Sciurus carolinensis (gray squirrel): 124985341
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Entry
124985341 CDS
T08117
Name
(RefSeq) E3 ubiquitin-protein ligase RNF6
KO
K22753
E3 ubiquitin-protein ligase RNF6 [EC:
2.3.2.27
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncar04121
]
124985341
Enzymes [BR:
ncar01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124985341
Ubiquitin system [BR:
ncar04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
124985341
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4
zf-ANAPC11
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
DUF7610
Motif
Other DBs
NCBI-GeneID:
124985341
NCBI-ProteinID:
XP_047409941
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All DBs
Position
5:81027910..81037828
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AA seq
683 aa
AA seq
DB search
MNQSRSRSGDGGEETSSQGHNHRENERRWQQERLHREEAYYQFINELNDEDYRLMRDHNL
LGTPGEITSEELQQRLDGVKEQLASQPDLRNGTNNRDSEVPRESSNEDSLLEWLNTFRRT
GNATRSGQNGNQTWRAVSRTNPNSGEFRFSLEIHINHENRGFEINGEDYSGIPLSDFSRD
RTSNRQERSTSPVARRTRSQTSMDFSGSSSNITRTRLGSRGQNLVEGSLSTLGRLRNRIG
RAVGIPRTSASRANFSNHTNQSGGSELRQREGQRFGAAHVWENGARTNVTVRNTNQRLEP
IRLRSAFSSRSRSPIQRQSGTVYHNSQRESRPLQQTIRRSVRRRGITRVFVEQDRERRGT
ASAPFSNSRLVSRITVEEGEESSRSSTAVRRHPTITLDLQVRRIRPGENRDRDSIANRTR
SRVGLAENTVTVESNSGGFRRTISRLERSGIRTYVSTITVPLRRISENELVEPSSVALRS
ILRQIMTGFGELSSLMEAESESEIQRNGQHLPEMHSELSNLGTVNESSQHSEGFSQDRQA
QEDSTEMQAENETTQPQTQNSDSRGGRQLRNSNNLVETGTLPILRLAHFFLLNEGDDDDR
IRGLTKEQIDNLSTRNYEHNGIDSELGKICSVCISDYVTGNKLRQLPCMHEFHIHCIDRW
LSENCTCPICRQPVLGSGIANNG
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagtctagatctagatcaggtgatggtggtgaagaaacttcatctcaagggcat
aatcatcgtgaaaatgagagaagatggcagcaagagcgtctccacagagaagaagcctat
taccagtttattaatgaactcaacgatgaagactatcgactaatgagagatcataatctt
ttaggcacccctggagaaataacatcagaagaactgcaacaacgattagatggagtgaag
gaacaactagcatcacagcctgacttgagaaatgggacaaataacagagactcagaagtc
cctagagaaagttcaaatgaagattctctgctagaatggttgaacacctttcgtcgcaca
ggaaatgcaactcgaagtggacaaaatggaaaccaaacttggagagctgtgagtcgaaca
aatccgaacagtggagagtttcggtttagtctggaaatccacataaatcatgagaataga
ggatttgaaattaatggagaagattattcaggcattccactttcagattttagcagggat
cgtactagcaataggcaagaaagatcaactagtcctgtggctaggcgaacaagaagccaa
acttccatggatttcagtggtagtagttccaacattacaaggacaaggcttggttcaagg
gggcagaatttagtcgaaggatcactttcaacactgggaaggttaaggaatagaattggg
cgggcagttggcattcctagaactagtgcttcacgtgctaattttagtaatcacacaaac
caatcaggtggtagtgaactcaggcaaagggaggggcagagatttggagcagcacatgtt
tgggaaaatggggctagaactaacgttacagtgagaaatacaaaccaaagattagagcca
ataagattacggtctgctttcagtagtcgaagccgttcaccaattcagagacagagtggc
actgtttatcataattcccaaagggaaagtagacctttacagcaaaccattagaaggtct
gtgaggaggagaggtataactcgggtctttgtagaacaagatagagaacgcagaggtact
gcaagtgccccattctctaattcaagacttgtgtcaagaataacagtagaagaaggagaa
gaatccagcagatcctcaactgctgtacgacgacatccaacaatcacactggatcttcaa
gtgagaaggattcgtcctggagaaaatagagatcgggatagtattgcaaatagaacccgc
tctagagtagggctagcagaaaatacagtcactgttgaaagcaatagtgggggctttcgc
cgaactatttctcgattagaacggtcaggcattcgaacctatgttagtaccataacagtt
cctcttcggagaatttctgagaatgagcttgttgagccatcctcagtggctcttcggtct
attttaaggcagatcatgactgggtttggagaactgagttctttaatggaggctgagtct
gagtcagaaattcagagaaatggtcagcatttaccagagatgcactcagaactgagtaac
ttaggtacagttaatgaaagcagccagcacagtgaaggtttctctcaagacaggcaagcc
caagaagacagcactgaaatgcaagctgaaaatgagacaacccagcctcagactcaaaac
agtgacagtagaggtggcaggcagttgcgaaattcaaacaacttagttgaaaccggaaca
ctacctattcttcgccttgctcatttctttttactgaacgaaggtgatgatgatgatcga
attcgtggtttaaccaaagagcagatagataatctttccacacggaactatgagcataat
ggtattgatagtgaactaggtaaaatctgtagtgtttgtatcagtgactatgtaactgga
aacaagctcaggcaattaccttgcatgcatgaatttcacattcattgtattgaccgatgg
ctctcagagaattgcacttgtccaatatgtcggcagcctgttttaggatccggcatagca
aataatgggtga
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