Sciurus carolinensis (gray squirrel): 124985174
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Entry
124985174 CDS
T08117
Name
(RefSeq) katanin p60 ATPase-containing subunit A-like 1
KO
K07767
katanin p60 ATPase-containing subunit A1 [EC:
5.6.1.1
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ncar04812
]
124985174
Enzymes [BR:
ncar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
124985174
Cytoskeleton proteins [BR:
ncar04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
124985174
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
KATNA1_MIT
AAA_lid_3
Vps4_C
RuvB_N
TIP49
AAA_5
AAA_33
AAA_14
Mg_chelatase
AAA_16
AAA_22
NPHP3_N
AAA_7
AAA_28
IstB_IS21
TsaE
AAA_18
AAA_2
AAA_17
nSTAND3
AAA_24
RNA_helicase
ORC-CDC6-like
NACHT
Parvo_NS1
PhoH
Zeta_toxin
CCDC22_CC
AAA_25
SRPRB
AAA_30
Motif
Other DBs
NCBI-GeneID:
124985174
NCBI-ProteinID:
XP_047409608
LinkDB
All DBs
Position
5:complement(26707204..26794546)
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AA seq
489 aa
AA seq
DB search
MNLAEICDNAKKGREYALLGNYDSSMVYYQGVIQQIQRHCQSVRDPAIKGKWHQVRQELL
EEYEQVKSIVSTLESFKIEKPPDFPVSCQDEPFRDPAVWPPPVPAEHRAPPQIRRPNREV
RPLRKEMAGVGARGPVGRAHPISKSEKPTSRDKDCRARGRDDKGRKNTQDGTSDGEIPKF
DGAGYDKDLVEALERDIVSRNPSIHWDDIADLEEAKKLLREAVVLPMWMPDFFKGIRRPW
KGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAP
TTIFIDEIDSICSRRGTSDEHEASRRVKSELLIQMDGVGGALENDDPSKMVMVLAATNFP
WDIDEALRRRLEKRIYIPLPTAKGRAELLKINLREVELDPDIQLEDIAEKIEGYSGADIT
NVCRDASLMAMRRRINGLSPEEIRALSKEELQMPVTKGDFELALKKIAKSVSAADLEKYE
KWMVEFGSA
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgaatttggctgagatttgtgacaatgcaaagaaaggaagagaatatgcacttcttgga
aattatgactcatcaatggtgtattaccagggggtgatacagcagattcagagacattgc
cagtcagtcagagacccagccatcaaaggcaaatggcatcaggttcggcaggaattactg
gaagaatatgaacaagttaaaagtattgtcagcactttagaaagttttaaaattgaaaaa
cctccagattttcctgtgtcttgtcaagatgaaccatttagagatcctgctgtttggcct
cctcctgttcctgcagagcatagagctccacctcaaatcaggcgtccaaatcgagaagta
agacctctgaggaaagaaatggcaggagtaggagcccggggacctgtaggccgagcacat
cccatatcaaagagtgagaaacctacaagtagggacaaggattgtagagcaagagggaga
gatgacaagggaaggaaaaatacgcaagatggtacaagcgatggtgaaattccaaaattt
gacggtgctggatatgataaggatctggtagaagcccttgagagagacattgtatccagg
aatcctagcattcattgggatgacatagcagatctggaagaagcaaagaaattgctaaga
gaagctgttgttcttccaatgtggatgcctgactttttcaaaggaattagaaggccatgg
aagggtgtgttgatggttggacccccaggcactggtaagactatgctggcaaaagccgtt
gccactgaatgtggaacaacattcttcaatgtgtcctcttctacactgacatctaaatac
agaggtgaatctgagaagttagtccgtctcttgtttgaaatggctaggttttatgcccct
accacaatcttcattgatgaaatagactctatctgtagccgaagaggaacttctgatgag
catgaggcaagtcgcagagtcaagtctgagctcctcattcagatggatggagttggagga
gctttagaaaatgatgatccttccaaaatggttatggtattggctgctaccaatttccca
tgggacattgatgaagctttgcgaaggagattagaaaaaaggatatatatacctctccca
acagccaaaggaagagctgagcttctgaagatcaatcttcgtgaagttgagttagatcct
gatattcaactggaagatatagcagagaagattgagggctattctggtgctgatataact
aatgtttgcagggatgcttctttaatggccatgaggcgacgtatcaatggcctaagtcca
gaggaaatccgcgcactttccaaggaggagcttcagatgcctgttaccaaaggagacttt
gagttggctcttaagaaaattgctaagtctgtctctgctgcagacttggagaagtatgag
aaatggatggttgaatttggatcagcttga
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