Sciurus carolinensis (gray squirrel): 124985854
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Entry
124985854 CDS
T08117
Name
(RefSeq) LOW QUALITY PROTEIN: AT-rich interactive domain-containing protein 5B-like
KO
K25857
AT-rich interactive domain-containing protein 5
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncar03000
]
124985854
Transcription factors [BR:
ncar03000
]
Eukaryotic type
Helix-turn-helix
ARID
124985854
BRITE hierarchy
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GFIT
Motif
Pfam:
ARID
Motif
Other DBs
NCBI-GeneID:
124985854
NCBI-ProteinID:
XP_047410434
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All DBs
Position
5:114252510..114431186
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AA seq
1194 aa
AA seq
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MEPNSLQWVGSPCGLHGPYIFYKAFQFHLEGKPRILSLGDFFFVRCTPKDPICIAELQLL
WEERTSRQLLSSSKLYFLPEDTPQGRNSDHGEDEVIAVSEKVIVKLEDLVKWVHSDFSKW
RCGLRAGPVKAEALGRNGQREALLKYRQSTLNSGLNFKDVLKEKADLGEDEEETNVIVLS
YPQYCRYRSMLKRIQDKPSSILTDQFALALGGIAVVSRNPQILYCRDTFDHPTLIENESI
CDEFAPNLKGRPRKKKPCPQRRDSFSGAKDSNNNSDGKAVAKVKCEARSALTKPKNNHTN
CKKVSNEEKPKLAIGEECRADEQAFLVALYKYMKERKTPIERIPYLGFKQINLWTMFQAA
QKLGGYETITARRQWKHIYDELGGNPGSTSAATCTRRHYERLILPYERFIKGEEDKPLPP
IKPRKQENSSQENENKTKVSGTKRIKHEIPKSKKEKENAPKPQDAAEVSSEQEKEQETSN
QKSITEPLPATDLKKKVEGYQDFTARSLASRTDPEKDNETEQGSNSEKEAEEAGEKGPAP
LLPSTPVAPERDPVPIPGSGKQSLTSPSVLVDSKQESKPCCFTESPDNDLQEASFASFPA
TQPPLANQNEIEDDKLPAMADYIANCTVKVDQLGSDDIHNALKQTPKVLVVQSFDMFKDK
DLTGPMNENHGLNYTPLLYSRGNPGIMSPLAKKKLLSQVSGASLSSSYPYGSPPPLISKK
KLIARDDLCSGLSQAHHSQSADHMAVSRPSVIQHVQSFKSKTSEDRKSINDIFKHDKLSR
SDAHRCSFSKHHLNSLADSYVLKQEIQEGKDKLLEKRALPHPHMPSFLADFYSSPHLHSL
YRHTEHHLHSEQTSKYPSRDMYRESENNSFPSHKHQEKLHVNYLTSLHLQDKKLASEKLA
TAEAPTDDQPTDLSLPKNPHKPTGKVLGLAHSATGPQENKGISQFQVISSQSRDCHPKAC
RVSPMTMSAPKKYPESLSRSGKPHHVRLENFRKMEGMVHPILHRKMSPQNIGAARPIKRS
LEDLDLVIAGKKARAVSPXDPSKEVSGKEKASEQESEGGKAAYGGGHSGGGSEGHKLPLS
SPIFPGLYSGGLCNSGLNSRLPAGYSHSLQYLKNQTVLSPLMQPLAFHSLVMQRGXFTSP
TNSQQLYRHLAAATPVGSSYGDLLHNSIYPLAAINPQAAFPSSQLSSVHPSTKL
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
atggagcccaactcactccagtgggtcggctcaccgtgtggtttgcacggaccttacatt
ttctacaaggcttttcaattccaccttgaaggcaaaccaagaattttgtcccttggcgac
tttttctttgtaagatgtacgccaaaggatccgatttgcatagcggagctccagctgttg
tgggaagaaaggaccagccggcaacttttatccagctctaaactttatttcctccccgaa
gacacaccccagggcagaaatagcgaccatggcgaggatgaagtcattgctgtttccgaa
aaggtgattgtgaagcttgaagacctggtcaagtgggtccattctgatttctccaagtgg
agatgtggcctacgagctgggccagtgaaagcagaggcgttgggaagaaatggtcagcgg
gaagctctgctgaagtataggcagtcaaccctgaacagcggactcaatttcaaagatgtt
ctcaaggaaaaggccgaccttggggaggacgaagaagaaacgaacgtgattgttctcagc
taccctcagtactgccgctaccgctccatgctgaaacgcatccaggataagccatcttcc
attctaactgaccagttcgcactagccctgggtggcattgcagtggtcagcagaaaccct
cagatcctgtactgccgggacacctttgaccaccccactctcatagaaaatgagagtata
tgtgatgaatttgcgccaaatcttaaaggcagaccacgcaaaaagaaaccatgcccacaa
agaagagattcattcagtggagctaaggattccaacaataattccgatggtaaagctgtt
gccaaggtgaaatgtgaggccaggtcagccttgaccaagccgaagaataaccatacaaat
tgtaaaaaagtctccaatgaagaaaaaccaaagctggccattggtgaagagtgcagggca
gatgaacaggcctttttggtggcactttataagtacatgaaagaaaggaaaacgccgata
gaacgaataccctatttaggttttaaacagattaacctttggactatgtttcaagctgct
caaaaactgggaggatatgaaacaataacagcccgccgtcagtggaaacatatttatgat
gaattaggcggtaatcctgggagcaccagcgccgccacttgcacccgcagacattatgaa
agattaatcctaccgtatgaaaggtttattaagggagaggaagataagcccttgcctcca
atcaaacctcgaaaacaggagaacagttcacaggaaaatgaaaataaaacaaaagtatca
ggaaccaagcgcatcaaacatgaaatacctaagagcaagaaagaaaaagagaatgcccca
aagccccaggatgcagcagaggtttcatcagagcaagagaaagaacaagagacttcaaac
cagaaaagcatcacagagcctctcccggcaactgacttgaagaaaaaagtggaagggtac
caggattttacagcgagatccctggcatccagaacagacccagaaaaagacaatgaaaca
gagcaaggttccaacagtgagaaagaggccgaggaggcaggagagaaaggacctgcacct
ctgctcccgagcacacctgtggctccagaaagggatccagttccaatccctggatctggc
aaacagtccctcacctctcctagtgtcctggtagactcaaagcaagaatccaaaccctgc
tgttttacagagagccctgacaatgacctccaagaagcatcctttgccagcttccccgct
actcagccaccactggcaaaccagaatgagatagaggatgacaaactgcccgccatggcg
gattacatcgccaactgcactgtgaaggtggaccagttgggcagcgacgacatccacaat
gcactaaagcagaccccaaaggtccttgtggtccagtcatttgacatgttcaaggacaaa
gacctgactgggcccatgaatgagaaccatggactcaattacacacccctgctttactcc
aggggtaacccaggcatcatgtccccactagccaagaaaaagctcttgtcgcaggtgagt
ggggccagcctttccagcagctacccctatggctccccaccccctttgatcagcaaaaag
aaattgatagccagggatgatttgtgttcaggtttgtcccaggcccaccacagtcaaagc
gccgaccacatggcggtcagccggccatcagtgattcagcacgtccagagtttcaaaagc
aagacctcggaggacagaaagagcatcaatgacatttttaagcatgacaagctcagtcga
tcagacgcccaccgctgcagcttctccaagcatcacctgaactccttggctgactcctat
gtcctgaagcaagaaattcaggagggtaaggataaactcttagagaagagggcactcccc
catccccacatgcccagcttcctggcagatttctactcatccccgcatctccacagtctc
tatcgacacaccgaacaccatcttcatagtgaacagacatccaagtacccttctagggac
atgtacagggaatcggaaaacaattcttttccttcccacaaacaccaagaaaagctccat
gtaaattatctcacgtctctgcatctgcaagacaaaaagttggcctcggaaaagttggcc
accgcagaagcccctacagatgatcagccgacggatctgagccttcccaaaaacccacat
aaaccaaccggcaaggtcctgggcctggcccactcagccacaggaccccaggagaacaaa
ggcatctcccagttccaggtcatcagcagccagagtcgagactgccaccccaaggcctgt
cgagtatcacccatgaccatgtcagcacctaaaaagtaccccgagtcactttcgagatcg
ggtaaacctcaccacgtgagactggagaatttcagaaagatggaaggcatggtccatccc
atcctgcaccgaaaaatgagccctcagaacattggtgcagcacgtcccataaagcgcagc
ctggaggatttggaccttgtgattgctgggaaaaaggcccgggcagtgtctcccntggac
ccgtccaaggaggtttctgggaaagaaaaggcctctgagcaggagagtgaaggcggcaag
gcagcctacggtggtgggcattctgggggcggatctgagggccacaagcttcccctctcc
tcccccatcttcccaggtttgtattctgggggcctgtgtaactcgggcctcaactccagg
ctcccagctgggtattctcattctctgcagtacttgaaaaaccaaactgtgctttctccg
ctcatgcagcccctggctttccactcgcttgtgatgcagagggggnattttacatcaccg
acaaattctcagcagctatacagacacttggctgcggccacacctgtaggaagttcgtac
ggggaccttttgcacaacagcatttaccctttagctgctataaatcctcaagctgccttt
ccatcttcccagctgtcgtctgtacaccccagtacaaaactgtaa
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