Sciurus carolinensis (gray squirrel): 124985463
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Entry
124985463 CDS
T08117
Name
(RefSeq) probable tRNA pseudouridine synthase 1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ncar03016
]
124985463
Enzymes [BR:
ncar01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
124985463
Transfer RNA biogenesis [BR:
ncar03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
124985463
Prokaryotic type
124985463
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GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
Motif
Other DBs
NCBI-GeneID:
124985463
NCBI-ProteinID:
XP_047410138
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All DBs
Position
5:161692016..161724268
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AA seq
351 aa
AA seq
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MAAAEAAVVSSSSLETAPAPGTAERAETAATTAATTAATAAAVAVAAAARTGCEARVVKA
ALATKLLSLSGVFAVHKPKGPTSAELLNRLKEKLLAEAGMPSPEWTKRKKQTLKIGHGGT
LDSAARGVLVVGIGRGTKMLTSMLSGSKRYIAIGELGKATDTLDSTGKVTEEKPYDKITQ
EDIEGILQKFTGTIMQVPPLYSALKKDGQRLSTLMKRGEVVEAKPARPVTVYSISLQKFQ
PPFFTLDVECGGGFYIRSLVSDIGKELSSCANVLELTRTKQGPFTLEEHALPEDKWTIED
VAQSLEHCSSLLPAELTLKKSKPEESDEQVLSCEYMTLNETKVEDDVSKTF
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atggcagctgcagaggcagcagtggtgtcgtcttcgtctttggaaacagctccagcccct
ggaactgcagaaagagcagaaacagccgcaacaacggcggcgaccacggcagcaacggct
gcagccgtggcggttgcagccgcagcccggaccggatgcgaagccagggtcgtcaaggcc
gctttggctactaagctgctgtcccttagcggcgtgttcgccgtgcacaagcccaaaggg
cccacttcagccgagctgctgaatcggttgaaggagaagctcctggcagaagctggaatg
ccttctccagagtggaccaagaggaaaaagcagactttgaaaattgggcatggagggacc
ctagacagcgcagctcgaggcgtgttggtggttggaattggaaggggaacaaaaatgttg
accagtatgttgtcaggatccaagaggtacattgccattggcgagctggggaaagccacg
gacacactcgattctacagggaaagtgacagaagagaaaccctacgataaaataacacaa
gaagatatcgaaggcattctacagaaatttactgggacaataatgcaagtaccacccctc
tattctgcattaaagaaagatggacagagactttcaacattaatgaagagaggtgaagta
gtagaagcaaaacctgccaggccagtaacggtatacagtatctcccttcaaaaattccag
ccaccatttttcacgttagatgttgaatgtggaggaggtttttatatcagaagcttggtc
agtgacattggcaaagagctctcttcttgtgccaatgtactagagctgacccgaaccaaa
caggggccgtttacactagaagaacacgccctccctgaggacaaatggacaattgaggac
gttgcacagtctcttgagcattgctcgtctcttctaccagcagagctgacacttaaaaaa
tcaaaacccgaggaatctgatgagcaggttttgagctgtgaatatatgactctaaatgag
acaaaggtagaagatgatgttagtaagacattctga
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