KEGG   Sciurus carolinensis (gray squirrel): 124985042
Entry
124985042         CDS       T08117                                 
Name
(RefSeq) protein bicaudal C homolog 1 isoform X1
  KO
K18756  protein bicaudal C
Organism
ncar  Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ncar03019]
    124985042
Messenger RNA biogenesis [BR:ncar03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     124985042
SSDB
Motif
Pfam: KH_BICC1 KH_BICC1_1st KH_1 KH_GLD-3_1st SAM_1 KH_Vigilin SAM_2 KH-I_KHDC4-BBP KH_NusA_2nd KH_Mug60-KHD4 KH_N4BP1_1st KH_2 KH_PARP14_6 KH_PARP14_8 SAM_Ribosomal_mS41
Other DBs
NCBI-GeneID: 124985042
NCBI-ProteinID: XP_047409341
LinkDB
Position
5:110787983..111058629
AA seq 974 aa
MAAQGEPAYLAAQSDPGSNSERSTDSPMPGSEDDLVAGAPLHSPEWSEERFRVDRKKLEA
MLQAAAEGKGRSGEDFFQKIMEETNTQIAWPSKLKIGAKSKKDPHIKVSGKKEDVKEAKE
MIMSVLDTKSNRVTLKMDVSHTEHSHVIGKGGNNIKKVMEETGCHIHFPDSNRNNQAEKS
NQVSIAGQPAGVESARVRIRELLPLVLMFELPIAGILQPVPDPNSPSIQHISQTYNISVS
FKQRSRMYGATVIVRGSQNNTSAVKEGTAMLLEHLAGSLASAIPVSTQLDIAAQHHLFMM
GRNGSNIKHIMQRTGAQIHFPDPSNPQKKSTVYLQGTIESVCLARQYLMGCLPLVLMFDM
KEEIEVDPQFIAQLMEQLDVFISIKPKPKQPSKSVIVKSVERNALNMYEARKCLLGLESS
GVTVATSPSPASCPAGLACPSLDILASAGLGLTGLGLLGPTTLSLNTSTNPNSLLNALNS
SVSPLQSPSSGTPSPTLWAPPLANTSSATGFSAIPHLMIPSTAQATLTNILLSGVPTYGH
TAPSPPPGLTPVDVHINSMQTEGKKITSSLNGHAQSPNIKYGAISTSSLGEKVLSGNHVD
PSIQTTGSEQASPKSNPAEGCNDAFVEVGMPRSPSHSGNAGDLKQMMGHSKVSCAKRQTV
ELLQGTKNSHLHSTDRLLSDPELSATESPVADKKAPGSERAAERAAAAQQNSERARLAPR
PSYINMQAFDYEQKKLLATKAMLKKPVVTEVRTPTNTWSGLGFSKSMPAETIKELRRANH
VSYKPTMTTTYEGSSVSLSRSNSREHLGSGSESDNWRDRNGIGPTSHSEFAASVSSPKRK
QNKSTEHYLSSSNYMDCISSLTGSNGCNLSSSFKGSDLPELFSKLGLGKYTDVFQQQEID
LQTFLTLTDQDLKELGITTFGARRKMLLAISELNKNRRKLFEPPNARTSFLEGGASGRLP
RQYHSDMASVSGRW
NT seq 2925 nt   +upstreamnt  +downstreamnt
atggccgcccagggcgagcccgcctacctggcggcacagtcggacccgggctccaacagt
gagcgcagcactgattcgcccatgcccgggtccgaggacgacttggtcgccggagcgccc
ctgcacagccccgagtggagcgaagagcgcttccgcgtggacaggaagaaacttgaggcc
atgttacaagctgcagctgaaggaaaaggcagaagtggggaagacttttttcagaagatc
atggaggaaacaaacactcagattgcttggccttccaaactgaagatcggagccaaatcc
aagaaagatccccatattaaggtttctggaaagaaagaagatgttaaagaagccaaggaa
atgatcatgtctgtcttagacacaaaaagcaatcgggtcacattgaagatggatgtttcg
catacagaacactcccatgtgattggcaaaggtggcaacaatattaaaaaagtgatggaa
gaaacaggatgtcacatccactttccagattccaacaggaataatcaagcagagaaaagc
aaccaggtatctatagcaggacaaccagcaggagtagaatctgcccgagttagaattagg
gagctgcttcctttggtgctgatgtttgagttaccaattgctggaattcttcaaccagtt
cctgatcctaattccccctctattcagcacatatcacaaacgtacaacatatcagtatca
tttaaacagcgttcccgaatgtatggtgctactgtcatagtacgagggtctcagaataac
acaagtgctgtgaaggaaggaactgccatgctgttagaacatcttgctgggagcttagca
tcagctattcctgtgagcacgcaattagacattgcagcccaacatcatctctttatgatg
ggtcgaaatgggagcaacatcaaacatatcatgcagcgaacgggtgctcaaattcacttt
cctgatcccagtaatccacagaagaaatccaccgtctacctccagggcaccattgagtct
gtctgtcttgcaaggcaatatctcatgggttgtcttcctcttgtgctgatgtttgatatg
aaggaagaaattgaagtagatccacagttcattgctcagttgatggaacagcttgatgtc
tttatcagcattaaaccaaaaccaaagcagcctagcaagtctgtgattgtgaaaagtgtt
gagcgaaatgccttaaatatgtatgaagcaaggaaatgtctcctcggacttgaaagcagt
ggggttaccgtagcaaccagtccatccccagcatcgtgccctgccggcctggcttgtccc
agcctggatatcttagcttcagcaggcctcggactcactggactaggtcttttggggcca
accaccttatcactaaacacttcaacaaacccaaactcactcctgaatgctcttaatagc
tcagtcagtcctttgcaaagtccaagttctggcacccctagccccacattatgggcaccc
ccacttgctaatacttcaagtgccacaggtttctctgccataccacatcttatgatccca
tctactgcacaagccacgttaaccaatattttattgtctggagtgcccacctatgggcac
acagctccgtcaccccctcctggcttgactcctgttgatgttcatatcaacagtatgcag
acagaaggcaaaaaaatcacctcttctttaaatggacatgcacagtctccaaatataaaa
tatggtgcaatatcaacttcatcacttggagaaaaagtgctgagtgggaatcatgttgat
ccatccatccagacaactggctctgagcaggcttctcccaaatcaaaccctgcagaaggt
tgcaatgatgcttttgttgaagtaggcatgcctcgaagtccttcccattctgggaacgct
ggtgacttaaaacagatgatgggtcactccaaggtttcctgtgccaaaaggcagactgta
gagttattgcaaggcacgaaaaactcacacttacacagcactgacaggttgctctcagac
cctgaactgagtgctacagaaagccctgtagctgacaagaaggctccaggaagtgaacgt
gccgcagagagggcagcagctgcccagcaaaactctgaaagggcccgccttgccccacgt
ccatcatatatcaacatgcaggcatttgactatgaacaaaagaagctattagcaaccaaa
gctatgttaaagaaaccagtggtgacagaggtcagaacacctacaaatacctggagtggc
ctggggttttctaaatccatgccagcagaaactatcaaagagctgagaagagccaaccat
gtgtcctataagcccaccatgacgaccacttatgagggctcatcagtgtctctctcacgg
tccaatagtcgtgagcacttgggaagtggaagtgaatctgacaactggagggaccgaaat
ggaataggacccacaagtcacagtgaatttgcagcttctgttagcagccccaagcgtaaa
caaaacaaatcaacggaacactatctcagcagtagcaattacatggactgcatttcctcg
ctgacaggaagcaatggctgtaacctgagcagttccttcaaaggctctgacctaccagag
cttttcagcaaactgggcctgggcaaatacacagatgtcttccagcaacaagagattgat
cttcaaacattcctcactctcacagaccaggacctgaaggagctgggaattaccactttt
ggtgccaggaggaaaatgctgcttgcaatctcagaactaaataaaaaccgaagaaagctc
tttgaaccaccaaatgcacgcacctctttcctggaaggtggagcgagtggaaggttacct
cgtcagtaccactcagacatggccagtgtcagtggccgctggtag

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