Sciurus carolinensis (gray squirrel): 124985276
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Entry
124985276 CDS
T08117
Name
(RefSeq) short/branched chain specific acyl-CoA dehydrogenase, mitochondrial-like isoform X1
KO
K09478
short-chain 2-methylacyl-CoA dehydrogenase [EC:
1.3.8.5
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar00071
Fatty acid degradation
ncar00280
Valine, leucine and isoleucine degradation
ncar01100
Metabolic pathways
ncar01212
Fatty acid metabolism
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
124985276
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
124985276
Enzymes [BR:
ncar01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.8 With a flavin as acceptor
1.3.8.5 short-chain 2-methylacyl-CoA dehydrogenase
124985276
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GFIT
Motif
Pfam:
Acyl-CoA_dh_1
Acyl-CoA_dh_N
Acyl-CoA_dh_M
Acyl-CoA_dh_2
ACOX_C_alpha1
Acyl-CoA_ox_N
Motif
Other DBs
NCBI-GeneID:
124985276
NCBI-ProteinID:
XP_047409841
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Position
5:168352518..168388074
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AA seq
431 aa
AA seq
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MQGPAVRLLRSSHLLRRNYPALSSWKILPHVLKSSQPEALLDVRNNARPFAPLQTFTDEE
LMIKSAVKKFAQKEIAPLVSTMDENSKMEESVIQGLFQQGLMGIEVDAKYGGTGLSFFSC
ILVIEELAKVDASVALLCDIQNTVVNKLIKKQGTEEQKATYLPKLVTEKVGSFCLSETGA
GSDPFSLKTRADKKGNYYVINGSKMWISNAAYAGLFLVFANVDSTRGYRGITCFLVDRDT
EGLGVGRAENKLGIRASATCPLTFENVKVPETNILGQIGHGYKYAIGSLNEGRIGIAAQM
LGLAQGCFDYTIPYIKERIQFGQRIFDFQGLQHQVAHVATQLEATRLLIYNAARLVEAGR
PFIKEASMAKYYAAEIAGLTTSKCIEWMGGVGYTKDYPVEKYFRDAKIGTIYEGTSNIQL
NTIAKYIDREY
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgcagggcccagctgttcggctgctgcgcagcagccatctgctaagaagaaactaccca
gctttgtcttcttggaaaattcttccccatgtcctaaagtcttcccagccagaagctcta
cttgatgtaagaaataatgctcgaccctttgcgccactgcaaacatttacagatgaggaa
ttgatgataaagagtgcagttaaaaaatttgcacagaaagaaattgctcctttggtttca
accatggatgaaaattccaaaatggaggaatcagtaatacaaggattgttccaacaaggg
ttgatgggtattgaagttgatgcaaagtatggaggaacaggactctcatttttttcctgt
atcctagtcatagaggaattagccaaagttgatgcatctgtggctctcctgtgtgacatc
cagaacacagtagttaacaagctgattaaaaaacaaggaaccgaagaacaaaaggccacc
tatcttcctaaactggttacagaaaaagtaggaagcttctgcctttcagagactggagca
ggaagtgaccccttttctttgaagaccagagctgataaaaagggaaattactatgtcatc
aatgggtcgaagatgtggattagcaacgctgcatatgcaggactcttcctggttttcgca
aatgtggactctaccagaggatatagaggcatcacctgcttcttagtagatcgtgataca
gaaggccttggtgtagggagagcagaaaacaaactggggatccgagcttctgccacctgt
ccattaacgtttgaaaatgtcaaggttccagaaaccaatatcttgggacagattggccat
ggctataagtatgccataggaagtcttaatgaaggcagaataggaattgctgcacagatg
ctgggactggcccaaggatgctttgactacaccattccatatattaaagaaaggatacaa
tttggccaaagaatatttgattttcaggggctccaacaccaagtggctcacgtggccacc
cagctggaagctacaagattattaatatacaacgctgctaggcttgtagaagctggaagg
ccattcataaaagaagcatctatggccaaatactatgcagcagagattgcagggctcaca
actagtaaatgtattgaatggatgggaggagtaggctatacaaaagattaccctgtggaa
aaatacttccgggatgcaaagattggtacaatatatgaaggaacttccaatatccagctg
aacaccattgccaagtacatcgaccgggaatactga
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