgtt
cagctgacgtcaggaggaagaccacattactacgtgtcttaccgaaggaatgcgtttgcc
cagatgaagcttccgaaatacgctttgcccaaggacatgcacgtcattagcacagatgag
aaccaagtgtttgcagcagtccaagaatggaaccagaacgacacctacaacctctatatc
tcagacacccgtggggtctatttcaccttggccttggagaatgtccagagcagcagaggc
cctgagggtaacgtcatgatcgacctctatgaggtagcagggataaagggaatgttcttg
gctaacaagaagattgacaaccaagtgaagaccttcatcacatacaacaaaggcagagac
tggcgtttgctgcaggctccggacacagatctcagaggggaccctgtgcattgcttgctg
ccctattgctcactccaccttcacctgaaggtatctgagaatccctacacatcagggatc
attgccagcagagacacagctccaagcatcatcgttgcttcaggtaatataggttccgaa
ctgtcagacagtgacatcagcatgtttgtctcttcagatgcagggaatacttggaggcag
atctttgaagaggagcacagtgttttgtacctagatcaaggtggagtcctggttgccatg
aaacacacttctcttccaattcgacatctttggttgagtttcgatgaagggagatcttgg
agcaaatacagtttcacatctattccactttttgtggacggggttctgggtgaacctgga
gaagaaactctaatcatgacagtgtttggacacttcagccaccgctctgaatggcagctg
gttaaagtagactacaagtccatttttgacagacggtgtgctgaggaggactacaggccc
tggcagctacacagccagggggaagcatgtatcatgggagccaagaggatatacaagaag
cgaaaatcagagcggaagtgtatgcaaggaaaatacgcaggagctatggaatctgaaccc
tgcgtttgcacagaggctgattttgactgtgactatggctatgagcgacacagcaatggg
cagtgcctgccagctttttggttcaatccatcttctctgtcaaaggactgcagtgtgggg
cagagttacctcaatagtactgggtatagaaaggtggtttccaataactgcactgatgga
gtacgggaacagtacactgccaaaccccagaagtgtcctgggaaggcccctcgtgggctc
cggatcgtcactgcggatgggaagctgactgcagagcaagggcacaatgtcactctcatg
gtgcagctggaagagggtgatgtccagcggacgcttatccaagtggactttggcgatggc
atcgcagtgtcttatgtcaacctcagctccatggaagatgggatcaaacacgtctatcag
aacgtgggcattttccgagtgaccgtgcaggtggacaacagtctggggtctgacagcgcc
gtcctgtacttacatgtaacttgtcccctggagcatgtgcacctgtctcttccctttgtc
accacaaagaacaaagaagtcaatgcaactgctgtgctgtggcccagccaagtgggcacc
ctcacttacgtgtggtggtacggaaacaacacggagcccttgatcaccttggagggaagc
atatcattcaaatttacttcagaaggaatgaataccatcacagtgcaggtatctgctgga
aacgccatcctgcaggatacgaagaccatagcagtatatgaggaattccgttctcttcgc
ttgtccttttctccaaacctggatgattacaacccggacattcccgagtggaggagggac
atcagcagagtcatcaaaaaatccctggtggaagccacaggaattccaagccagcacatc
ctggtggcagtactgcctggcttacccaccgctgctgagctctttgtcttgccttatcag
gatccaacaggagaaaacaaaaggtcactggaggatctggagcagatctcagaagtattg
atccataagctcaatcaaaactcagtgcactttgagctgaagcctggggtccaagttctg
gtccatgctgctcatctaacagcagccccactggtggacctcactccaacccacagtggt
tccgccatgttgatgctgctctcggtggtgtttgtggggctggccgtgttcgtcatctac
aagtttaaaaggaagatcccggggattaatgtttatgcccagatgcagaatgaaaaagaa
caagagatgatcagtccagtcagtcacactgaaaacaggcccaatatccctcagactgaa
ctaaggaggcctggcctgcttagagatgagaaggtggaatcacagctcgtaggagagtag
DBGET
integrated database retrieval system
