KEGG   Sciurus carolinensis (gray squirrel): 124985241
Entry
124985241         CDS       T08117                                 
Name
(RefSeq) protein transport protein Sec31B-like isoform X1
  KO
K14005  protein transport protein SEC31
Organism
ncar  Sciurus carolinensis (gray squirrel)
Pathway
ncar04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    124985241
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ncar04131]
    124985241
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ncar02044]
    124985241
Membrane trafficking [BR:ncar04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    124985241
Secretion system [BR:ncar02044]
 Sec (secretion) system
  Eukaryotic Sec-SRP protein
   124985241
SSDB
Motif
Pfam: WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 WD40_Prp19 Beta-prop_RIG_2nd WD40_WDHD1_1st Beta-prop_EML_2 WD40 Beta-prop_TEP1_2nd WDR55 Beta-prop_EIPR1 TPR_Sec16 WD40_RFWD3 ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_WDR35_TULP_N Type_III_YscX
Other DBs
NCBI-GeneID: 124985241
NCBI-ProteinID: XP_047409771
LinkDB
Position
5:complement(149245043..149277810)
AA seq 1178 aa
MKLKELERPAVQVWSPASQYPVYLATGTSAQQLDASFSTNGTLEIFEVDFRDPSLDLKQK
GVLSVSSRFHKLIWGSFDNGLLESSGVIAGGGDNGMLTLYNVTHILSSGKEPVIAQRQKH
TGAVRALDFNPFQGNLLASGASNSEIFIWDLNNLSIPMTPGSKSQQPLEDIKALSWNRQV
QHILSSAHPSGKAVVWDLRKNEPIIKVSDHSSRMHCSGLAWHPDIATQLVLCSEDDRLPV
IQLWDLRFASSPLKVLESHSRGIFSMSWSHADAELLLSSAKDNQTLCWNLGSSEVVYKLP
TQSSWCFDVQWCPRNPPVFSAASFDGWISLYSIMGRSWEVQHMGQADKISSSFSKGQPLP
PLQVPEHVAQASLIPPLKKPPKWIRRPAGVSFAFGGKLVTFGLSSTPAQQLPQPCPRLVF
ISQVTTESEFLRRSLELQEALGSGNLLKYCQNKSQQVLLPCEKMLWQFLKVTLEQDSRMK
FLKLLGYNKEELLEKVTTWLKRDLGTAESPQPKRDDPNSNRQVFCSQASKYTTEEASASS
AFFDELVPQNMTPWEIPITEDTDGLLGQALLLGELGCAVELCLKEERFADAIILAQAGGT
DLLKRTQERYLAKRQTKISSLLSCVVQKNWKDLVCACSLKNWREALALLLTYSGPEKFPE
LCDMLGTRMEQEGGRALTAEATLCYVCSGSVERLVECWAKDHQASSPMALQDLIEKVMVL
NRSLEPRQAPDRVSPGPTTIYRITQYASLLAAQGSLANAMSFLPSDCAQPPVQQLRDRLF
HAQGSTVLGQQSPPFPFPRVVVGATTHSKETSSYRFGSQPSHQVPTPSLRPMSTSQPSLV
MPLTPSHPSPCQSSRMQTISDYRAPEPQAVQPLSLGPGVRPALSQQQLLGGQRAPPLNPV
RFPGTWPVSGLPPPMAAPDIMQPGSTSLSETPRLLPLPPVRPPGPSLLSSQLLAPSANFP
MTYPPGGPGAPCSSSLPSANILTPRPEPQESWKNVPAPQANLQRKKMLETFMPLVPITAP
VMSLIPEPQRVLPPQTPISSVNHAPPGAPGELSLQQRQQLPPKMVERKELPPEHQSLKTS
FEALLQRCSLSATDLKTKRKLDEATQRLEGLYEKLCEGTLSPHVLAGLHEVARCVDAGSF
EQGLAVHAQVVGCSSFSEVSSFMPVLKAVLTIAHKLQG
NT seq 3537 nt   +upstreamnt  +downstreamnt
atgaagctgaaggaacttgaacggccagctgtccaagtgtggagcccagccagtcagtac
cctgtgtatctggccacaggaacatctgcccaacagctagatgcctcctttagcacaaat
ggcacattggaaatctttgaggttgatttcagggatccttctctggacttgaaacaaaaa
ggagtcctttctgtctcgagcaggtttcacaagctgatctggggaagctttgacaatggg
cttctggaaagctccggggttattgcaggcggtggagacaatggcatgcttactctatac
aatgtgacccacatcctgtcttctggaaaggagcctgtgattgcccagagacagaagcac
acaggagctgtcagagccctcgactttaatcctttccagggcaacctgctggcctcaggg
gccagtaattctgaaatcttcatttgggatttgaataacctgagcattccaatgacccca
ggatccaagtcacagcagcccctagaagacatcaaggcactgtcttggaaccggcaagtc
cagcacattctgtcttctgctcaccccagtggtaaggcagttgtgtgggatctcaggaag
aatgaacctatcatcaaagtcagtgatcacagcagcaggatgcactgctcgggccttgcc
tggcacccagacatagccacccagttagtgctatgctcagaagatgaccgtctcccagtg
attcagttgtgggacttacgctttgcctcctcacccctgaaggtgctagagagccacagc
aggggaatcttttcaatgtcatggagccacgctgatgctgagctgctgctcagtagtgcc
aaggacaaccagaccttgtgctggaacctggggagcagtgaggtggtgtataagctaccc
acacagagcagctggtgctttgatgttcagtggtgccctcggaaccctccagtgttctct
gctgcctcttttgatggctggatcagtttgtactctatcatgggtaggagctgggaagtt
caacacatgggacaggctgacaagatctcctcttccttcagcaaaggccagcctcttcca
ccattgcaggtaccagagcatgtggctcaagcatcattgatacctcccttgaaaaagccc
cccaaatggattagaaggccagcaggtgtttcatttgcttttggggggaagctggttacc
tttggcctttccagtacccctgcccagcagttgccacagccttgcccccgccttgtcttt
atcagtcaagtcaccacagaatctgaattcctgaggaggtcacttgagctgcaggaggcc
ttaggatcaggaaatctactgaaatactgtcagaacaagagccagcaggttttgctgcct
tgtgaaaagatgctctggcagttcctgaaggtgactttagagcaagactcaagaatgaaa
ttcctaaagctattaggatacaataaagaagagcttctggagaaggtgaccacatggtta
aagagggacttgggcacagcagagagccctcagcccaagagagatgaccccaacagtaac
agacaagtcttctgcagccaggcctccaaatataccacagaggaagcctctgcatcctca
gccttctttgatgagctggttcctcagaacatgaccccatgggagatccctatcacagaa
gacactgatggactcctgggccaggccctgctgctcggggaactgggctgtgctgtggag
ctgtgtctgaaggaagagcgcttcgctgatgctatcatcttggctcaggctgggggcact
gatcttctgaaacggacacaggagcgctatttggccaagaggcaaaccaaaatctcctcg
cttctatcctgtgtcgtgcagaagaactggaaagacctggtgtgtgcctgtagcctgaag
aactggagagaggcactggccttactattgacatactcagggccagagaagttccctgag
ctctgtgacatgctgggaactcgcatggaacaggagggtggcagggcattaactgctgaa
gctacactctgttatgtgtgctcagggagtgtggagcggctggtagagtgctgggcaaaa
gaccaccaggcctcatcccccatggctctgcaggacctgatagagaaggtgatggtcctt
aacaggagcttggagcctcggcaggctcctgatagggtgagcccaggtcctaccacaatc
tacaggatcacccagtatgccagcctcctggcagctcagggcagccttgccaatgccatg
agcttcttacccagtgactgtgctcagccaccagttcagcagctaagagatcgtcttttt
cacgcccaaggttccactgtcctgggtcaacagtcccccccttttccctttccccgggtt
gttgtgggagctaccacacactctaaagagacatcatcttacagatttggatcccagcct
tctcaccaggttccaactccatctctaaggcctatgagcacctctcagccatccctagtg
atgcccttgacaccctcccatcctagcccttgtcagagctccaggatgcagactataagt
gactacagggcacccgaaccccaggcagtccagcctttgtctttgggccctggggtcagg
cctgctttatctcagcagcagctcttaggaggacaaagggctccacccttaaaccctgtg
agattccctggaacgtggcctgtttctggtctccctccacccatggcagccccagatatc
atgcagcctggttcaacttctctatctgagactcctagactactccctctgcctcctgtg
agaccaccaggtcccagccttctgagctcccagctcctagccccttctgccaactttcct
atgacttaccctcctggagggcctggtgctccatgctctagctctctcccaagtgctaac
atcttgacccctcgtccagaacctcaagagtcctggaaaaatgttccagccccccaggca
aacctccagaggaaaaagatgctggagacatttatgcctctggtaccaattactgctcca
gttatgagccttatccctgagccacaacgggtccttccaccacagacccctatttccagt
gtgaatcatgctccccctggagctccaggagaactcagcctgcagcaacgtcagcaactg
cctcctaagatggtggaaaggaaggaactgcccccagagcatcagtccttgaagactagc
tttgaggcacttctccagcgctgctccctgtctgcaactgacttgaagacaaaaagaaag
ctggatgaggccacccaacgtctagaaggtctatatgagaaactctgtgaggggacactc
tcacctcatgtactggcggggctacacgaagttgcccgatgtgtggatgcaggaagcttt
gagcagggcctcgcagtgcacgcccaggtggtgggctgcagcagcttcagcgaggtgtcc
agcttcatgcctgtcctgaaggctgtcctcaccattgcacacaagctgcagggctaa

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