Sciurus carolinensis (gray squirrel): 124986526
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Entry
124986526 CDS
T08117
Name
(RefSeq) myocyte-specific enhancer factor 2C isoform X1
KO
K04454
MADS-box transcription enhancer factor 2C
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04010
MAPK signaling pathway
ncar04022
cGMP-PKG signaling pathway
ncar04371
Apelin signaling pathway
ncar04921
Oxytocin signaling pathway
ncar04928
Parathyroid hormone synthesis, secretion and action
ncar05202
Transcriptional misregulation in cancer
ncar05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
124986526
04371 Apelin signaling pathway
124986526
04022 cGMP-PKG signaling pathway
124986526
09150 Organismal Systems
09152 Endocrine system
04921 Oxytocin signaling pathway
124986526
04928 Parathyroid hormone synthesis, secretion and action
124986526
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
124986526
09166 Cardiovascular disease
05418 Fluid shear stress and atherosclerosis
124986526
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncar03000
]
124986526
Transcription factors [BR:
ncar03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, MEF-2
124986526
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRF-TF
HJURP_C
Motif
Other DBs
NCBI-GeneID:
124986526
NCBI-ProteinID:
XP_047410867
EnsemblRapid:
ENSSCRG00010006153
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Position
6:complement(73794714..73955866)
Genome browser
AA seq
465 aa
AA seq
DB search
MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSTNKLFQYAST
DMDKVLLKYTEYNEPHESRTNSDIVETLRKKGLNGCDSPDPDADDSVGHSPESEDKYRKI
NEDIDLMISRQRLCAVPPPNFEMPVSIPVSSHNSLVYSNPVSSLGNPNLLPLAHPSLQRN
SMSPGVTHRPPSAGNTGGLMGGDLTSGAGTSAGNGYGNPRNSPGLLVSPGNLNKNMQAKS
PPPMNLGMNNRKPDLRVLIPPGSKNTMPSVNQRINNSQSAQSLATPVVSVATPTLPGQGM
GGYPSAISTTYGTEYSLSSADLSSLSGFNTASALHLGSVTGWQQQHLHNMPPSALSQLGA
CTSTHLSQSSNLSLPSTQSLNIKSEPVSPPRDRTTTPSRYPQHTRHEAGRSPVDSLSSCS
SSYDGSDREDHRNEFHSPIGLTRPSPDERESPSVKRMRLSEGWAT
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggggagaaaaaagattcagattacgaggattatggatgaacgtaacagacaggtgaca
tttacaaagaggaaatttgggttgatgaagaaagcttacgagctgagtgtgctgtgtgac
tgtgagattgcactgatcatcttcaacagcaccaacaagctgttccagtacgccagcacc
gacatggacaaggtgctgctcaagtacacggagtacaatgagccgcatgagagccggaca
aactcggacatcgtggagacgttgagaaagaagggccttaatggctgtgacagcccagat
cccgatgcggacgattcagtaggtcacagccctgagtctgaggacaagtacaggaaaatt
aacgaagatattgatctaatgatcagcaggcaaagattgtgtgctgttccacctcccaac
tttgagatgccagtttccatcccagtgtccagccataatagtttggtatacagcaaccct
gtcagctcactgggaaaccccaaccttttgccactggcccacccttctctgcagaggaat
agtatgtctcctggtgtaacacatcgacctcccagtgcaggtaacacaggtggtctgatg
ggtggagacctcacatccggtgcaggcaccagcgcagggaatgggtatggcaatccccga
aactcaccaggtctgctggtctcacctggtaacttgaacaagaatatgcaagcaaaatct
cctccccccatgaatttaggaatgaataaccgtaaaccagatctccgagtccttattcca
cctggcagcaagaataccatgccatcagtgaatcaaaggataaataactcccagtctgct
cagtcattggctaccccagtggtttccgtagcaactcctactttaccaggacaaggaatg
ggaggatatccatcagccatttcaacaacatatggtaccgagtattctctgagtagtgca
gatctgtcatctctgtctgggtttaacactgccagtgctcttcaccttggttcagtaact
ggctggcaacagcaacacctacataacatgccaccatccgccctcagtcagttgggagct
tgcactagcactcatttatctcagagttcaaatctctccctgccttctactcaaagcctc
aacatcaagtcagaacctgtttctcctcctagagaccgtaccaccaccccttcgagatac
ccacaacacacgcgccacgaggcggggagatctcctgttgacagcttgagcagctgtagc
agttcctacgacgggagcgaccgagaggatcaccggaatgaattccactcccccattgga
ctcaccagaccttcgccggacgaaagggaaagtccctcagtcaagcgcatgcgactctct
gaaggatgggcaacatga
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