Sciurus carolinensis (gray squirrel): 124985938
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Entry
124985938 CDS
T08117
Name
(RefSeq) high affinity nerve growth factor receptor isoform X1
KO
K03176
neurotrophic tyrosine kinase receptor type 1 [EC:
2.7.10.1
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04010
MAPK signaling pathway
ncar04014
Ras signaling pathway
ncar04020
Calcium signaling pathway
ncar04151
PI3K-Akt signaling pathway
ncar04210
Apoptosis
ncar04722
Neurotrophin signaling pathway
ncar04750
Inflammatory mediator regulation of TRP channels
ncar05200
Pathways in cancer
ncar05202
Transcriptional misregulation in cancer
ncar05216
Thyroid cancer
ncar05230
Central carbon metabolism in cancer
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
124985938
04014 Ras signaling pathway
124985938
04020 Calcium signaling pathway
124985938
04151 PI3K-Akt signaling pathway
124985938
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
124985938
09150 Organismal Systems
09156 Nervous system
04722 Neurotrophin signaling pathway
124985938
09157 Sensory system
04750 Inflammatory mediator regulation of TRP channels
124985938
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
124985938
05202 Transcriptional misregulation in cancer
124985938
05230 Central carbon metabolism in cancer
124985938
09162 Cancer: specific types
05216 Thyroid cancer
124985938
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ncar01001
]
124985938
Enzymes [BR:
ncar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
124985938
Protein kinases [BR:
ncar01001
]
Receptor tyrosine kinases (RTK)
TRK family [OT]
124985938
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
LRRCT_2
I-set
LRR_8
Ig_3
TrkA_TMD
LRR_NXF1-5
LRR_4
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
124985938
NCBI-ProteinID:
XP_047410560
LinkDB
All DBs
Position
1:complement(93335369..93355093)
Genome browser
AA seq
799 aa
AA seq
DB search
MLRGGPRGQLGWHRRLARPSSLLAWLMLASAGAASCPDVCCPFGPSGLRCSKAGTLHSLR
QLPTAENLTELYVENQQHLHGLELGDLQGLGQLRNLTIVKSGLHFVAPDAFHLTPRLSRL
NLSFNALESLSWKTVQGLSLQELVLSGNPLRCSCALHWLQRWEEEGLGGVRAQRLQCSGP
REQPLALSHNTSCGVPTLKVQMSNASVEVGDNVLLQCHVEGQGLQQAGWILTELEGSATV
TKSGNLPSLGLTLANVTSDLNRKNVTCWAENDVGRAEVSVQVNVSFPASVQLDTAVELHH
WCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPALANETMRHGCLRLNQPTHVNNG
NYTLLATNPYGQAADYVMAAFMDNPFEFNPEDPIPVSFSPVDTNSTSRDPVEKKDETPFG
VSVAVGLAVFACLFLSALLLVLNKCGRRNKFGINRPAVLAPEDGLAMSLHFMTLGGSSLS
PTEGKGSGLQGHIIENPQYFSDACVHHIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQD
KMLVAVKALKEVSESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDL
NRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAIASQVAAGMVYLASLHFVHRDLATRNCL
VGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVL
WEIFTYGKQPWYQLSNTEAIECITQGRELERPRACPPEVYAIMRGCWQREPQHRHSIKDV
HARLQALAQAPPVYLDVLG
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgctgcggggcggaccgcgcgggcagctcggctggcaccgccgccttgcacggccgagc
agcctgctggcttggctgatgctggcatctgcgggcgctgcatcttgccccgatgtctgc
tgcccctttggcccctcggggctgcgctgttccaaggctgggaccctccatagcctccgc
caactgccgaccgccgagaacctgacagagctctacgtggagaatcagcagcatctacac
ggcctggagctcggtgacctgcagggcctggggcagctaagaaacctcaccatcgtgaag
agtgggctccattttgtggcaccagatgccttccatttgactcctcggctcagtcgcctg
aatctctccttcaatgccctggagtctctctcctggaaaaccgtgcagggcctctcctta
caggagctggtcctgtcggggaacccgctgcgctgttcctgtgccctgcactggctgcag
cgctgggaggaggaggggctcggcggcgtgcgtgcccagaggctgcagtgctcgggaccc
agagagcagcccctggccctcagtcacaacaccagctgcggtgtgcccacgctgaaggtc
cagatgtccaatgcctcagtggaagttggggacaatgtgttgctgcagtgccatgtggag
gggcagggcctgcagcaggctggatggatcctcacggagctggagggatcagccacagtg
acgaaatctgggaatctgccgtccctggggctgaccctcgccaatgtcaccagtgacctg
aacaggaagaatgtgacgtgctgggcagagaatgatgtgggccgggctgaggtctctgtc
caggtcaacgtctccttcccagccagtgtgcagttggatacagcggtggagctacatcac
tggtgcatccccttctccgtggacgggcagccggcgccctccctacgctggctcttcaat
ggctccgtgctcaatgagaccagcttcatcttcactgagttcctggagccagccttggcc
aatgagaccatgaggcatggctgccttcgcctcaaccagcccacccacgtcaataatggc
aactacacgctgctggccaccaatccctatggccaggccgccgactacgtcatggctgcc
ttcatggacaacccctttgagttcaaccccgaggaccccatccctgtctccttctcccca
gtggacactaacagtacctccagagacccagtggagaagaaggatgagacgccttttggg
gtttccgtggccgtcggcctggccgtctttgcctgcctcttcctttctgcgctgctcctt
gtgctcaacaaatgcggacggagaaacaagtttgggatcaaccgccctgctgtgctggct
ccagaggatggactggccatgtctctgcatttcatgacattgggtggcagctctctttct
cctactgagggcaaaggctccgggctccaaggtcacatcattgagaatccacaatacttc
agtgatgcctgtgtccatcacatcaagcgccgggacatcgtgctcaagtgggagctgggc
gagggtgcctttggcaaggtcttcctggccgagtgccacaacctgctgcctgagcaggac
aagatgctggtggctgtcaaggcgttgaaggaggtgtccgagagcgctcggcaggacttc
cagcgcgaggccgagctgctgaccatgctgcagcaccagcacatcgtgcgcttcttcggc
gtctgcaccgagggccgcccactgctcatggtctttgagtatatgcggcatggggacctc
aaccgcttcctccggtcccatgggcctgatgctaagctgcttgctggtggagaggatgtg
gctccaggccccctgggccttgggcagctgctggccattgctagccaggtggctgcaggg
atggtgtacctggccagtttgcattttgtgcaccgggacctggccacacgcaactgtctg
gtgggtcagggattagtggtcaagatcggcgatttcggcatgagcagggatatctacagc
actgactattaccgagtgggaggccggaccatgctgcccatccgctggatgccgccggag
agcatcctctaccgcaagttcactacggagagcgacgtgtggagcttcggggtggtgctc
tgggagatcttcacctacggcaaacagccctggtaccagctgtccaacaccgaggcgatc
gagtgcatcacgcagggccgggagttggagcggccgcgcgcctgccccccagaggtctat
gccatcatgcgtggctgctggcagcgggagccgcagcaccgccacagcatcaaggatgtg
cacgcccggctgcaagccctggcccaggcgcctcccgtctacctggacgtcctgggctag
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