KEGG   Sciurus carolinensis (gray squirrel): 124986497
Entry
124986497         CDS       T08117                                 
Name
(RefSeq) protein pelota homolog
  KO
K06965  protein pelota
Organism
ncar  Sciurus carolinensis (gray squirrel)
Pathway
ncar03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    124986497
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ncar03019]
    124986497
Messenger RNA biogenesis [BR:ncar03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     124986497
SSDB
Motif
Pfam: eRF1_1 eRF1_2 eRF1_3
Other DBs
NCBI-GeneID: 124986497
NCBI-ProteinID: XP_047410827
LinkDB
Position
6:42066637..42070723
AA seq 385 aa
MKLVRKDIEKDNAGQVTLVPEEPEDMWHTYNLVQVGDSLRASTIRKVQTESSTGSVGSNR
VRTTLTLCVEAIDFDSQACQLRVKGTNIQENEYVKMGAYHTIELEPNRQFTLAKKQWDSV
VLERIEQACDPAWSADVAAVVMQEGLAHICLVTPSMTLTRAKVEVNIPRKRKGNCSQHDR
ALERFYEQVVQAIQRHINFDVVKCVLVASPGFVREQFCDYMFQQAVKTDNKVLLENRSKF
LQVHASSGHKYSLKEALCDPTVASRLSDTKAAGEVKALDDFYKMLQHEPDRAFYGLKQVE
KANEAMAIDTLLISDELFRHQDVATRSRYVRLVDSVKENAGTVRIFSSLHVSGEQLSQLT
GVAAILRFPVPELSDQEDDSSSDED
NT seq 1158 nt   +upstreamnt  +downstreamnt
atgaagctcgtgaggaaggacattgagaaggacaatgcggggcaggtgaccctggtccct
gaggaacctgaggacatgtggcacacttacaatctagtacaggtgggcgacagccttcgc
gcctccactatccgtaaggtacagaccgagtcctccacaggcagcgtgggaagcaaccgc
gtccgtactacgctcactctctgcgtggaagccatcgactttgactctcaagcctgccag
ctgcgggtcaaagggaccaatatccaagagaatgagtatgtcaagatgggagcttaccac
accatcgagctggagcccaaccgccagttcaccctggccaagaaacagtgggatagtgtg
gttctggagcgcattgagcaggcctgtgacccggcctggagtgctgatgtggcagctgtg
gtcatgcaggaaggcctcgcccatatctgcttagtcactcccagcatgaccctcactcgt
gccaaggtggaggtgaacatccctagaaaaaggaaaggcaactgctcccagcatgatcga
gctttggagcggttctatgaacaggtggtccaggccatacagcgccacataaacttcgat
gttgtaaagtgtgtcctggtggccagcccaggatttgtgcgggaacagttctgcgactac
atgtttcaacaagcagtgaagacagacaacaaagttctcctggaaaaccggtccaaattc
cttcaggtacatgcctcctctggacacaagtactccctgaaagaggccctttgtgaccct
actgtagctagccgcctttcagacactaaagctgctggggaagttaaagccttggatgac
ttctataaaatgttacaacatgaacctgaccgagctttctatggactcaagcaagtggag
aaggccaatgaagcaatggctattgacacactgctcatcagtgatgagctcttcagacac
caggatgtagccacacgcagccggtatgtaaggctggtggacagtgtgaaagagaatgca
ggaactgttaggatattctctagccttcatgtatctggggaacagctcagccaactgact
ggagtagccgccattcttcgctttcctgttcctgaactttctgaccaagaggatgattcc
agttctgatgaagactaa

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