Sciurus carolinensis (gray squirrel): 124984881
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Entry
124984881 CDS
T08117
Name
(RefSeq) VPS10 domain-containing receptor SorCS3
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124984881
Membrane trafficking [BR:
ncar04131
]
Endocytosis
Others
Others
124984881
Endosome - Lysosome transport
124984881
Endosome - Golgi transport
124984881
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
124984881
NCBI-ProteinID:
XP_047408940
LinkDB
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Position
5:152768119..153352777
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AA seq
1219 aa
AA seq
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MEAARTERPTGWPGAPLARTGLLLLSTWVLAGAEITWGSTGGPGRLTAPASRSPALPPFL
PRAVANQWPEELATARRPAALGRRPRPELLPQPRGVEMQVEVEGTSPEGARRVRGSPAPG
KPGGSKRSRRAQPPSALERGDARATASAEGSKGSRPPAKGSREEGKVPRPGGPAAEELRL
PSTSFALTGDSAHNQAMVHWSGHNSSVILILTKLYDFNLGSVTESSLWRSTDYGTTYEKL
NDKVGLKTVLSYLYVNPTNKRKIMLLSDPEMESSILISSDEGATYQKYRLTFYIQSLLFH
PKQEDWVLAYSLDQKLYSSMDFGRRWQLMHERITPNRFYWSVAGLDKEADLVHMEVRTAD
GYAHYLTCRIQECAETTRSGPFARSIDISSLVVQDEYIFIQVTTGGRASYYVSYRREAFA
QIKLPKYSLPKDMHIISTDENQVFAAVQEWNQNDTYNLYISDTRGIYFTLAMENIKSSRG
LMGNIIIELYEVAGIKGIFLANKKVDDQVKTYITYNKGRDWRLLQAPDVDLRGSPVHCLL
PFCSLHLHLQLSENPYSSGRISSKETAPGLVVATGNIGPELSYTDIGVFISSDGGNTWRQ
IFDEEYNVWFLDWGGALVAMKHTPLPVRHLWVSFDEGHSWDKYGFTLLPLFVDGALVEAG
VETHIMTVFGHFSLRSEWQLVKVDYKSIFGRRCTKEDYQTWHLLNQGEPCVMGERKIFKK
RKPGAQCALGRDYSGSVVSEPCVCADWDFECDYGYERHGESQCVPAFWYNPASPSKDCSL
GQSYLNSTGYRRIVSNNCTDGLRDKYSAKAQLCPGKAPRGLHVVTTDGRLVAEQGHNATF
IILMEEGDLQRTNIQLDFGDGIAVSYANFSPIEDGIKHVYKSAGIFQVTAYAENNLGSDT
AVLFLHVVCPVEHVHLRVPFVAIRNKEVNISAVVWPSQLGTLTYFWWFGNSTKPLITLDS
SISFTFLAEGTNTITVQVAAGNALIQDTKDIAVHEYFQSQLLSFSPNLDFHNPDIPEWRQ
DIGNVIKKALVKVTSVPEDQVLVAVFPGLPTSAELFILPPKNLTERRKGHEGDLEQIVET
LFNALNQNLVQFELKPGVQVIVYVTQLTLAPLVDSSAGHSSSAMLMLLSVVFVGLAVFLI
YKFKRKIPWINIYAQVQHDKEQEMIGSVSQSENAPKITLSDFTEPEELLEKELDTRVLGG
IATIANSESTKEIPNCTSV
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggcgcgcaccgagcgccccactggctggccgggggcgcccctcgcccggaca
gggcttctactcctgtcaacgtgggtccttgctggtgctgagatcacttggggctcaacg
ggcggtcccgggcgcctcacggctcctgcttctcggtcgccggcattgcctcctttcttg
ccgcgggcagtggcgaaccagtggccggaggagctggcgacagcgcggagacccgccgcg
ctggggcgccggcccagaccagaactgctgccccagccgcggggcgttgagatgcaggtt
gaagtcgagggtacgtctcctgaaggcgcgcggagggtccggggcagcccagctcctggc
aagcctggcggctcgaagaggagtcgccgggcacagccccccagcgccctggagcgcggg
gacgcccgggctactgcttctgccgaaggttccaaaggaagccgccctccggctaagggt
tctcgggaggaggggaaggtccctcggcctgggggaccagcggcagaagagctccgactg
cccagcacctctttcgcgctgaccggggactctgcccacaaccaagcgatggtgcactgg
tcgggacacaacagcagtgtcatactgatcctgacgaagctgtacgacttcaacctgggg
agcgtgaccgagagttctctttggcggtcaacagattacggtaccacctatgaaaagctg
aatgacaaagtgggtttaaagactgtcctcagttacctctacgtcaatcccactaacaaa
agaaagatcatgcttcttagtgatcctgaaatggaaagcagcatactgatcagctcagac
gaaggggccacctatcaaaagtaccgcctcaccttctacatccagagcctgctctttcat
cccaagcaagaggactgggtgctggcctacagtttggatcaaaagctctacagctccatg
gactttggaagacggtggcagctcatgcatgaacgcatcacacccaacaggttttattgg
tctgttgccggattggataaggaggcggacctggtgcacatggaggtgcggactgcggat
ggatatgctcactacctcacctgcaggatccaggagtgtgctgagacaactcggagtggc
ccctttgcccgctccattgacatcagctctctggttgtccaggatgaatatatcttcatt
caggtaacaacaggtggaagagccagttactatgtgtcctatcgaagagaggcctttgcc
cagataaagctgcccaagtactccttgccgaaggacatgcacatcatcagtacagatgag
aaccaagtgtttgctgcagtccaagaatggaaccagaacgacacctacaatctctacatc
tcagacacccgtgggatctactttaccctggctatggagaacattaaaagcagccgaggt
ctaatgggaaacatcattattgaattgtatgaggtagcaggtatcaaagggatattcctg
gcaaataagaaggtggatgaccaggtgaagacttacatcacatacaacaaaggcagagat
tggcgcctactacaagctccagatgtggacctgagaggaagtccagtgcactgcctgctg
cccttctgttccttacacctgcatctgcagctctcagagaatccatattcctcaggaaga
atctcgagtaaggagacagccccaggacttgtggtggccacaggcaacattggcccggag
ctctcgtatactgatattggtgtgttcatctcctctgacgggggcaacacatggagacag
atctttgatgaagagtacaatgtctggttcctagactggggtggcgccctcgtggccatg
aaacacactcctctgccagtcaggcatttgtgggtgagttttgatgagggccactcctgg
gacaagtatggcttcactttgcttcctctcttcgtggatggggctctggtggaggcagga
gtagagacccacatcatgacagtctttggccacttcagcctccgctctgaatggcagtta
gtgaaagtggactacaagtctatcttcggccggcgctgcaccaaggaggactatcagacc
tggcacctgctcaatcagggagagccttgcgtcatgggagaaaggaaaatattcaagaaa
cgcaagccaggagctcagtgtgccctgggccgagactactcagggtcagtggtctcagaa
ccctgtgtctgtgccgattgggacttcgagtgtgactatggctatgagagacatggagag
agccagtgtgtcccagctttctggtacaatccagcatccccgtcaaaggactgcagcctt
ggccagagctacctaaatagcactgggtaccggaggattgtgtccaataactgcacagat
ggactaagggacaaatactccgccaaggcccaattgtgtcccggaaaagcccctcggggc
ctccacgtggtgacgaccgatgggcgcctggtggcagagcagggacacaatgcaaccttc
atcatcctcatggaagagggtgatctacagaggacaaacatccagctcgactttggagat
gggattgctgtgtcctatgccaacttcagcccgatcgaggatggcatcaagcatgtgtac
aagagtgcggggatcttccaggtgaccgcctatgcagagaacaaccttggctcagacaca
gccgtcctcttcctgcacgtggtttgtcctgtggaacatgttcacctccgggttccattt
gttgccataagaaataaggaggtcaacatcagtgctgtcgtgtggcccagtcaactgggg
acccttacctatttctggtggttcggcaacagcacaaagcccctcatcaccttggacagc
agcatttccttcacgttcctggcagagggaaccaacaccatcactgtccaggtggctgct
gggaacgccctcatccaggacacaaaggatattgcagttcatgaatactttcagtcccaa
ctcttatccttctctccgaatctggactttcacaatcccgacattcctgagtggaggcaa
gacattggcaatgtcatcaagaaagctctggttaaagtgaccagtgtcccagaagaccag
gtcctggttgctgtgttccctggccttcccacctcagcagagcttttcatcctcccaccc
aagaacttgacagagaggaggaaaggccacgaaggggacctggaacaaattgtagagaca
ctgtttaatgctctaaaccagaacttggtccagtttgagctgaaaccgggagtccaggtc
attgtgtatgtcacacagctgacattagctccgctagtggattccagtgctggtcacagc
agctccgccatgctgatgctcctgtcagtggtgtttgtgggcctggctgtgtttctgatc
tacaagtttaaaaggaaaattccctggattaacatctatgcccaagtccaacatgacaag
gagcaggagatgatcgggtcagtgagccaaagtgaaaatgcccccaaaatcacactcagt
gacttcactgagcccgaggaactcctggaaaaagagttggacactcgggtcctaggagga
atcgccaccattgcgaacagcgaaagcacaaaggagatccccaactgcactagtgtttaa
DBGET
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