KEGG   Sciurus carolinensis (gray squirrel): 124986508
Entry
124986508         CDS       T08117                                 
Name
(RefSeq) RNA polymerase II elongation factor ELL2
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
ncar  Sciurus carolinensis (gray squirrel)
Pathway
ncar03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    124986508
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ncar01009]
    124986508
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ncar03021]
    124986508
Protein phosphatases and associated proteins [BR:ncar01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     124986508
Transcription machinery [BR:ncar03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     124986508
    Little elongation complex (LEC)
     124986508
SSDB
Motif
Pfam: ELL Occludin_ELL UBR1-like_wing
Other DBs
NCBI-GeneID: 124986508
NCBI-ProteinID: XP_047410844
LinkDB
Position
6:complement(80398930..80469220)
AA seq 640 aa
MAAGGAAGLREEQRYGLSCGRLGQDNITVLHVKLTETAIRALETYQSHKNLIPFRPSIQF
QGLQGLVKIPKSDPLNEVHNFNFYLSNVGKDNPQGSFDCIQQTFSSSGASQLNCLGFIQD
KITVCATNDSYQMTRERMTQAEEESRNRSTKVIKPGGPYVGKRVQIRKAPQAISDTVPER
KRSTPMNPANTIRKTHGGSSVSQRPYRDRVIHLLALKTYKKPELLARLQKDGVNQKDKNS
LGAILQQVANLNPKDLSYTLKDYVFKELQRDWPGYNETDRRLLESVLSRKLNPSQNSAGP
SHSESPVCSSRDAASSPQKRPLDSDFIDPLVNKKARISHLTNRVQPTLNGHLNSTSDKSA
AGLLPPPAAAAIPTPPPLPSTHLPVSNPPQTVNSNSNSPSTPEGRGTQDLPVDSFSQNGS
IYEDQQDKYTSRTSLETLPPGSVLLKCPKPMEENHSMSHKKSKKKSKKHKEKDQIKKHDI
ETIEEKEEDVQREETAKLSNSSPNSNEGVRAGCTASMEPSSTIELPDYLIKYIAIVSYEQ
RQNYKDDFNAEYDEYRALHARMETVARRFIKLDAQRKRLSPGSKEYQNVHEEVLQEYQKI
KQSSPNYHEEKYRCEYLHNKLAHIKRLIGEFDQQQAESWH
NT seq 1923 nt   +upstreamnt  +downstreamnt
atggcggcagggggggcggcgggcctgcgggaggagcagcgatatggactgtcgtgcggg
cggctagggcaggacaacatcaccgtactgcatgtgaagctcaccgagacagcgatccgg
gcgctcgagacttaccagagccacaagaatttaattccttttcgaccttcgattcagttc
caagggcttcaagggcttgtcaaaattcccaaaagtgatcccctcaatgaagtacataac
tttaacttctatttgtcaaatgtgggcaaagacaaccctcagggcagctttgactgcatc
cagcaaacattctccagctctggagcctcccagctcaattgcctgggatttatacaagat
aaaattacagtgtgtgcaacaaacgactcatatcagatgacacgagaaagaatgacccag
gcagaggaggaatcccgcaatcgaagcacaaaagttatcaaacccggtggaccatatgta
gggaaaagagtgcaaattcggaaagcacctcaagccatctcagacacagtgccggagagg
aaaaggtcaacccccatgaaccctgcaaatacaattcgaaagactcatggcggcagcagt
gtttctcagcggccatatagagacagggtgattcacttactggcactaaagacctacaag
aaacccgagctcctggctcgactacagaaagatggagtcaatcaaaaggacaagaactcc
ctgggagcaattctgcaacaggtagccaatctgaatccgaaagacctctcctacacttta
aaggattatgtgtttaaggagctgcagcgagactggccaggatacaatgaaacagacaga
cggttattggagtcagtgctctctagaaaactaaatccatctcagaattctgctggcccc
agtcattcagaatctcctgtatgttctagcagagatgctgcatcctctcctcagaaacgg
cctttggattccgattttattgatcctttagtgaataaaaaagctcgaatatctcacctg
acaaatagagtacagccaacattaaatggtcatttgaattccaccagtgacaaatctgct
gcaggcctcctgccaccccctgcagctgctgccatccccacccctccaccgctgccttca
actcatctgcctgtctcaaatcctcctcagactgtaaattcaaactccaattcccctagc
actccagaaggccgggggactcaagacctacctgttgacagttttagtcaaaatggtagt
atctatgaggaccagcaagacaaatatacctctaggacttctctggaaaccttaccccct
ggttcagttctgctaaagtgtccaaagcctatggaagaaaaccattcgatgtctcacaaa
aagtccaaaaagaagtctaagaaacacaaggaaaaggaccaaataaaaaagcacgacatt
gaaactattgaggaaaaggaggaagatgttcaaagagaagaaactgccaagctgagtaac
tccagtccaaattctaatgaaggagttagagcgggttgcactgcctccatggagccttct
tcaacaattgaactcccagattatttgataaaatatattgctattgtctcctatgagcaa
cgccagaattacaaggatgacttcaatgctgagtacgacgaatacagggctttgcatgcc
aggatggagacggtagctagaagatttatcaaactggatgcgcaacgaaaacgcctttct
ccaggctcaaaagagtatcagaatgttcatgaagaagtcttacaagaatatcagaagatc
aagcagtctagtcccaattaccatgaagaaaaatacagatgcgagtatcttcataacaag
ctggctcacatcaaaagactaataggtgaatttgaccaacagcaagcagagtcatggcac
tag

DBGET integrated database retrieval system