Sciurus carolinensis (gray squirrel): 124986518
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Entry
124986518 CDS
T08117
Name
(RefSeq) cyclic AMP-dependent transcription factor ATF-6 alpha isoform X1
KO
K09054
cyclic AMP-dependent transcription factor ATF-6 alpha
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04141
Protein processing in endoplasmic reticulum
ncar05010
Alzheimer disease
ncar05012
Parkinson disease
ncar05014
Amyotrophic lateral sclerosis
ncar05022
Pathways of neurodegeneration - multiple diseases
ncar05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
124986518
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
124986518
05012 Parkinson disease
124986518
05014 Amyotrophic lateral sclerosis
124986518
05022 Pathways of neurodegeneration - multiple diseases
124986518
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
124986518
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncar03000
]
124986518
Transcription factors [BR:
ncar03000
]
Eukaryotic type
Basic leucine zipper (bZIP)
CREB
124986518
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bZIP_1
bZIP_2
bZIP_Maf
Rab11-FIP3
Cep57_CLD_2
CCDC138_cc
ZapB
Docking
Motif
Other DBs
NCBI-GeneID:
124986518
NCBI-ProteinID:
XP_047410861
LinkDB
All DBs
Position
1:complement(88108717..88393165)
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AA seq
659 aa
AA seq
DB search
MESPFSPGLSHRPDEEWDSTLFAELGYFTDTDDLQLDAANETYENNFDHLDFDLDLMPWE
SDIWGINNQFCTVKDIKTEPQPLSPASSSCSISSPQSVDSCSSTQHVPEELDLSSSSQMS
PLSLYGENCNSPSSAEPLREDKPIIGPRSKTENGLTPKKKIQMSSKPSIQPKPLLLPAAP
KTQTNSSVPAKTIIIQTLPTLMPLTKQQSIISIQPAPTKGQTVLLSQPTVVQLQAPGVLP
SAQLVLAVTGGATQLPNHVVNVVPAPVVNSSVNGKLSVTKPVLQSPMKSVGSDIAVLRRQ
QRMIKNRESACQSRKKKKEYMLGLEARLKAALSENEQLKKENGSLKRQLDEVVSENQRLK
VPSPKRRAICVMIVLAFVILNYGPMSMLEQDSRRMNPSMSPANQRRHLLEFSAKEVQDTS
DGIIQKNSYRYDHSVSNDKALMVLSEEPLLYIPPPPCQPLINTTESLRLNHELRGWVHRH
EVERTKSRRMTNNQQKTRVLQGTLEQGSNSQLMAVQYTETTSISRNSGNELQVYYASPRS
YQDFFEAIHRRGDTFYVVSFRRDHLLLPATTHNKTTRPKMSIVLPAININENVINGQDYE
VMMQIDCQVMDTRILHIKSSSVPPYLRDQQRNQTNTFFGSPPAATKATHVVSTIPESLQ
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgccttttagcccgggactctctcacagaccagatgaggagtgggattctacc
ctgtttgctgaacttggttatttcacagacactgatgatctacagttggatgcagcaaat
gagacttatgaaaataattttgatcatcttgattttgacttggatttgatgccttgggaa
tcagacatttggggcatcaacaatcaattctgtacagttaaagatattaagacagaacct
caaccactttctccagcttcctcaagttgttcaatctcatctcctcagtcagtggactct
tgttcttcaactcagcatgttcctgaggagttggatttgtcttctagttcccagatgtct
cccctttccttatatggtgaaaactgtaatagtccttcctcagcagaaccactaagagaa
gataagcccatcattggtcctaggagcaaaactgaaaatggactaactccaaagaaaaaa
attcagatgagttcaaaaccttcaattcagcccaagcctttattactcccagcagcaccg
aagactcaaacaaactccagtgttccagcaaaaactatcattattcagacactaccaaca
cttatgccattgacaaagcagcagtcaattatcagcatacagcctgcacccactaaaggt
cagactgttttgctctctcagcctactgtggtacaacttcaggcacctggagttctgcct
tctgctcagcttgtccttgctgtgactgggggagccacacagctacctaaccatgtggtg
aatgtagttccggcccctgtggtgaacagctcagtgaatggaaaactttctgtaactaaa
cctgtgctacaaagtcccatgaaaagtgtgggttcagatattgctgtgctaaggaggcag
caacggatgataaaaaatcgagagtcggcttgtcagtcgcgcaagaaaaagaaagaatat
atgctagggttagaggctagattaaaggctgccctttcagagaatgagcaactgaagaaa
gagaatgggtcactgaaacgacagttggatgaagttgtatcagagaaccagaggcttaaa
gtccctagtccaaagcgaagagctatctgtgtcatgatagtattggcatttgtaatactg
aactatggacccatgagcatgctggaacaggattccagaagaatgaaccctagtatgagc
cctgcaaatcaaaggaggcaccttttagaattttctgctaaagaagtacaggacacatca
gatggtatcatccagaaaaacagctacagatatgatcattctgtttcaaatgacaaggcc
ctaatggtgctaagtgaagaaccactactttatattcctcctcctccttgccaacccctg
attaacacaacagaatctctcaggttaaatcatgaacttcgaggttgggttcatagacac
gaagtggaaaggaccaagtcaagaagaatgacaaataatcaacagaaaacccgtgttcta
cagggtactctggaacagggctcaaattctcagttgatggctgtccaatacacagaaacc
actagtatcagtaggaactcagggaatgagctgcaagtgtattatgcttcacccagaagt
tatcaagacttctttgaagccatccacagaaggggagacacattttatgttgtgtcattt
cgaagggatcacctactgttaccagctaccacccataacaagaccaccagaccaaaaatg
tcaattgtattaccagcaataaacataaatgaaaacgtgatcaatggtcaggattatgaa
gtgatgatgcaaattgattgtcaggtgatggacaccaggatcctccacatcaaaagctcc
tccgtccctccttacctccgagatcagcagaggaatcaaaccaacaccttctttggttct
cctccagcagccaccaaggcaacccatgttgtcagcaccatccctgaatcattacagtag
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