KEGG   Sciurus carolinensis (gray squirrel): 124985223
Entry
124985223         CDS       T08117                                 
Name
(RefSeq) DNA excision repair protein ERCC-5-like isoform X1
  KO
K10846  DNA excision repair protein ERCC-5
Organism
ncar  Sciurus carolinensis (gray squirrel)
Pathway
ncar03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    124985223
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ncar03400]
    124985223
DNA repair and recombination proteins [BR:ncar03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     124985223
SSDB
Motif
Pfam: XPG_N XPG_I 5_3_exonuc
Other DBs
NCBI-GeneID: 124985223
NCBI-ProteinID: XP_047409723
LinkDB
Position
5:complement(8843036..8867950)
AA seq 1177 aa
MGVQGLWKLLECSGRQVSPEALEGKVLAVDISIWLNQALKGVRDRHGNSIENAHLLTLFH
RLCKLLFFRIRPIFVFDGDAPLLKKQTLAKRRQRKDLASSDSRKTTEKLLKTFLKRQAIK
TAFSRKRNEALPSLTQVQRDDDIYVLPPLQEEEKHSSEEEDEKEWQERMDQKQALQEEFF
HNPHAIDIESEDFSSLPPEIKHEILTDMKEFTKRRRTLFEAMPEESNDFSQYQLKGLLKK
NYLNQHIENVQKEMNQQHSGQIQKQYEEEGGFLKEVESRRVVSEDTSHYILIKGVQAKKV
EEVDSECLPSSSKMHNMSFDMKSSPVENPKPEKEPDATPPSPRTLLALQAAMLGSSSEEE
LESGALRQHDQRSAAADQGSVSPRTLLAIQRALDDDDDVRVSAGDSMQTGGPGVRTLLRD
SPSREHGEGPRAREVGGGLFSTGPPPASVNFEEEHGASAGRGEELADSAHLLSTVVNQGS
ESGVPEEHMSLTHTENRVSQMNTESTDKAKRGPLPHSDMPRLPSGQELTQAPPTSAAFEP
KSETHPEELELWAGASPSQSGYGSSALSSDEEREGGANPAEVTGIGTLQERRDTVSVPSE
AIGNLENIVPSSAAEHGNFPKTNQECETTKPAGQELVSVLNSLEPVEMESEESESDGSFI
EVQSVMSDEELEASKPPSEQSEEESRGTEEGEAPGGTQRLLQENPEGKDSDTDPHKEAEQ
EAEDSPNEWQDINLEELEALESNLLAQQNSLKAQKQQQERIAATVTGQMFLESQELLRLF
GIPYIEAPMEAEAQCAILDLTDQTSGTITDDSDIWLFGARHVYKNFFNKNKFVEYYQYVD
FHNQLGLDRNKLINLAYLLGSDYTEGIPTVGCVTAMEILNEFPGHGLEPLLKFSEWWHEA
QKNKKIRPNPYDTKVKKKLRKLQLSPGFPNPAVADAYLRPVVDDSKGSFLWGKPDLDKIR
EFCQRYFGWNRTKTDESLFPVLKQLSVQQTQLRIDSFFRLAQQEKQDAKRIKSQRLNRAV
TCMLRKEREEAASEVEAASVAMERESEMLEEAEGKAQKRSLAEKSEAASSLKRGRLSGPR
GGDECGGFLGEACLSESGASSGEDAEGSPLRNTQRRRAAEERRIGARAGGQEAGVSTSSS
SEDDGGRSSKATLVTARPVFGKRKGRLRRARGRARNT
NT seq 3534 nt   +upstreamnt  +downstreamnt
atgggtgtccaggggctctggaaactgctggagtgctcggggcggcaggtcagccccgag
gcactggaggggaaggtcctcgccgtggatatcagcatttggctaaaccaagcccttaaa
ggcgtccgggatcgccacgggaactcgatagaaaatgcccatcttctcactttgtttcat
cgactttgcaaactcttattttttcgaattcgccctatttttgtatttgatggtgatgct
ccattgttgaagaagcagactttggcaaaaagaaggcagaggaaggatttggcctccagt
gactccagaaaaactacagagaagcttttgaaaacatttttgaaaagacaggctatcaaa
actgccttcagccggaaaaggaatgaagcactacccagtctcacacaagttcaaagagac
gatgacatctatgttttgccacctttacaagaggaagaaaaacatagttcagaagaagaa
gatgaaaaagaatggcaagaaagaatggatcagaaacaagcattacaggaagagttcttc
cataatcctcatgcaatagatattgagtctgaggacttcagcagcctacccccggaaata
aagcatgaaatcttgactgatatgaaagaatttaccaagcgaagaagaacattgtttgaa
gcaatgccagaggaatccaatgacttttcacagtaccaactcaaaggcttgcttaaaaaa
aactatctaaaccagcacatagaaaatgtccaaaaggaaatgaatcagcagcactcagga
caaatccagaagcagtatgaagaggaagggggttttctgaaggaggtggaatcgaggaga
gtggtctctgaggacacttcacactacatcttgataaaaggtgttcaagctaagaaagtt
gaagaagtggattcggagtgtcttccttcttccagcaaaatgcacaacatgtcttttgac
atgaagtcatcacctgttgaaaacccaaagccagagaaagaacccgatgccacccctcct
tccccaagaacattgctcgctctgcaagccgccatgctaggcagtagctcggaggaggag
ctggagagtggggctctgaggcagcatgaccagaggagtgcagcagcagaccaaggctcc
gtatccccacggaccctcttggctattcagagagcgcttgatgatgacgacgacgtgaga
gtgagtgcgggggacagcatgcagacaggagggccaggagtgaggacgctgcttagagac
agccccagcagagagcacggtgaagggcctagagcgagagaagtgggaggagggctgttc
tccacgggccctcctccagccagcgtgaacttcgaggaggagcatggggccagcgctggc
cgtggagaggagctggcagactcagctcatttgttgagcactgtagttaatcaaggcagt
gagtctggtgttccagaagaacacatgtcactcactcacacggagaacagagtctctcag
atgaacactgagtccacggacaaggctaagaggggtcctcttccacacagtgacatgccc
aggctcccctcgggacaggaactgacacaggcacctcccacaagtgcagcttttgaaccc
aagagcgaaacacatcctgaggagctcgagctgtgggcaggtgctagcccatcccagagt
ggatatggttcctctgctttgtcgagcgacgaagaaagagaaggtggagcaaatcctgcc
gaggtcactggcattggcactttgcaagaaaggagggacacagtaagtgtcccttcagag
gcaataggtaacctagaaaatattgtaccctcaagtgctgcagagcatgggaatttcccc
aaaaccaaccaggaatgcgagacaactaaacccgcgggccaggagctagtttcagttctg
aattccttggaaccagtggaaatggagtctgaagaaagtgaatctgatggaagcttcata
gaagtgcagagtgtgatgagtgatgaggaacttgaagcttccaaacctccctctgaacaa
agtgaagaggaatcaagaggaactgaggagggagaagcccctggtggcacccagcgtctt
cttcaggaaaacccagaaggcaaggactctgacactgacccacacaaagaagctgaacag
gaagcagaggactcccccaatgaatggcaagatattaatttggaggagctggaagccctg
gagagcaacctcttagcgcaacagaattctctgaaagctcagaagcagcagcaggagcgg
atcgctgccactgtaacgggacagatgttcctggagagccaggagcttctgcgcctgttt
ggcattccctacatcgaagctcccatggaggcagaggcgcagtgtgctattctagacctc
actgaccagacttctggaaccatcaccgatgatagtgacatctggctgtttggagcacgg
cacgtctataagaactttttcaataaaaacaaatttgtagaatattaccagtatgtggac
tttcacaaccaattaggattggaccggaacaaattaataaatttggcctatttgcttgga
agtgattacactgaaggaataccaactgtaggctgtgtaacagccatggaaattctcaat
gaattccctggacatggcctggaacctctcctaaagttctcagagtggtggcatgaagca
caaaaaaataagaagataagacccaatccctatgacaccaaagtgaagaaaaaactacgg
aagctgcaactctcacctggtttccctaacccggcggttgcggatgcttacctcaggcct
gtggtggatgactccaagggctcgtttctgtgggggaaacccgatctggacaagattaga
gaattttgccagcggtattttggctggaacaggacgaagacggacgaatctctgtttcca
gtattaaagcaactgagtgtccagcagacacagctccgaatcgattcattctttagactg
gctcagcaggagaagcaagatgctaaacgcattaagagccagagactaaacagagctgtg
acgtgtatgctgaggaaggaaagggaagaagcagccagcgaggtggaagccgcttctgtt
gctatggagagagagagtgagatgcttgaggaggcagagggcaaagcccagaagagaagc
ctcgctgagaaatcagaggcggcctcgagcctgaagagggggaggctgtcggggcccaga
ggtggggacgaatgcggtgggtttttgggggaggcctgcctctcggagtctggtgcctct
tcaggtgaggatgccgaaggttcacctctgaggaacacgcaaaggagaagagctgctgag
gagcggagaatcggcgcccgcgcaggagggcaggaggcgggcgtgagcacgagcagctcc
agcgaggacgacgggggcaggagctcgaaggccaccctggtgacagccaggcccgtgttt
gggaagaggaaagggaggctgagacgtgccaggggacgggccaggaacacctga

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