Sciurus carolinensis (gray squirrel): 124985122
Help
Entry
124985122 CDS
T08117
Name
(RefSeq) tudor domain-containing protein 1-like isoform X1
KO
K18405
tudor domain-containing protein 1/4/6/7
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ncar03036
]
124985122
Chromosome and associated proteins [BR:
ncar03036
]
Eukaryotic type
Gene silencing
piRNA pathway
124985122
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
SMN_Tudor
zf-MYND
DUF4537
Motif
Other DBs
NCBI-GeneID:
124985122
NCBI-ProteinID:
XP_047409458
LinkDB
All DBs
Position
5:161078763..161113193
Genome browser
AA seq
1180 aa
AA seq
DB search
MNVKLPPNMMSRNNLEASTCKMTESFSFEKNESKLPPHDSLRSPGAHHNHPNFRLKSPEN
GNKKNNFLLCEQTKQYLASQEDSSVSSNPNGINGEVVGSKGDRKTLPAGNSVSPLSVGNN
SPPKEIKTKPSNSVSPAQSKKSHKLVENSLSISNPALFNSLGPPLRSTTCHRCGLFGSLR
CSQCKQTYYCSTACQRKDWSAHSIVCKPVQQSFHKLEDNKSPFETKNMEVKNESDCPLGV
TKEITTGAEKIMFSDLRSLQLKKTMEIKGTVTEFRHPGDFYVQLYSSEVLEYMNQLSASL
KETYANMVHDEDYIPVKGEVCVAKYTVDQTWNRVIIQDVDVPQKKVHVLYIDYGNEEIIP
VNRIHQLNRNIDLFPPCAIKCFVTGVVPVEENWSNDCIRTIKTLFMEQFCSIKIVDILKE
EVVTYAVDVMLQSSGKLLDHVLVEMGYGLKPKGQNSKKQSTDQSDPEDVGKMTAENKIVV
DRSDLIPKVLTVNVGDEFCGVVAHIQTPEDFFCQQLQSGHKLAELQAALSEHCGQVSPRS
DFYPTIGDICCARFSEDDQWYRASVLAYASEESVLVGYVDYGNFEILSLTRLCPIIPKLL
ELPMQAIKCVLAGVKPSLGIWTPEAICLMKKIVQNKMVTVKVVDKLENSSLVELTDESLT
PSVSVTRVLIDAGFAVEEKESATDQPSGMKKASVPLGVEEVNPLEWTWVELAVDQTVDVV
VCMMYNPGEFYCHVLKEDALKKLNDLNKSLAEYCQQKLPNGFKAEIGQPCCAFFTGDGNW
YRALVKEILPSGNVKVHFVDYGNVEEVTTDELQVLPSKFLQLPFQGVQCWLADIQPRNKH
WTKETIARFQICVAGIKLQARVVEITEKGAGVELTDLSTSYPRIISDVLINEHLVSKAGS
PHKDLPNNRPVNKRNHQIGIQGLQAISSEHWKTIELPVNKTVQASILEIINPNLFYAIPD
EMPENQEKLCILTAELLEYCNAQKSRLSYRPRIGDACCAKYTNDDFWYRAVVLGISDSDV
RVLYADYGNIETLPLSRVQPIATSHLELPFQIIKCSLEGLMELNGSCSQLMIELLKNFML
NQNVMLSVKGVIKNVHTVSVEKCSENGTINVADKLVMYGLAKSITSKKQSALNKEKMHRM
NCCCTQLQKQVEKHEQILLFLLNNPTNQNKFIEMKKLLKS
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgaatgttaagttaccgcctaatatgatgtcaagaaataatttagaagcatcgacttgt
aaaatgaccgaatcatttagttttgaaaaaaatgaaagcaagcttccaccacacgattcc
ttaagaagtcctggagcacatcataaccatcctaatttcaggttgaaaagcccagagaat
ggaaacaaaaagaacaattttttgctttgtgagcaaaccaaacagtatttagcgagtcag
gaagacagttcagtatcttcaaaccctaatggcatcaatggagaagtagttggatccaaa
ggagacaggaagaccttaccagcaggaaactcagtgtcaccattaagcgttggaaataat
tcaccacccaaagaaataaaaactaagcccagcaatagtgtgtctcctgcacagtcaaaa
aaatcacacaagttggttgagaattccttgtccataagtaatccagcactcttcaactcc
ttaggacctcctcttcggtcaacaacttgccatcgctgtggtctgtttgggtcgctgagg
tgctctcagtgcaagcagacatactattgctccacggcctgtcagaggaaagattggtct
gcccacagcatcgtgtgcaagcctgtccagcaaagtttccataaacttgaagataataaa
tcaccttttgaaacaaagaacatggaagtgaaaaatgagagtgactgtccacttggggtg
actaaagaaataaccactggtgctgagaaaattatgttttctgacttgagaagtctgcaa
ctcaagaaaaccatggaaataaagggtacagttactgaattcagacacccaggtgacttt
tatgtccagttatattcttcagaagttttagaatatatgaaccaactctctgcaagttta
aaagaaacatatgcaaatatggtgcatgatgaagattatattccagttaagggggaagtt
tgtgttgccaagtataccgttgatcagacctggaacagagtgataatacaagatgttgat
gtgccacagaagaaggtgcacgtcttgtatattgattacggaaatgaagaaataattcca
gtaaacagaattcaccaactaaacagaaacattgacttgtttcctccttgtgccataaag
tgctttgtgactggtgttgtaccagtagaggagaattggagcaacgattgtatcagaact
attaaaacactgtttatggagcagttctgttctataaagattgtcgacatcttgaaagaa
gaagtggttacctatgctgtagatgttatgctacaaagttcaggaaaactcttagaccat
gtgcttgtagaaatgggatatggtttgaaacccaaaggacaaaattctaagaagcaaagc
acagatcaaagtgatcctgaagatgttggaaaaatgacagctgaaaataaaattgttgta
gacagaagtgacctaatccccaaagtgctaactgtgaatgtaggtgatgagttctgtggt
gtggttgcccacattcaaacaccagaagacttcttttgtcaacaactacaaagtggccat
aagcttgctgaacttcaggcggcactcagtgagcactgtggtcaagtgtctccacgctct
gatttttatccgaccattggtgatatatgttgtgctcggttttcagaggatgaccagtgg
taccgtgcctctgttctggcctatgcttctgaagaatctgtactggtcggctatgtcgat
tatggaaactttgaaatccttagtttaacaagactttgtcccataattccaaagttgttg
gaattgccaatgcaagctataaagtgtgtgctggcaggagtaaagccatcattaggaatt
tggactccagaagctatttgtctcatgaaaaaaattgtgcagaacaaaatggtcactgtg
aaagtggtggacaagttggaaaatagctccctggtggagcttacagatgagtccttgaca
cccagtgtcagcgttaccagagttctcatagacgcaggctttgctgtggaggaaaaggag
agtgcgacagatcaacccagtggcatgaaaaaagccagtgttcccttgggtgtggaagaa
gtaaatccattggagtggacatgggttgagcttgctgttgaccaaacagtagatgttgtg
gtctgcatgatgtataatcctggagaattttattgccatgtccttaaagaggatgcttta
aagaagctcaatgatttgaataaatcattagcagaatattgccagcagaagttgcctaat
ggtttcaaggcagaaataggacaaccttgctgtgctttttttacaggtgatggtaactgg
tatcgtgctttggtcaaggaaatcttgccaagtggaaatgtcaaagtgcactttgtggat
tatggaaatgttgaggaagttactacagatgaactccaagtgttaccatcaaaattttta
caacttccatttcaaggggtacagtgctggttagcagatatacagcctagaaacaaacac
tggactaaagaaaccatagcaagatttcagatatgtgttgcagggataaaactccaagcc
agagtggttgaaatcactgaaaaaggggcgggagttgaactcactgatctttccacttct
tatcccagaataattagtgatgttctgattaatgaacatctggtttcaaaagctggttcc
ccacataaggacttgccaaataatagacctgttaataaacgtaatcatcaaattggcatc
caggggcttcaagccatctcttcagagcactggaagacgatagaattgccagtaaataaa
actgtgcaagcaagcatactagaaatcataaacccaaacctgttttatgccatcccagat
gagatgccagaaaatcaagaaaaactgtgtatattgacagctgaattgttagaatattgc
aatgctcagaaaagtcgtctgtcctacagaccaagaattggagatgcatgctgtgccaaa
tatacaaatgatgatttctggtatcgcgcagttgttctggggatatcggactctgatgtg
agagtgctctatgcagactatgggaacatcgagaccctgcctctttccagagtgcagccc
attgccaccagccacctggagctccctttccaaatcattaagtgttcacttgaaggactg
atggagttgaatgggagctgttctcaattaatgatagagctattaaaaaatttcatgttg
aatcagaatgtaatgctttctgtgaaaggagttatcaagaatgttcatacagtgtcggtg
gagaagtgttctgagaatggtaccatcaatgtggctgataagctggtgatgtacggcctg
gcaaaaagcatcacgtctaaaaagcaaagtgctttaaataaagaaaagatgcataggatg
aattgctgctgtacacagttgcagaaacaagttgaaaaacatgagcaaattcttctcttc
ctcttaaacaatccaactaatcaaaataaatttattgaaatgaaaaaactgctaaaaagt
taa
DBGET
integrated database retrieval system
