Sciurus carolinensis (gray squirrel): 124986497
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Entry
124986497 CDS
T08117
Name
(RefSeq) protein pelota homolog
KO
K06965
protein pelota
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124986497
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncar03019
]
124986497
Messenger RNA biogenesis [BR:
ncar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
124986497
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_1
eRF1_2
eRF1_3
Motif
Other DBs
NCBI-GeneID:
124986497
NCBI-ProteinID:
XP_047410827
LinkDB
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Position
6:42066637..42070723
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AA seq
385 aa
AA seq
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MKLVRKDIEKDNAGQVTLVPEEPEDMWHTYNLVQVGDSLRASTIRKVQTESSTGSVGSNR
VRTTLTLCVEAIDFDSQACQLRVKGTNIQENEYVKMGAYHTIELEPNRQFTLAKKQWDSV
VLERIEQACDPAWSADVAAVVMQEGLAHICLVTPSMTLTRAKVEVNIPRKRKGNCSQHDR
ALERFYEQVVQAIQRHINFDVVKCVLVASPGFVREQFCDYMFQQAVKTDNKVLLENRSKF
LQVHASSGHKYSLKEALCDPTVASRLSDTKAAGEVKALDDFYKMLQHEPDRAFYGLKQVE
KANEAMAIDTLLISDELFRHQDVATRSRYVRLVDSVKENAGTVRIFSSLHVSGEQLSQLT
GVAAILRFPVPELSDQEDDSSSDED
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcgtgaggaaggacattgagaaggacaatgcggggcaggtgaccctggtccct
gaggaacctgaggacatgtggcacacttacaatctagtacaggtgggcgacagccttcgc
gcctccactatccgtaaggtacagaccgagtcctccacaggcagcgtgggaagcaaccgc
gtccgtactacgctcactctctgcgtggaagccatcgactttgactctcaagcctgccag
ctgcgggtcaaagggaccaatatccaagagaatgagtatgtcaagatgggagcttaccac
accatcgagctggagcccaaccgccagttcaccctggccaagaaacagtgggatagtgtg
gttctggagcgcattgagcaggcctgtgacccggcctggagtgctgatgtggcagctgtg
gtcatgcaggaaggcctcgcccatatctgcttagtcactcccagcatgaccctcactcgt
gccaaggtggaggtgaacatccctagaaaaaggaaaggcaactgctcccagcatgatcga
gctttggagcggttctatgaacaggtggtccaggccatacagcgccacataaacttcgat
gttgtaaagtgtgtcctggtggccagcccaggatttgtgcgggaacagttctgcgactac
atgtttcaacaagcagtgaagacagacaacaaagttctcctggaaaaccggtccaaattc
cttcaggtacatgcctcctctggacacaagtactccctgaaagaggccctttgtgaccct
actgtagctagccgcctttcagacactaaagctgctggggaagttaaagccttggatgac
ttctataaaatgttacaacatgaacctgaccgagctttctatggactcaagcaagtggag
aaggccaatgaagcaatggctattgacacactgctcatcagtgatgagctcttcagacac
caggatgtagccacacgcagccggtatgtaaggctggtggacagtgtgaaagagaatgca
ggaactgttaggatattctctagccttcatgtatctggggaacagctcagccaactgact
ggagtagccgccattcttcgctttcctgttcctgaactttctgaccaagaggatgattcc
agttctgatgaagactaa
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