Sciurus carolinensis (gray squirrel): 124985353
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Entry
124985353 CDS
T08117
Name
(RefSeq) chondroitin sulfate N-acetylgalactosaminyltransferase 2 isoform X1
KO
K00746
chondroitin sulfate N-acetylgalactosaminyltransferase 1/2 [EC:
2.4.1.174
2.4.1.175
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
ncar01100
Metabolic pathways
Module
ncar_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
124985353
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ncar01003
]
124985353
Enzymes [BR:
ncar01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.174 glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase
124985353
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
124985353
Glycosyltransferases [BR:
ncar01003
]
Glycan extension
O-Glycan
124985353
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CHGN
Glyco_transf_7C
Glyco_tranf_2_2
KfrA_N
Mei4
SlyX
Csm1_N
Motif
Other DBs
NCBI-GeneID:
124985353
NCBI-ProteinID:
XP_047409960
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Position
5:90694393..90748233
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AA seq
557 aa
AA seq
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MKKQLILLGKYTLIRMSRRGSILHTRTHWLLLGLALLCSLVLFMYLLECAPQTDGNASLP
GVVGENYGKEYYQALLQEQEEHYQTRATSLKRQIAQLKQELQEMSEKMKSLQERKNIGAN
GIGYQGNKEQPSSDLLEFLHSQIDKAEVSTGAKLPSEYGVIPFESFTLMKVFQLEMGLTR
HPEEKPVRKDKRDELVEVIEAGLEVINNPDEDDEQEDEEGPLGEKLIFNENDFIEGYYRT
ERDKGTQYELFFKKADLMEYRHVTLFRPFGPLMKVKNEMIDITRSIINIIVPLAERTEAF
AQFMQNFRDVCIHQDKRIHLTVVYFGKEGLSKVKSILESVTSESNFHNYTLVSLNEEFNR
GRGLNVGARAWDKGEVLMFFCDVDIFFSAEFLNSCRLNAEPGKKVFYPVVFSLYNPAIVY
ANQDAPPPVEQQLVHKKDSGFWRDFGFGMTCQYRSDFLTIGGFDMEVKGWGGEDVHLYRK
YLHGDLIVIRTPVPGLFHLWHEKHCADELTPEQYRMCIQSKAMNEASHSHLGMMVFREEI
EMHLHKQAYRTNSEAVG
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagcagcttatcttgttaggcaaatacacattaataagaatgtctagaagagga
tcaatccttcatacccggacccactggctattgttgggacttgctttgctctgtagcttg
gtattatttatgtaccttctggaatgtgcccctcaaactgatggaaacgcatctcttcct
ggtgttgtcggagaaaattatggtaaagagtattatcaagccctcctacaggaacaagaa
gaacattatcaaaccagggcaacgagtctgaaacgccaaattgcccaactaaaacaagaa
ttacaagaaatgagcgagaagatgaaatcattacaagagagaaagaatataggggctaat
ggcataggctatcaaggcaacaaagagcaaccatctagtgatcttttagaatttcttcat
tcccagattgacaaagctgaagttagcacaggagccaaactacccagtgagtatggggtt
attccttttgaaagttttactttaatgaaagtgtttcagttggaaatgggtctcactcgt
catcctgaagaaaagcctgttagaaaagacaaacgagatgaattggtagaagttattgaa
gctggcttggaggtcattaataatcctgatgaagatgatgaacaggaagatgaggagggt
ccccttggagagaaacttatatttaatgaaaatgacttcatagaaggttattatcgcact
gagagagataagggaacacagtatgaactcttttttaagaaagcagaccttatggaatat
agacatgtgacccttttccgcccttttggacctctcatgaaagtgaagaatgagatgatt
gatattactagatcaattattaatatcattgtgccacttgctgaaagaactgaagcattt
gcacagtttatgcagaacttcagggatgtttgtattcatcaggacaagagaattcatctc
acagtggtgtattttggtaaagaaggtctatctaaagtcaagtctatcctagaatctgtc
acaagtgagtctaattttcacaattacaccttggtttcattgaatgaagaatttaatcgt
ggacgaggactcaatgtgggtgcccgagcttgggacaagggagaggtcttgatgtttttc
tgtgatgttgacatatttttctcagccgaattccttaacagctgccgattaaatgctgag
ccaggtaaaaaagtgttttaccctgtggtgttcagtctttacaatcctgccatcgtttat
gccaaccaggatgcaccgccacctgtggagcagcagctggttcacaaaaaggattctggt
ttttggcgagattttggctttggaatgacttgtcaatatcgatcagattttctaaccatt
ggtggatttgacatggaagtaaaaggttggggtggagaagatgttcatctttatcgaaaa
tacttacatggtgaccttattgtgattcgaactccagttcctggtcttttccacctctgg
catgaaaaacactgtgcagatgagctaacccctgagcagtaccgcatgtgtatccagtcc
aaagccatgaacgaggcttctcactcccacctgggaatgatggtcttcagggaagaaata
gagatgcatcttcataaacaggcatacaggacaaacagcgaggctgttggttaa
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