KEGG   Sciurus carolinensis (gray squirrel): 124984931
Entry
124984931         CDS       T08117                                 
Name
(RefSeq) nucleoporin p58/p45
  KO
K14307  nucleoporin p58/p45
Organism
ncar  Sciurus carolinensis (gray squirrel)
Pathway
ncar03013  Nucleocytoplasmic transport
ncar05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    124984931
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    124984931
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ncar03019]
    124984931
Messenger RNA biogenesis [BR:ncar03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     124984931
SSDB
Motif
Pfam: Nucleoporin_FG2 FapA NET2A_C PSY3 Nup49_C GAIN_ADGRA3 ASNSD1-SEP
Other DBs
NCBI-GeneID: 124984931
NCBI-ProteinID: XP_047409073
LinkDB
Position
5:complement(82046291..82085269)
AA seq 599 aa
MSTGFSFGSGTLGSTTVAAGGTGTGGGFSFGTGASSNPSVGLNFGTLGSTATPATTSAPS
GGFGTVLFGSKPATGFTLGGTNTGIATTITTGLTLGTPATTSASTTGFSLGFNKPAASAT
PFALPITSTSAGGLTLSSALTSTPAASTGFTLNNLGGTTATTTTASTGLSLGGALAGLGG
SLFQSTNTAASGLGQNALGLTLGTTAATSTAGNEGLGGIDFSSSSDKKSDKTGTRPEDSK
ALKDENLPPVICQDVENLQKFVKEQKQVQEEISRMSSKAMLKVQEDIKALKQLLSLAASG
LQRNTLNIDKLKVETAQELKNAEIALRTQKTPPGLQHENTAPADYFRILVQQFEVQLQQY
RQQIEELENHLATQANNSHITPQDLSMAMQKIYQTFVALAAQLQSIHENVKVLKEQYLGY
RKMFLGDAVDVFEARRTEAKKWQNAPRVTTGPTPFSTMPNAAAVAMAATLTQQQQPATGP
QPSLGVSFGTPFGSGIGTGLQSSGLGSSNLGGFGTSSGFGCSTTGASTFGFGATNKPSGS
LSAGFGSSSTSGFNFSNPGITASAGLTFGVSNPASAGFGTGGQLLQLKKPPAGNKRGKR
NT seq 1800 nt   +upstreamnt  +downstreamnt
atgtccacggggttctccttcgggtccgggacgctgggttccaccaccgttgcggccggt
ggtaccggcacaggcggcggtttctccttcgggactggggcgtctagcaacccttctgtg
gggctcaattttggaactctcggaagcactgccactccagcaactacatctgctccttct
ggtggttttggaactgtactctttggatctaaacctgccactgggttcacgctaggagga
acaaatacaggaatagcaacaactataactacaggattaactctgggaacaccagccact
acatctgcgtctacaactggcttcagtttgggattcaataaacctgcagcatctgccaca
ccatttgctcttcctattacttctacctcagcaggtggtctcactctttcatctgctctg
acatcaactccagcagcatccactggatttactctaaataacctgggaggaactacagcc
acaactacaactgcatcaacgggcctttctttagggggagccttagctggtttgggaggt
tcacttttccaaagtacaaacacagcagcatcaggacttgggcagaatgctttaggcctg
actttgggaactacagcagctacttcaactgcaggcaatgaaggccttggtggtatagat
tttagtagttcatcagataaaaagagtgataaaacaggaacaagaccagaggatagtaag
gcattgaaggatgaaaatctacctcctgtcatctgccaggatgttgaaaatctccagaaa
tttgtgaaggaacagaaacaagtccaagaagaaattagtagaatgtcttcaaaagcaatg
cttaaagtacaagaagatattaaagctctgaagcagcttctctcattggctgccagtgga
ttacagagaaacactcttaatattgacaaattgaaagtagaaactgctcaggagttaaag
aatgctgaaatagctttaagaacccagaaaacaccacctggccttcaacatgaaaataca
gctcctgctgactacttcagaattttggttcagcaatttgaggtacagcttcaacagtac
agacagcagattgaagaactagaaaaccatcttgccacccaagcaaataattcacatata
acccctcaagatttgtcaatggctatgcagaaaatttatcaaacatttgtagctttagct
gcgcaacttcagtctattcatgaaaatgtaaaggtactcaaagaacagtaccttggctac
agaaaaatgttcttaggagatgctgtagatgtatttgaagccaggcgaacagaagctaag
aagtggcagaatgcacccagagttactactggacccacccctttcagcaccatgccaaat
gcagcagccgttgccatggctgcaacacttacacagcagcaacagcctgctacagggcca
cagccatctctgggagttagttttggaacgccattcggctcaggtattggcactggcttg
caatcaagtggcttaggttcttcaaaccttggaggatttggaactagctctggttttgga
tgcagcaccacaggggcctccacatttggatttggagcaacaaataaaccctcaggaagt
cttagtgcaggctttggcagctcaagtacatctgggtttaacttcagcaatcctggcatc
acggcatcagctggtttgacatttggggtgtccaatcctgcctctgcaggttttggaaca
ggaggacaactccttcagttgaagaaacctccagctggaaacaaaagaggaaaaagataa

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