Sciurus carolinensis (gray squirrel): 124985381
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Entry
124985381 CDS
T08117
Name
(RefSeq) LOW QUALITY PROTEIN: Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1-like
KO
K18443
golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124985381
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124985381
Membrane trafficking [BR:
ncar04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
124985381
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
TPR_28
Sec7-like_HUS
DUF758
Motif
Other DBs
NCBI-GeneID:
124985381
NCBI-ProteinID:
XP_047410017
LinkDB
All DBs
Position
5:150785841..150904576
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AA seq
1724 aa
AA seq
DB search
MVDKNIYIIQGEINIVVGAIKRNARWSTHTPLDEERDPLLHSFSHLKEVLNNITELSEIE
PXVFLRPFLEVIRSEIPTGPITGLALTSVNKFLSYALIDPTHEGTAEGMENMADAVTHAR
FVGTDPASDEVVLMKILQVLRTLLLTPVGAHLTNESVCEIMQSCFRICFEMRLSELLRKS
AEHTLVDMVQLLFTRLPQFKEEPKSYVGDQYEEVKMRHSDSSKWKKQKRSPRPPRHMTKV
TPGTELPAPTGTTLSSNLAGGMPFIEVPTPISSASSETASAVVSPSTDSGLEFSSQTTXQ
EDLTDLEQPGLTGYSTAAEPGSNELGVPEQPAPRMLCLERLNLYAASLRVCFLLFESMRE
HLKFHWRXMYIKKLMEIITVENPKMPYEMKEMALEATVQLWRIPSFVTELYINYDCDYYC
SNLFEDLTKLLSKNAFPVSGQLYTTHLLSLDALLTVIDSTEAHCQAKVLNNLTQQEKKET
ARPSQEAVDGTKEASNIERATVDGKAINMTPDVPGLQQLLTEHGKQGCSDLEDTGDSGTD
KKFTQKPPRFSCLLPDPRELIEIKNKKKLLITGTEQFNQKPKKGIQFLQEKGLLTIPIDN
TEVAQWLRENPRLDKKMIGEFVSDRKNIDLLESFVSTFSFQGLRLDEALRLYLEAFRLPG
EAPVIHRLLEAFTEHWRNCNGSPFANSDACFALAYSVIMLNTDQHNHNVRKQNAPMTLEE
FRKNLKGVNGGKDFEQDILEDMYHAIKNEEIVMPEEQTGLVRENYVWNVLLHRGATPEGI
FLHVPPGSYDLDLFTMTWGPTIAALSYVFDKSLEETIIQKAISGFRKCAMISAHYGLSDV
FDNLIISLCKFTALSNESIENLPSVFGSNPKAHIAAKTVFHLAHRHGDILREGWKNIMEA
MLQLFRAQLLPKAMVEVEDFVDPNGKISLQREETPSNRGESTVLSFVSWLTLSGPEQSSM
RGPSTENQEAKRVALDCIKQCDPEKMITESKFLQLESLQELMKALVSVTPDEETYDEEDS
AFCLEMLLRIVLENRDRVGCVWQTVRDHLYHLCVQAQDFCFLVERAVVGLLRLAIRLLRR
EEISGQVLLSLRILLLMKPSVLSRVSHQVAYGLHELLKTNAANIHSSDDWATLFTLLECI
GSGVKPPAALQATARTDAPDAGAQSDSELPSYHQNDVSLDRGYTSDSEVYTDHGRPGKIH
RSATDADVVNSGWLVVGKDDIDNSKPGSGPSRPGPSPLVNQYSLTVGLDLGPHDTKSLLK
CVESLSFIVRDAAHITPDNFELCVKTLRIFVEASLNGGCKSQEKRGKSHKYDSKGNRFKK
KSKEGSVLRRPRTSSQHATRGGHSDDEEDEGVPASYHTVSLQLLDLMHTLHTRAASIYSS
WAEEQRHLETGGRKIEADSRTLWAHCWCPLLQGIACLCCDARRQVRMQALTYLQRALLVH
DLQKLDALEWESCFNKVLFPLLTKLLENISPADVGGMEETRMRASTLLSKVFLQHLSPLL
SLSTFAALWLTILDFMDKYMHAGSSDLLSEAIPESLKNMLLVMDTAEIFHSADTRGGSPS
ALWEITWERIDCFLPHLRDELFKQTVIQDPMPTEPHGPKSLASAHLTSAAGDPRTPGHPP
PPEIPSELGACDLEKPEGPRATSSSSPGSPVSSSPSRLSPTPDGPPSLAQPPLILQPLAS
PLQVGVPPMTLPIILNPALIEATSPVPLLATPRPTDPIPTSEVN
NT seq
5175 nt
NT seq
+upstream
nt +downstream
nt
atggtggataagaatatttacatcattcaaggggaaattaacattgtggttggggccatc
aaacgaaatgcccgatggagcacccatacaccactggatgaagaacgggatcctctgctg
catagttttagtcacctaaaggaagttttaaacaatataacagaactctcagaaattgag
cccnaagtattccttcgtccatttctggaagtgattcgttcagagatacccactggccct
atcactggactggctcttacttctgtcaacaagttcctgtcctatgcacttatagatcct
acacatgagggaacagcagagggcatggaaaacatggcagatgctgtcacccatgcccgt
tttgtgggcacagatcctgccagtgatgaagttgtcctgatgaaaatccttcaggttcta
cggactctcttgctaaccccagtgggtgcccacctaaccaatgaatctgtgtgtgagatt
atgcagtcttgcttccggatctgctttgaaatgagactcagcgagttattgagaaaatcc
gcagagcacactctcgtagacatggtgcagctgctcttcacaaggttacctcagtttaaa
gaagaacccaagagctatgtgggggaccaatatgaagaagtaaagatgaggcatagtgat
tcatccaaatggaagaaacagaagagatccccccggcctccacgtcatatgaccaaagtc
actccaggtacagagctgcctgcccccactggaaccaccttatcctcaaacttggcaggt
ggcatgcccttcattgaggtgcccacacccatctcctctgcaagttcagaaactgcctca
gcagtggtcagtccctctacagacagtggcctggaattctcctcccagactactnnccaa
gaggacctcactgacctggagcaacctgggctcacagggtacagcacagctgcagagcct
gggagcaatgagctaggggttcctgaacagcctgctcccaggatgctttgcttagaacgg
ctgaacttgtacgcagcttccctacgagtatgcttcctactatttgagagcatgcgggag
catcttaagttccattggaggtaaatgtacatcaaaaagctcatggagatcatcactgtg
gaaaaccccaagatgccttatgagatgaaggagatggcactggaggccactgtgcagctc
tggcgcatccccagttttgtcactgagctctatatcaactatgattgtgattactactgt
tccaatctctttgaggacctcactaagctgctgtccaagaatgcctttcctgtatctggt
cagctctacacaacacacctgctgtctcttgatgccctattgacagtgattgacagcact
gaggcccactgccaggccaaagtcctcaacaacctgacccagcaggagaagaaagaaaca
gccagacccagccaagaggcagtagatggcaccaaagaagctagcaatatcgagagagca
accgtcgatgggaaagcaataaacatgactccagatgtcccaggcctacaacagctattg
acagaacatgggaagcaaggatgcagtgatttggaagacactggtgactctgggactgac
aaaaagtttacccagaagccacctcgattttcctgtctcctgccagatccacgggaacta
attgaaattaaaaacaaaaagaagctgctaatcactggcacagagcagttcaaccaaaaa
ccaaagaaaggcattcagtttcttcaggagaaaggcctcctcaccatcccaatagataac
acagaggtagcccagtggctccgagagaaccctcgactggacaagaaaatgattggagaa
tttgtgagtgaccgcaaaaacattgacctgctggagagttttgtgagcacctttagcttt
cagggtctgcgacttgatgaagctctccgcctctatctggaagccttccgtttgcctggg
gaggcaccagtcatccataggttgctggaagcattcacagagcattggaggaattgtaat
ggctccccatttgccaatagcgatgcctgctttgccctggcctattctgtcatcatgctt
aacacagaccagcataaccacaatgttcgcaaacagaatgcacccatgaccctggaggag
tttcgcaaaaacctaaaaggtgtgaatggaggcaaggactttgagcaagacatcctggag
gacatgtaccatgccatcaagaatgaggaaattgtgatgcctgaggagcagacaggttta
gttcgagagaactatgtgtggaatgtgctgcttcatcgaggtgccacccctgagggcata
ttcctacatgtgcctcctggcagctacgaccttgacctcttcaccatgacctggggccct
actattgctgctctctcttatgtctttgacaaaagccttgaagagacaattattcagaaa
gccatctcaggcttcaggaaatgtgccatgatctccgcccactatggcctcagtgatgtg
tttgacaatcttatcatctccctctgcaaattcacagctctcagcaatgagtctattgag
aacctgcccagtgtatttggaagcaaccctaaagctcatattgcagccaagacagtattc
catttggcccatcgtcatggtgatatcctgcgggagggatggaagaatatcatggaggcc
atgctgcagctcttccgagcccaactgctacccaaggctatggtagaggtagaagatttt
gtggatcccaatggcaagatctctttacagcgggaggagacaccatcaaaccgaggagag
tcaacagtactgagctttgtgagctggctgacattgagtggtcctgagcagtccagcatg
cggggcccatccactgagaaccaagaagccaagagagttgccttggactgtatcaagcaa
tgtgacccagaaaagatgatcacagaaagcaagttcctccagctggagtcactgcaggag
ctcatgaaggctctggtgtcagtaacaccagatgaagagacatatgatgaagaagattct
gctttctgtctagagatgctactaaggatcgtattagagaacagggaccgtgtaggctgt
gtttggcagactgttagagaccatctataccacctctgtgtccaggcacaagatttctgc
ttccttgtggaacgggcagtggttgggttgctgcgcctggctattcggctgttacggaga
gaagagatcagtggccaggtgctgctctccctgcgcatcttgttactgatgaagcccagt
gtgctgtccagagtcagtcaccaggttgcatatgggctccatgaacttcttaagaccaac
gcagccaacatccactccagtgatgactgggccaccctctttacactgctggaatgcatc
ggctcaggagtgaagcctccagcagctctgcaggccacagccaggactgatgcacctgat
gcgggggcccagtcagacagcgagctcccatcctaccatcaaaatgatgtgagcctggac
cgagggtacacttctgactcagaggtctacacagatcatggcagacctggcaagatacac
cgatcagccacagatgctgatgtagtcaacagcggttggttggtggtgggaaaggatgac
attgataactccaagccaggatcagggcccagtcgaccaggcccttcacccctggtcaat
cagtatagcctaacagtgggtctggacctggggccacatgacactaagtctctgcttaag
tgtgtggaatcactatccttcattgtgcgtgacgctgcccacatcacccctgacaacttt
gaactgtgcgtcaagactctccgcatctttgtggaagccagtctgaatggcgggtgcaag
tcccaggagaaacgtggcaagagtcacaaatatgacagcaaagggaaccgcttcaagaag
aaatctaaggagggttcagtgcttcggcggcctcgaacctccagccaacatgccactcgg
ggcgggcacagtgatgatgaggaggatgaaggcgtgcctgccagttaccatactgtgtct
ttacagttgctagacctgatgcacactctgcacacacgggcagcctctatctacagctca
tgggcagaagagcagcgccacctggagacaggtggccggaagattgaagctgattcaagg
actctctgggcccactgctggtgccctttactgcagggcattgcctgcctgtgctgtgat
gcccggcgccaggtgcggatgcaggcactgacgtatctacagcgagcactactggtacat
gacctgcaaaagctagatgccctggaatgggaatcctgttttaacaaggtactatttcct
ctgctaaccaagctcctggagaacatcagcccagcagatgtgggcgggatggaggagacc
cgaatgagggcttccacgctgctttcaaaggtctttctgcagcacctatctccattgctg
tcactctccacctttgcggccctctggctcaccattctagacttcatggacaagtacatg
cacgcaggctccagtgatttactgtcagaggccatccctgaatctctaaagaacatgctt
ctggtgatggacacagcggagattttccacagtgcagatacacgaggaggcagcccctct
gccctctgggagatcacctgggagcgcatcgactgctttctgccacacctacgtgatgag
ctcttcaagcagactgtcattcaagaccccatgcccacagaacctcatggtcccaaatct
ctggcctcagcccacctgacttctgctgctggtgacccgaggacacctggacatccacct
cccccagaaataccctcagagctgggggcatgtgacttggagaagccagagggcccccga
gccaccagcagcagctcccctggatcaccggtgtcctctagtcccagcaggcttagccct
accccagatgggcctccctctctggctcagcccccactgatcctgcagcccttggcctcc
ccactgcaggtgggcgtgccacccatgactctgcccattatcctcaaccctgcacttata
gaggccacctctccggttcctctcctggctacaccacgccccacagaccctatacccacc
tccgaggtcaattaa
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integrated database retrieval system
