Sciurus carolinensis (gray squirrel): 124984966
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Entry
124984966 CDS
T08117
Name
(RefSeq) protein argonaute-1 isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncar03019
]
124984966
03036 Chromosome and associated proteins [BR:
ncar03036
]
124984966
Messenger RNA biogenesis [BR:
ncar03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
124984966
Chromosome and associated proteins [BR:
ncar03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
124984966
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
124984966
microRNA pathway
RISC loading complex
124984966
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoMid
PAZ
ArgoN
ArgoL1
ArgoL2
Motif
Other DBs
NCBI-GeneID:
124984966
NCBI-ProteinID:
XP_047409142
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Position
1:complement(182919732..182955988)
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AA seq
860 aa
AA seq
DB search
MEAGPSGAAAGAYLPPLQQVFQAPRRPGIGTVGKPIKLLANYFEVDIPKIDVYHYEVDIK
PDKCPRRVNREVVEYMVQHFKPQIFGDRKPVYDGKKNIYTVTALPIGNERVDFEVTIPGE
GKDRIFKVSIKWLAIVSWRMLHEALVSGQIPVPLESVQALDVAMRHLASMRYTPVGRSFF
SPPEGYYHPLGGGREVWFGFHQSVRPAMWKMMLNIDVSATAFYKAQPVIEFMCEVLDIRN
IDEQPKPLTDSQRVRFTKEIKGLKVEVTHCGQMKRKYRVCNVTRRPASHQTFPLQLESGQ
TVECTVAQYFKQKYNLQLKYPHLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQTS
TMIKATARSAPDRQEEISRLMKNASYNLDPYIQEFGIKVKDDMTEVTGRVLPAPILQYGG
RVSRNRAIATPNQGVWDMRGKQFYNGIEIKVWAIACFAPQKQCREEVLKNFTDQLRKISK
DAGMPIQGQPCFCKYAQGADSVEPMFRHLKNTYSGLQLIIVILPGKTPVYAEVKRVGDTL
LGMATQCVQVKNVVKTSPQTLSNLCLKINVKLGGINNILVPHQRSAVFQQPVIFLGADVT
HPPAGDGKKPSITAVVGSMDAHPSRYCATVRVQRPRQEIIEDLSYMVRELLIQFYKSTRF
KPTRIIFYRDGVPEGQLPQILHYELLAIRDACIKLEKDYQPGITYIVVQKRHHTRLFCAD
KNERIGKSGNIPAGTTVDTNITHPFEFDFYLCSHAGIQGTSRPSHYYVLWDDNRFTADEL
QILTYQLCHTYVRCTRSVSIPAPAYYARLVAFRARYHLVDKEHDSGEGSHISGQSNGRDP
QALAKAVQVHQDTLRTMYFA
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atggaagcgggaccctcgggagcagctgcgggcgcctacctgccccccctgcagcaggtg
tttcaggcacctcgccgacctggcattggcactgtggggaaaccaatcaagctcttggcc
aattactttgaggtggacattcctaagatcgacgtctaccactacgaggtggacatcaag
ccggataagtgtccccgcagagtcaatcgggaagtggtggaatacatggtccagcatttc
aagcctcagatctttggtgatcgcaagcctgtgtatgatggaaagaagaacatttacact
gtcacagcactgcccattggcaacgaacgggtcgactttgaggtgacaatccctggggaa
gggaaggatcgaatttttaaggtctccatcaagtggctagccattgtgagctggcgcatg
ctgcatgaggccctggtcagtggccagatccctgttcccctggaatctgtgcaagccttg
gatgtggccatgaggcacctggcatccatgaggtacacccctgtgggccgctccttcttc
tcaccgcctgagggctactaccacccgctggggggtgggcgcgaggtctggttcggcttt
caccagtctgtgcgccctgccatgtggaagatgatgctcaacattgatgtctcagccact
gccttctacaaggcacagccagtgattgagttcatgtgtgaggtgttggacatcaggaac
atagatgagcagcccaagcccctcacggattctcagcgtgttcgctttaccaaggagatc
aagggcctgaaggtggaagtgacccactgtggacagatgaagaggaaataccgtgtgtgt
aatgttacccgccgccctgctagccatcagacgtttcccttgcagttggaaagtggacag
actgtggagtgcacagtggcacaatatttcaagcagaaatacaaccttcagctcaagtat
ccccacctgccttgcctgcaagttggccaggaacaaaagcatacctatttgcccctagag
gtctgcaacattgtggctgggcagcgctgcattaagaagctgactgacaaccagacttca
accatgataaaggctacagctaggtcagccccagacagacaggaggagataagtcgcctg
atgaagaatgccagctacaacctagatccctacattcaggaatttggaatcaaagtgaaa
gatgacatgacggaggtgacggggcgagtgctgccggcgcccatcttgcagtacggcggc
cgggtgagcaggaaccgggccattgccacacctaatcaaggtgtttgggacatgcggggg
aaacagttctacaatgggattgagatcaaagtctgggccatcgcctgcttcgcaccccaa
aaacagtgtcgagaagaggtgctcaagaacttcacagaccagctgcggaagatttccaag
gatgcagggatgcccatccagggtcagccttgtttctgcaaatatgcgcaaggggctgac
agcgtggagcctatgttccggcatctcaagaacacctactcagggctgcagcttattatc
gtcatcttgccagggaagacgcccgtgtatgctgaggtgaaacgagttggagatacactt
ttgggaatggcaactcagtgtgtgcaggtgaagaacgtggtcaagacctcacctcagact
ctgtccaacctctgcctcaagatcaatgtcaaacttggtggcattaacaacatcctagtc
ccacaccagcgctctgctgtctttcaacagccagtgatattcctgggagcagatgttact
caccccccagcaggggatgggaaaaaaccttctatcacagcagtagtaggcagcatggat
gcccaccccagccgatactgtgctacagtgcgggtgcagagaccacggcaggagatcatt
gaagacttgtcctacatggtgcgtgagctgctcatccaattctacaagtccacccgcttc
aagcctacacgcatcatcttctatcgagatggggtccctgaaggccagcttccccagatc
ctccactatgagctactggccattcgcgatgcctgcatcaaactggaaaaggactaccag
cctgggatcacttatattgtggtgcagaaacgtcatcacacccgccttttttgtgctgac
aagaatgagcgaattgggaagagtggtaacatcccagctgggaccactgtggacaccaac
atcacccatccatttgagtttgacttctatctgtgcagccacgcaggcatccagggtacc
agccgaccatcccattactatgtcctttgggatgacaaccgtttcacagcagatgagctt
cagatcttgacataccagctgtgccacacttatgtacgatgcacacgttccgtctctatc
ccagcaccagcctactatgcccgcctagtggctttccgggcacgataccacctggtggac
aaggagcatgacagtggagaggggagccacatatcggggcagagcaatgggcgggacccc
caggccctggccaaagccgtgcaggttcaccaggatactctgcgcaccatgtacttcgct
tga
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