Sciurus carolinensis (gray squirrel): 124985137
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Entry
124985137 CDS
T08117
Name
(RefSeq) lysosome-associated membrane glycoprotein 1-like
KO
K06528
lysosomal-associated membrane protein 1/2
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar03272
Virion - Hepatitis viruses
ncar03273
Virion - Lassa virus and SFTS virus
ncar04140
Autophagy - animal
ncar04142
Lysosome
ncar04145
Phagosome
ncar05152
Tuberculosis
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
124985137
03272 Virion - Hepatitis viruses
124985137
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
124985137
04142 Lysosome
124985137
04140 Autophagy - animal
124985137
09160 Human Diseases
09171 Infectious disease: bacterial
05152 Tuberculosis
124985137
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124985137
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ncar04147
]
124985137
04090 CD molecules [BR:
ncar04090
]
124985137
Membrane trafficking [BR:
ncar04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
124985137
Autophagy
Chaperone mediated autophagy (CMA)
Cargo receptors
124985137
Other autophagy associated proteins
RNautophagy/DNautophagy
124985137
Exosome [BR:
ncar04147
]
Exosomal proteins
Exosomal proteins of hepatic cells
124985137
CD molecules [BR:
ncar04090
]
Proteins
124985137
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lamp2-like_luminal
Lamp2_2nd
Glycoprot_B_PH1
DEC-1_N
CTV_P6
Motif
Other DBs
NCBI-GeneID:
124985137
NCBI-ProteinID:
XP_047409511
LinkDB
All DBs
Position
5:complement(792482..809606)
Genome browser
AA seq
420 aa
AA seq
DB search
MAAPGGARRPLLLLLLLGVVHGASAEFVVRDSNGTACIMANFSAAFGTSYETGHGFQNVS
FELPPSAEVLKNNSSCGGVNASSPSLVIAFGGGHSLALTFTRNATRYRVQLMRFIYNMSD
TSTFPNASSKEVKTVSSVTDIKADIDTKYRCVSTTEVHMSNVTVSLRDVTIQAYLSNNNF
SKGESRCQQDQPQPSPATLPPAPPSPSPSPSPSPVPTESPFVSKYNVSGDNGTCLLASMG
LQLNITYTRRDNKTVTSVLNINPNETTASGNCSAFLVTLELQSKRGMVLVLRFGMNASSS
RFFLQGIQLNATFPDAKEPTFGATNTSLRALQATIGHSYRCNTEEHIRVTQAFSLNVFSV
WVQAFKVEGDRFGSVEECLLDGNNMLIPIAVGGALAGLVLIVLIAYLIGRKRSHAGYQTI
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggcggcccccggcggcgcccggcgaccgctgctgctgctgctgctgctgggtgttgtg
catggtgcctcggcagagttcgtggtgagagacagcaacgggacagcttgtataatggcc
aacttctctgctgcctttgggacaagctatgagactgggcatggttttcagaacgtgagc
tttgaattaccaccctctgcagaagtactgaagaacaacagctcttgtgggggagtaaat
gcttccagccctagcctcgtgattgctttcggaggaggacattcgctggcactcactttc
acgagaaatgcaacacgttatcgggtccagctcatgcgttttatttacaacatgtcagac
acatcaactttccccaacgcaagttccaaggaggtcaagactgtttcgtctgtcactgac
atcaaggcagacatagacacgaagtacagatgtgtcagcaccaccgaggtccacatgagc
aacgtgaccgtcagcctccgtgatgtcaccatccaggcctacctgtcaaacaacaacttc
agcaagggagagtcgcgctgccagcaggaccagcctcagccttccccagccacgctgcca
cctgctccacccagcccctcacccagcccctcacccagccccgtgcccaccgagagcccc
tttgtgtccaagtacaatgtgagcggcgacaacgggacctgcctgctggccagcatgggg
ctacagctgaacatcacctacacacggagagacaacaagactgtgactagtgttctcaac
atcaacccaaatgagaccacagccagcgggaactgcagtgccttcctggtgaccctggag
ctgcagagcaagaggggcatggtcctggtcttgcgatttgggatgaatgcaagctctagc
cggtttttcctacaagggatccagctgaatgcaacttttcctgacgccaaagagcccacc
tttggagccaccaacacctcactgagagccctgcaggccaccattgggcactcctacagg
tgtaacactgaggagcacatccgcgtcacccaggccttctccctcaacgttttcagcgtg
tgggtccaggccttcaaggtggaaggtgaccggtttgggtctgtggaagagtgtctgctc
gatgggaacaacatgctgatccccatcgccgtggggggtgccctggcggggcttgtcctc
atcgtcctcatcgcctacctcatcggcaggaagaggagtcatgctggctaccagacaatt
tag
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