KEGG   Sciurus carolinensis (gray squirrel): 124985854
Entry
124985854         CDS       T08117                                 
Name
(RefSeq) LOW QUALITY PROTEIN: AT-rich interactive domain-containing protein 5B-like
  KO
K25857  AT-rich interactive domain-containing protein 5
Organism
ncar  Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ncar03000]
    124985854
Transcription factors [BR:ncar03000]
 Eukaryotic type
  Helix-turn-helix
   ARID
    124985854
SSDB
Motif
Pfam: ARID
Other DBs
NCBI-GeneID: 124985854
NCBI-ProteinID: XP_047410434
LinkDB
Position
5:114252510..114431186
AA seq 1194 aa
MEPNSLQWVGSPCGLHGPYIFYKAFQFHLEGKPRILSLGDFFFVRCTPKDPICIAELQLL
WEERTSRQLLSSSKLYFLPEDTPQGRNSDHGEDEVIAVSEKVIVKLEDLVKWVHSDFSKW
RCGLRAGPVKAEALGRNGQREALLKYRQSTLNSGLNFKDVLKEKADLGEDEEETNVIVLS
YPQYCRYRSMLKRIQDKPSSILTDQFALALGGIAVVSRNPQILYCRDTFDHPTLIENESI
CDEFAPNLKGRPRKKKPCPQRRDSFSGAKDSNNNSDGKAVAKVKCEARSALTKPKNNHTN
CKKVSNEEKPKLAIGEECRADEQAFLVALYKYMKERKTPIERIPYLGFKQINLWTMFQAA
QKLGGYETITARRQWKHIYDELGGNPGSTSAATCTRRHYERLILPYERFIKGEEDKPLPP
IKPRKQENSSQENENKTKVSGTKRIKHEIPKSKKEKENAPKPQDAAEVSSEQEKEQETSN
QKSITEPLPATDLKKKVEGYQDFTARSLASRTDPEKDNETEQGSNSEKEAEEAGEKGPAP
LLPSTPVAPERDPVPIPGSGKQSLTSPSVLVDSKQESKPCCFTESPDNDLQEASFASFPA
TQPPLANQNEIEDDKLPAMADYIANCTVKVDQLGSDDIHNALKQTPKVLVVQSFDMFKDK
DLTGPMNENHGLNYTPLLYSRGNPGIMSPLAKKKLLSQVSGASLSSSYPYGSPPPLISKK
KLIARDDLCSGLSQAHHSQSADHMAVSRPSVIQHVQSFKSKTSEDRKSINDIFKHDKLSR
SDAHRCSFSKHHLNSLADSYVLKQEIQEGKDKLLEKRALPHPHMPSFLADFYSSPHLHSL
YRHTEHHLHSEQTSKYPSRDMYRESENNSFPSHKHQEKLHVNYLTSLHLQDKKLASEKLA
TAEAPTDDQPTDLSLPKNPHKPTGKVLGLAHSATGPQENKGISQFQVISSQSRDCHPKAC
RVSPMTMSAPKKYPESLSRSGKPHHVRLENFRKMEGMVHPILHRKMSPQNIGAARPIKRS
LEDLDLVIAGKKARAVSPXDPSKEVSGKEKASEQESEGGKAAYGGGHSGGGSEGHKLPLS
SPIFPGLYSGGLCNSGLNSRLPAGYSHSLQYLKNQTVLSPLMQPLAFHSLVMQRGXFTSP
TNSQQLYRHLAAATPVGSSYGDLLHNSIYPLAAINPQAAFPSSQLSSVHPSTKL
NT seq 3585 nt   +upstreamnt  +downstreamnt
atggagcccaactcactccagtgggtcggctcaccgtgtggtttgcacggaccttacatt
ttctacaaggcttttcaattccaccttgaaggcaaaccaagaattttgtcccttggcgac
tttttctttgtaagatgtacgccaaaggatccgatttgcatagcggagctccagctgttg
tgggaagaaaggaccagccggcaacttttatccagctctaaactttatttcctccccgaa
gacacaccccagggcagaaatagcgaccatggcgaggatgaagtcattgctgtttccgaa
aaggtgattgtgaagcttgaagacctggtcaagtgggtccattctgatttctccaagtgg
agatgtggcctacgagctgggccagtgaaagcagaggcgttgggaagaaatggtcagcgg
gaagctctgctgaagtataggcagtcaaccctgaacagcggactcaatttcaaagatgtt
ctcaaggaaaaggccgaccttggggaggacgaagaagaaacgaacgtgattgttctcagc
taccctcagtactgccgctaccgctccatgctgaaacgcatccaggataagccatcttcc
attctaactgaccagttcgcactagccctgggtggcattgcagtggtcagcagaaaccct
cagatcctgtactgccgggacacctttgaccaccccactctcatagaaaatgagagtata
tgtgatgaatttgcgccaaatcttaaaggcagaccacgcaaaaagaaaccatgcccacaa
agaagagattcattcagtggagctaaggattccaacaataattccgatggtaaagctgtt
gccaaggtgaaatgtgaggccaggtcagccttgaccaagccgaagaataaccatacaaat
tgtaaaaaagtctccaatgaagaaaaaccaaagctggccattggtgaagagtgcagggca
gatgaacaggcctttttggtggcactttataagtacatgaaagaaaggaaaacgccgata
gaacgaataccctatttaggttttaaacagattaacctttggactatgtttcaagctgct
caaaaactgggaggatatgaaacaataacagcccgccgtcagtggaaacatatttatgat
gaattaggcggtaatcctgggagcaccagcgccgccacttgcacccgcagacattatgaa
agattaatcctaccgtatgaaaggtttattaagggagaggaagataagcccttgcctcca
atcaaacctcgaaaacaggagaacagttcacaggaaaatgaaaataaaacaaaagtatca
ggaaccaagcgcatcaaacatgaaatacctaagagcaagaaagaaaaagagaatgcccca
aagccccaggatgcagcagaggtttcatcagagcaagagaaagaacaagagacttcaaac
cagaaaagcatcacagagcctctcccggcaactgacttgaagaaaaaagtggaagggtac
caggattttacagcgagatccctggcatccagaacagacccagaaaaagacaatgaaaca
gagcaaggttccaacagtgagaaagaggccgaggaggcaggagagaaaggacctgcacct
ctgctcccgagcacacctgtggctccagaaagggatccagttccaatccctggatctggc
aaacagtccctcacctctcctagtgtcctggtagactcaaagcaagaatccaaaccctgc
tgttttacagagagccctgacaatgacctccaagaagcatcctttgccagcttccccgct
actcagccaccactggcaaaccagaatgagatagaggatgacaaactgcccgccatggcg
gattacatcgccaactgcactgtgaaggtggaccagttgggcagcgacgacatccacaat
gcactaaagcagaccccaaaggtccttgtggtccagtcatttgacatgttcaaggacaaa
gacctgactgggcccatgaatgagaaccatggactcaattacacacccctgctttactcc
aggggtaacccaggcatcatgtccccactagccaagaaaaagctcttgtcgcaggtgagt
ggggccagcctttccagcagctacccctatggctccccaccccctttgatcagcaaaaag
aaattgatagccagggatgatttgtgttcaggtttgtcccaggcccaccacagtcaaagc
gccgaccacatggcggtcagccggccatcagtgattcagcacgtccagagtttcaaaagc
aagacctcggaggacagaaagagcatcaatgacatttttaagcatgacaagctcagtcga
tcagacgcccaccgctgcagcttctccaagcatcacctgaactccttggctgactcctat
gtcctgaagcaagaaattcaggagggtaaggataaactcttagagaagagggcactcccc
catccccacatgcccagcttcctggcagatttctactcatccccgcatctccacagtctc
tatcgacacaccgaacaccatcttcatagtgaacagacatccaagtacccttctagggac
atgtacagggaatcggaaaacaattcttttccttcccacaaacaccaagaaaagctccat
gtaaattatctcacgtctctgcatctgcaagacaaaaagttggcctcggaaaagttggcc
accgcagaagcccctacagatgatcagccgacggatctgagccttcccaaaaacccacat
aaaccaaccggcaaggtcctgggcctggcccactcagccacaggaccccaggagaacaaa
ggcatctcccagttccaggtcatcagcagccagagtcgagactgccaccccaaggcctgt
cgagtatcacccatgaccatgtcagcacctaaaaagtaccccgagtcactttcgagatcg
ggtaaacctcaccacgtgagactggagaatttcagaaagatggaaggcatggtccatccc
atcctgcaccgaaaaatgagccctcagaacattggtgcagcacgtcccataaagcgcagc
ctggaggatttggaccttgtgattgctgggaaaaaggcccgggcagtgtctcccntggac
ccgtccaaggaggtttctgggaaagaaaaggcctctgagcaggagagtgaaggcggcaag
gcagcctacggtggtgggcattctgggggcggatctgagggccacaagcttcccctctcc
tcccccatcttcccaggtttgtattctgggggcctgtgtaactcgggcctcaactccagg
ctcccagctgggtattctcattctctgcagtacttgaaaaaccaaactgtgctttctccg
ctcatgcagcccctggctttccactcgcttgtgatgcagagggggnattttacatcaccg
acaaattctcagcagctatacagacacttggctgcggccacacctgtaggaagttcgtac
ggggaccttttgcacaacagcatttaccctttagctgctataaatcctcaagctgccttt
ccatcttcccagctgtcgtctgtacaccccagtacaaaactgtaa

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