Sciurus carolinensis (gray squirrel): 124984882
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Entry
124984882 CDS
T08117
Name
(RefSeq) vacuolar protein-sorting-associated protein 36 isoform X1
KO
K12190
ESCRT-II complex subunit VPS36
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124984882
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124984882
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ncar04147
]
124984882
Membrane trafficking [BR:
ncar04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
124984882
Exosome [BR:
ncar04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
124984882
Exosomal proteins of colorectal cancer cells
124984882
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
GRAM
MA3
Xre-like-HTH
Motif
Other DBs
NCBI-GeneID:
124984882
NCBI-ProteinID:
XP_047408941
LinkDB
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Position
5:complement(36777642..36808838)
Genome browser
AA seq
386 aa
AA seq
DB search
MDRFVWTSGLLEINETLVIQQRGVRIYDGEEKIKFDAGTLLLSTHRLIWRDQKNHECCMA
IPLSHIVFIEEQAAGIGKSAKIVVHLHPAHPTKEPGPFQSSKNSYIKLSFKEHGQIEFYR
RLSEEMTQRRWENIPVSQSIQTNRGPQPGRVRAVGIVGIERKLEEKRKETDKNISEAFED
LSKLMIKAKEMVELSKSIANKIKEKQGDITEDETIRFKSYLLSMGIANPVTRETYGSGTQ
YHMQLAKQLAGILQVPLEERGGIMSLTEVYCLVNRARGMELLSPEDLVNACKMLEALKLP
LRLRVFDSGVMVIELQSHKEEEMVASALETVSEKGSLTSEEFAKLVGMSVLLAKERLLLA
EKMGHLCRDDSVEGLRFYPNLFMTQS
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggaccgcttcgtgtggaccagcggcctcctggagatcaacgagaccctggtgatccag
cagcgcggggtgcgaatctacgacggcgaggagaagataaaatttgatgctggaaccctc
cttcttagtacacaccgactgatttggagagatcagaaaaatcatgagtgctgcatggcc
attcctctgtcccacatagtattcattgaggaacaggcagctggaattgggaagagtgcc
aaaatagtggttcatctgcatccagctcatccaaccaaagaacctggcccattccagagt
agtaaaaactcctacatcaaactctccttcaaagaacatggccagattgagttttacagg
cgtttatcagaggaaatgacccagagaagatgggagaatataccagtttctcagtcgata
caaacaaatagaggaccccagccaggaagagtaagagctgtaggaattgtaggtattgaa
aggaaactggaagaaaaaagaaaagaaactgacaaaaacatttctgaggcctttgaagac
cttagcaagctaatgatcaaggctaaagaaatggtggagttatcaaaatcaattgctaat
aaaattaaagagaagcagggtgacatcacagaagatgagaccatcaggtttaagtcctac
ttgctgagcatgggaatagctaacccagtcaccagggaaacctacggctcaggaacacag
taccacatgcagctggctaaacagctggctggaatattgcaggtgcctttagaggaacga
gggggaataatgtcactcacagaggtgtactgtttagtaaaccgagctcgaggaatggaa
ctgctctcaccagaagatttagtgaatgcatgcaagatgctggaagcactgaaattacct
ctcaggctccgggtttttgacagtggtgtcatggtaattgagcttcagtcccacaaggaa
gaggaaatggtggcctcggccctggagacagtttcagaaaaaggatccctaacatcagaa
gagtttgctaagctcgtgggaatgtctgtccttctggccaaagagaggttgctgcttgca
gagaagatgggtcatctttgccgagatgactcagtagaaggcttgcggttttacccaaat
ttatttatgacacagagctaa
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