Sciurus carolinensis (gray squirrel): 124985217
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Entry
124985217 CDS
T08117
Name
(RefSeq) LOW QUALITY PROTEIN: peroxisome proliferator-activated receptor gamma coactivator-related protein 1-like
KO
K17963
peroxisome proliferator-activated receptor gamma coactivator-related protein 1
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
ncar03029
]
124985217
Mitochondrial biogenesis [BR:
ncar03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Coactivators
124985217
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
124985217
NCBI-ProteinID:
XP_047409705
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All DBs
Position
5:150679735..150695077
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AA seq
1662 aa
AA seq
DB search
MAARRGRRDGVAPSPTGGPGPDPGGGVRGGGWGSRNQAPYGTVGTMSCGEQVLLHEEGDD
SGFVNLSRLGPSLRDKDLEMEELMLQDETLLGTMQSYMDASLISLIEDFGSLGESRLSLE
EQNEVSLLTALTEILDNADSENLSPFDSIPDSELLVSPREGSSLHKLLSLSRTPPERDLI
TPIDPLGPSTGSSRVSGVEMSLADPSWDFSPPSFLETSSPKLPSWRPPRSRPRWGQSPPP
QQRSDGEEEEEAATFSGQMLAGELDNSVSTIPDFPMHLACPEEEDKTTAAEVAVPAAGDE
SISSLSELVRAMHPYCLPNLTHMASLEDELQEQPDDLTLPEGCVVLEIVGQAATTGDDLE
IPVVVRQIPTGPQSVLLNDSLEDSPALHLLMPTLESETETAIPRIAXCPEKEGLSLDSAC
LLEPKEVLEPLVSKELRNSPANAVLGSQRARKGRRKKSKEQQAACVEGYARRLRSSSRGQ
SLVATEMTSPASNLQKLPQEEXQREGGLSQGRGKPRAWARAWATALEKPSSGNLERSAGQ
GSPTKEGPLDLYSKLVDTVQANPVSPHLSLVDSPQANPMPFDSVEANTTAVDPALTHPVP
VNLASLSSELVDPLPTDPVLTEPALADSAAVDPAVVVPISDNLSSVDAVPADPVPVDSVP
SDLAPVDSVLVKSRPTDPRRGATSSVQGSSASQLLDSESSEPPKAIITPEAKEVVGPLKV
ESGTNATAQEARPRPLSLSEYRRRRQQRQAEAEEKSSQPPAGKWPSLPETPTGLADIPCL
VVPPAPAKKTTPQRSPEAPPETYFVPVGPSPDSPSPEPSANKSMVITPNEQVVPSQEMPL
PARPPPPVQSMSPAGPMPHTVPSPLPFPPGGLAMPPILPPPANGQRVPSLPLPPLPPPGL
PVSVGPVPPDPYTHYAPVPPWPCYPPVSPSGYPCLPPPPTVPLVSGTPGTYAVPPACNVP
WVPHPAPVSPYNSSCTYGPMGWGPGLQHPPFWSAVPPPPLPSASVGGAVLQPKVEPSSIP
AGPPENVLPAPMAPSLSLGPAGHGTPQIETTKVEVKPVPVSPHLKHKVSLPGAEPRIKAP
PCLSPEVVAIEEPASERLKPETQETRPREKSLSPAIKAVPLPRQSIVPKLPAVHPARLRK
LSYLPTPRTQGSEDVVQAFISEIGIEASDLSSLLEQFEKSEAKKECPPPVPADSLAVGNS
GSVDTPQEKRPLDRLQAPELANVAGLTPPATPPHQLWKPLAAVSLLAKAKSPKATAQEGT
LKPEGVTEAKHPAAACLQDGXHGPSPVHVGSGDHDYCVRSRTPPKKMPXLVIPEVGSRWN
VKRHQDITIXPVLSLGPVAPLFPCITTSQEPLDHRTSNEQADPSAPCLAPSALLSPEASP
CRNDMNTRTPPEPATKQRSLRCYRKACRSASPXKRGWQGRRGRSSRSVSSGSNRTSEASS
SSSSSSSRSRSRSRSLSPPHKRWRRSSCSSSGRSRRCSSSSSSSSSSSSSSSSSSSSRSR
SRSPSPRRRSDRRRRYGSYRSHDHYQRQRVLQKERAIEERRVVFIGKIPGRMTRSELKQR
FSXFGEIEECTIHFRVQGDNYGFVTYRYAEEAFAAIESGHKLRQADEQPFDLCFGGRRQF
CKRSYSDLDSNREDFDPAPVKSKFDSLDFDTLLKQAQKNLRR
NT seq
4989 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcgccggggacggagagacggagtcgcgccgtccccgactgggggccctggt
cctgaccccggcggtggagtccgcggcggcggttgggggagtcggaaccaagcgccgtat
gggaccgtgggcaccatgagctgtggggagcaggtgctgctacacgaagagggggatgat
tctggctttgtcaatctgtctcggctgggcccatcactgagggacaaagatctggaaatg
gaggagttgatgttacaggatgagacactactggggaccatgcagagctacatggatgcc
tcccttatttccctcattgaggattttgggagcctcggagagagcaggttatctctggag
gaacagaatgaagtgtcgctgctcacagctctgacggagatcttggacaatgcagattct
gagaacctgtctccatttgacagcattcctgactcggagctgcttgtctcacctcgggag
ggctcttctctgcacaagctgctcagtctctctcggacacccccagaacgtgaccttatc
accccaattgacccactggggcccagcacaggcagtagtagagtaagtggggttgagatg
tctcttgcagatccctcctgggacttctccccaccttctttcttggagacctcttctcct
aagctgcccagctggagacccccaagatcaagaccacgctggggccagtcccctcctccc
cagcagcgcagtgatggagaagaagaggaagaggcagccacttttagtggccagatgctt
gctggggagcttgacaactctgtgagcaccatcccagacttccccatgcacctggcttgc
cctgaggaagaagataagacaacagcagcagaggtggcagtgccagcagctggtgatgag
agcatctcttccttgagtgagctagtacgggccatgcacccctattgcttgcccaacctc
acccacatggcatcacttgaggatgagcttcaggaacagccagatgatttgacactgcct
gagggttgtgtggtgctggagattgtgggtcaggcagccacaactggtgatgacctggag
attccagttgtagtacggcagattcctactggaccccagtctgtgctcctgaatgactca
ctagaggatagtcctgccttgcacctgctcatgcccacacttgaatcagaaacagagact
gctatacccaggatagccncctgccctgagaaagaggggttgtcattggactcagcatgc
ttattggaaccgaaggaagtcttggagccactggtgtccaaggagctaaggaactcacct
gccaatgcagtgcttggttcccagagagctcgaaagggcaggagaaagaagagcaaggag
cagcaagcagcctgtgtggaaggttatgccaggaggctgaggtcatcctctcgtggtcaa
tctcttgtggctacagaaatgacctctccagcaagcaacttgcagaagctgcctcaggag
gaanctcagagagagggtgggctttcccagggtagggggaagccacgggcttgggctcgg
gcctgggcaactgccttggagaagcctagctctgggaacttagagagaagtgctggacaa
ggtagtcctactaaagaagggcctctggatctgtactccaagctggttgacactgtccaa
gccaaccctgtttcaccccatctctcattggttgactctcctcaagccaaccccatgcca
tttgactctgttgaagctaatactactgcagttgaccctgctctgacccaccctgttcct
gttaacctggcttcattgagctcagagctggttgaccctctcccaactgacccagtgttg
actgaaccagccctggctgactcggcagcagttgaccctgcagtagttgtacccatctca
gataatttgtcatcagttgatgctgtcccagctgaccctgtgccagttgactctgttccc
agtgacctggctccagttgattctgtgctggttaagtccagaccaacagaccccaggcga
ggtgcaacatcatcagtccagggaagttcagcttcccaactcctggattcagagtcctca
gagcccccaaaggccatcatcacccctgaagccaaggaggttgtaggtcctttgaaggtg
gaaagtggtactaatgccacggcccaggaagccagaccacggccactcagcctttcggaa
taccgacgacgaaggcagcaacggcaagcagaggcagaagagaagagttcccagcctcca
gctgggaagtggcccagccttccagagacccccacggggctggcagacatcccttgtctt
gtcgtcccaccagccccagccaagaagacaactccgcagagaagtcctgaagctcctcct
gagacttactttgtgcctgtgggtcccagccctgattctcctagtcctgagccatctgca
aacaagtctatggtcataacacccaacgaacaggtggtgccatcccaagagatgccactg
ccggcaagacctccccctcctgtgcagtccatgtctcctgctgggcccatgcctcacaca
gtgcccagtcctttgcctttccccccaggtgggctggccatgccccccatactgcctcct
cctgcaaatggacaaagggtccccagtcttcccctacctcctttgccacctcctggtctt
ccagtgtctgtgggaccagtgccacctgatccctatactcactatgcccctgtgccaccc
tggccttgctatccccctgtgtccccttctgggtatccttgcttgcctcccccaccaacg
gtgcccctagtgtctggtactcctggcacctatgctgtgcctcctgcttgcaatgtgcct
tgggtacctcatcctgctcctgtctcaccttacaactccagttgtacttatgggcccatg
ggatggggcccagggctacaacaccctccattctggtctgctgtacccccacctcctttg
ccttcagcctctgttgggggagctgttctccaacctaaggtggagcccagtagcattcca
gctggtcctcctgaaaatgtacttcctgcgcctatggctccttcccttagtcttgggcca
gctggccatggaactccacaaatagagaccaccaaggtggaggtcaagccagtgcctgta
tctccccatctgaaacacaaggtttccctccctggtgcagagcccaggatcaaggctcca
ccatgtctgtctcctgaggttgtggctattgaggagcctgcatcagagaggctaaaacct
gagacccaggagaccaggcctagggagaagtccctatctcctgctattaaggctgttccc
ttaccaaggcagagcattgtccccaagctgcctgctgtccacccagcccgtctaaggaag
ctatcctacctgcccaccccccgtacccaggggtccgaggatgtggtacaggctttcatc
agtgagattggaattgaggcatcagacttgtccagtctgttggagcagtttgaaaaatca
gaagccaaaaaggagtgtcctcctccagttcctgctgacagcttggctgtaggaaactca
ggcagcgttgacactccccaggagaagagacccctagaccggttacaagccccagaactg
gccaacgtggcagggctcacccctcctgctacccctccccatcagttatggaagcccttg
gctgctgtctcactactggccaaagccaaatctcctaaggccaccgcccaggagggaacc
ctgaagcctgaaggagttacagaggccaaacatccagctgcagcctgcctccaagatggg
ngtcatggccctagtccagtccatgtgggctctggggaccatgactattgtgtccggagt
aggacaccccccaaaaagatgcctngcctagtcattccagaggtgggctcccgatggaat
gtcaaacgacatcaggacatcaccatcnaacctgtcttgtccctgggcccagttgctccc
ctatttccatgcataaccacctcccaggagccacttgatcacaggactagcaatgagcag
gcagatccctcagcaccttgccttgccccatctgctttgctgtctcctgaggcctcaccc
tgccggaatgacatgaacactaggactccccctgagcccgcaaccaagcagcggtcattg
cgctgttaccgaaaagcctgcaggtcagccagtcccnccaaacggggttggcagggccgt
cgcggccgcagcagccgttctgtcagctctgggtccaaccggaccagtgaagcatcttcc
tcatcgtcgtcttcctcatcccggtcccggtccaggtccaggtccctctcccccccacac
aagaggtggcgaaggtccagctgcagttcctctggacgttccagaagatgctcttcctct
tcttcatcatcatcttcttcgtcgtcttcctcatcctcatcatctagttcccgaagccgt
tctcgctccccatccccccgccggagaagtgacaggaggcggcggtacggctcttaccgt
tcacatgaccattaccaaaggcagagagtgctgcagaaggagcgtgcaatagaagagaga
agggtagtcttcattgggaagatacctggccgcatgactcggtctgagctgaaacagagg
ttttctngttttggagagattgaggagtgcaccatccacttccgagtccaaggtgataac
tacggcttcgtcacttatcgatatgctgaggaggcatttgcagccattgagagtggccat
aagctgcggcaagcagacgagcagccctttgatctttgttttgggggccgcaggcagttc
tgcaagaggagctattctgatctggattccaatcgggaagactttgaccctgctcctgta
aagagtaaatttgactctcttgattttgacacattgttgaaacaggcccagaagaacctc
cggaggtaa
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integrated database retrieval system
