Sciurus carolinensis (gray squirrel): 124984931
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Entry
124984931 CDS
T08117
Name
(RefSeq) nucleoporin p58/p45
KO
K14307
nucleoporin p58/p45
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar03013
Nucleocytoplasmic transport
ncar05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124984931
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
124984931
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncar03019
]
124984931
Messenger RNA biogenesis [BR:
ncar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124984931
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG2
FapA
NET2A_C
PSY3
Nup49_C
GAIN_ADGRA3
ASNSD1-SEP
Motif
Other DBs
NCBI-GeneID:
124984931
NCBI-ProteinID:
XP_047409073
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All DBs
Position
5:complement(82046291..82085269)
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AA seq
599 aa
AA seq
DB search
MSTGFSFGSGTLGSTTVAAGGTGTGGGFSFGTGASSNPSVGLNFGTLGSTATPATTSAPS
GGFGTVLFGSKPATGFTLGGTNTGIATTITTGLTLGTPATTSASTTGFSLGFNKPAASAT
PFALPITSTSAGGLTLSSALTSTPAASTGFTLNNLGGTTATTTTASTGLSLGGALAGLGG
SLFQSTNTAASGLGQNALGLTLGTTAATSTAGNEGLGGIDFSSSSDKKSDKTGTRPEDSK
ALKDENLPPVICQDVENLQKFVKEQKQVQEEISRMSSKAMLKVQEDIKALKQLLSLAASG
LQRNTLNIDKLKVETAQELKNAEIALRTQKTPPGLQHENTAPADYFRILVQQFEVQLQQY
RQQIEELENHLATQANNSHITPQDLSMAMQKIYQTFVALAAQLQSIHENVKVLKEQYLGY
RKMFLGDAVDVFEARRTEAKKWQNAPRVTTGPTPFSTMPNAAAVAMAATLTQQQQPATGP
QPSLGVSFGTPFGSGIGTGLQSSGLGSSNLGGFGTSSGFGCSTTGASTFGFGATNKPSGS
LSAGFGSSSTSGFNFSNPGITASAGLTFGVSNPASAGFGTGGQLLQLKKPPAGNKRGKR
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgtccacggggttctccttcgggtccgggacgctgggttccaccaccgttgcggccggt
ggtaccggcacaggcggcggtttctccttcgggactggggcgtctagcaacccttctgtg
gggctcaattttggaactctcggaagcactgccactccagcaactacatctgctccttct
ggtggttttggaactgtactctttggatctaaacctgccactgggttcacgctaggagga
acaaatacaggaatagcaacaactataactacaggattaactctgggaacaccagccact
acatctgcgtctacaactggcttcagtttgggattcaataaacctgcagcatctgccaca
ccatttgctcttcctattacttctacctcagcaggtggtctcactctttcatctgctctg
acatcaactccagcagcatccactggatttactctaaataacctgggaggaactacagcc
acaactacaactgcatcaacgggcctttctttagggggagccttagctggtttgggaggt
tcacttttccaaagtacaaacacagcagcatcaggacttgggcagaatgctttaggcctg
actttgggaactacagcagctacttcaactgcaggcaatgaaggccttggtggtatagat
tttagtagttcatcagataaaaagagtgataaaacaggaacaagaccagaggatagtaag
gcattgaaggatgaaaatctacctcctgtcatctgccaggatgttgaaaatctccagaaa
tttgtgaaggaacagaaacaagtccaagaagaaattagtagaatgtcttcaaaagcaatg
cttaaagtacaagaagatattaaagctctgaagcagcttctctcattggctgccagtgga
ttacagagaaacactcttaatattgacaaattgaaagtagaaactgctcaggagttaaag
aatgctgaaatagctttaagaacccagaaaacaccacctggccttcaacatgaaaataca
gctcctgctgactacttcagaattttggttcagcaatttgaggtacagcttcaacagtac
agacagcagattgaagaactagaaaaccatcttgccacccaagcaaataattcacatata
acccctcaagatttgtcaatggctatgcagaaaatttatcaaacatttgtagctttagct
gcgcaacttcagtctattcatgaaaatgtaaaggtactcaaagaacagtaccttggctac
agaaaaatgttcttaggagatgctgtagatgtatttgaagccaggcgaacagaagctaag
aagtggcagaatgcacccagagttactactggacccacccctttcagcaccatgccaaat
gcagcagccgttgccatggctgcaacacttacacagcagcaacagcctgctacagggcca
cagccatctctgggagttagttttggaacgccattcggctcaggtattggcactggcttg
caatcaagtggcttaggttcttcaaaccttggaggatttggaactagctctggttttgga
tgcagcaccacaggggcctccacatttggatttggagcaacaaataaaccctcaggaagt
cttagtgcaggctttggcagctcaagtacatctgggtttaacttcagcaatcctggcatc
acggcatcagctggtttgacatttggggtgtccaatcctgcctctgcaggttttggaaca
ggaggacaactccttcagttgaagaaacctccagctggaaacaaaagaggaaaaagataa
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