Sciurus carolinensis (gray squirrel): 124986547
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Entry
124986547 CDS
T08117
Name
(RefSeq) microtubule-associated protein 1B isoform X1
KO
K10429
microtubule-associated protein 1
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
124986547
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ncar01009
]
124986547
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ncar04812
]
124986547
Protein phosphatases and associated proteins [BR:
ncar01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
124986547
Cytoskeleton proteins [BR:
ncar04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
124986547
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAPB1_N
MAP1B_neuraxin
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-GeneID:
124986547
NCBI-ProteinID:
XP_047410904
LinkDB
All DBs
Position
6:complement(61981635..62086111)
Genome browser
AA seq
2470 aa
AA seq
DB search
MATVVVEATESEPSGSIANPAASTSPSLSHRFLDSKFYLLVVVGETVTEEHLRRAIGNIE
LGIRSWDTNLIECNLDQELKLFVSRHSARFSPEVPGQKILHHRSDVLETVVLINPSDEAV
STEVRLMITDAARHKLLVLTGQCFENTGELILQSGSFSFQNFIEIFTDQEIGELLSTTHP
ANKASLTLFCPEEGDWKNSNLDRHNLQDFINIKLNSASILPEMEGLSEFTEYLSESVEVP
SPFDILEPPTSGGFLKLSKPCCYIFPGGRGDSALFAVNGFNMLINGGSERKSCFWKLIRH
LDRVDSILLTHIGDDNLPGINSMLQRKIAELEEEQSQGSTTNSDWMKNLISPDLGVVFLN
VPENLKNPEPNIKMKRSIEEACFTLQYLNKLSMKPEPLFRSVGNTIDPVILFQKMGVGKL
EMYVLNPVKSSKEMQYFMQQWTGTNKDKAELILPNGQEVDIPISYLTSVSSLIVWHPANP
AEKIIRVLFPGNSTQYNILEGLEKLKHLDFLKQPLATQKDLTGQVPTPTVKQVKLKQRAD
SRESLKPAAKPLATKSVRKESKEETPEVTKTNQVEKPPKVESKEKVIVKKDKPVKTETKP
PVTEKEAPSKEEQPPTKAEVTEKQATDVKPKTAKEKTVKKEIKAKPEEKKEEKEKPKKEV
AKKEEKTPIKKEEKPKKEEVKKEVKKEVKKEEKKEPKKEVKKETPLKEAKKEVKKDEKKE
IKKEEKEPKKEIKKLPKDSKKPSTPLSDVKKPATLKPKVPKKEESVKKEAVAAGKPKEKG
KIKVVKKEGKTAEAAAAAVSTVATTAAAVAAAGIAATGPAKELEAERSLMSSPEDLTKDF
EELKAEEIDVAKDIKPQLELIEDEEKLKETEPVEAYVIQKETEVIKGSAESPDEGITTTE
GEGECEQTPEELEPVEKQGVDDIEKFEDEGAGFEESSETGDYEEKAETEEAEEPEEDGEE
NVCMSTSKHSPIEDEESAKAEADVHIKEKRESVTSGDDRAEEDMDEAVEKGEVEQSEEEE
AEEEDKAEDAREEYEPEKIEAEDYVMAVVDKAAEAGGAEDQYGFLTTSTKQPGAQSPGRE
PASSIHDETLPGGSESEATASDEENREDQPEEFTATSGYTQSTIEISSEPTPMDEMSTPR
DVMSDETNNEETESPSQEFINITKYESSLYSQEYSKTTVTPFNGLSDGSKTDATEGKDYN
ASASTISPPSSMEEDKFSKSALRDAYYSEEKEVKGSAMLEIRDTTSTVSDEKLSPAKSPS
LSPSPPSPIEKTPLGERSVNFSLTPNEIKVSTEAEVVPVSPEVTQEVVEEHCASPEEKTL
EVVSPSQSVTGSAGHTPYYQSPTEEKASHLPTEATEKPAAVPVSFEFSDAKDESERASIS
PMDEPVPDSESPMEKVLSPLRSPPLIGSESAYESFLSADVKAPGRCTESPFEGKNGKQDI
ANQISPVSEMTSTGLYQDKQEVKSTDFTPIKEDFVPEKKTDDVEAMSSQPALALDERKLG
GDVSPTQIDVSQFGSFKEDTKMSISEGTVSDKSATPVDEGVAEDTYSHMEGVASVSTASV
ATSSFPEPTTDDVSPSLHAEVGSPHSTEVDDSLSVSVVQTPTTFQETEMSPSKEECPRPM
SISPPDFSPKTAKSRTPVQDHRSEQSSMSIEFGQESPEHSLAMDFSRQSPDHPAVGASML
HITENGPTEVDYSPSDLQDSSLSHKIPPTEEPSYTQDNDLSELISVSQVEASPSTSSAHT
PSQIASPLQEETLSDVAPPREMSLYASLTSEKEQSLEGEKLSPKSDISPLTPRESSPLYS
PGFSDSTSAVKENAAACHTSSSPPIDAASAEPYGFRASMLFDTMQHHLALNRDLTTSGME
KDNGGKTPGDFSYVYQKSEKTTRSPDEEDYDYESCEKTTRTPDVGSYYYEKTERTVKSPC
DGGYSYETIEKTTKTPEDGGYACEITEKTTRTPEEGGYSYEISEKTMRTPEVSGYSYEKT
ERARRLLDDISNGYDDSEDGGHTLGDASYSYETTEKITSFPESESYSYETSTKTTRSPDT
STYCYETMEKITKTPQTSTYSYETSDRCYSAEKSPSEARQDVDLCLVSSCEYKHPKTELS
PSFINPNPLEWFASEEPTEESEKPLTQSGGAPPPPGGKQQGRQCDETPPTSVSESAPSQT
DSDVPPETEECPSITADANIDSEDESETIPTDKTVTYKHMDPPPAPMQDRSPSPRHPDVS
MVDPEALAIEQNLGKALKKDLKEKTKTKKPGTKTKSSSPVKKGDGKSKPSAASPKPGALK
DTSDKVSRVASPKKKESVEKATKTTTTPEVKAVRGEEKDKETKNAANASASKSAKTATAG
PGATKTAKSSAVPPGLPVYLDLCYIPNHSNSKNVDVEFFKRVRSSYYVVSGNDPAAEEPS
RAVLDALLEGKAQWGSNMQVTLIPTHDSEVMREWYQETHEKQQDLNIMVLASSSTVVMQD
ESFPACKIEL
NT seq
7413 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgtggtggtggaagccaccgagtcggagccatccggcagcatcgccaacccg
gcggcgtccacctcgcccagcctgtcgcaccgcttcctcgacagcaagttctacttgctg
gtggtggtcggtgagaccgtgaccgaagagcacctgcggcgtgctatcggcaacatcgag
ctcgggatccgatcatgggacacaaacctgattgaatgcaacttggaccaagaactcaaa
ctttttgtatctcgacactctgcaagattctctcctgaagtcccaggacaaaagatactt
catcaccgaagtgacgttttagaaacagtggtcctgatcaacccttccgatgaagcggtc
agcactgaggtgcgcctgatgatcacggacgccgcccgacacaagctgctcgtgctgacg
gggcagtgcttcgagaacaccggagagctcattctccagtctggctctttctccttccag
aacttcatagagattttcaccgatcaagagattggggagttactgagcaccacccatcct
gccaacaaagccagcttgaccctgttctgtcccgaagagggggactggaagaactccaat
cttgacagacacaatctccaagacttcatcaatatcaaactcaactcagcttctatattg
ccagaaatggaaggactttctgagtttaccgagtacctctcagaatccgtggaagtcccg
tctccctttgacattctggaacctcccacgtcgggtggatttctaaagctctccaagccc
tgctgttacatttttccgggagggaggggtgattctgccctgtttgcagtgaatggattc
aatatgctcatcaatggaggatccgaaagaaaatcctgcttctggaagctcatccgacac
ttggaccgagtggactccatcctgctcacccacattggggacgacaatttgcctggaatc
aacagcatgctgcagcggaagatcgcagagctggaggaagagcagtcccagggctctacc
accaacagtgactggatgaaaaacctcatctcccctgacttaggggttgtatttctcaac
gtccctgaaaatctgaaaaacccagagcctaacatcaagatgaagagaagcatagaagaa
gcttgcttcactctccagtacttaaacaaattgtccatgaaaccagagcctctctttaga
agtgtaggcaataccattgatcctgtcattcttttccaaaaaatgggagtagggaaactt
gagatgtatgtgcttaacccagtcaagagcagcaaggaaatgcagtattttatgcagcaa
tggactggcaccaacaaagacaaagctgaactaatcctgcccaatggtcaagaagtagat
attccaatttcctacttgacttcagtctcgtctttgattgtgtggcatccagcaaaccct
gctgaaaaaatcattcgagttctgtttcctggaaacagcacccagtacaacatcctggaa
gggctagaaaagctcaaacatttagatttcctgaagcagccactggccacccaaaaggat
ctcactggccaggtgcccacccctaccgtgaaacaagtaaaactgaaacagagggctgat
agccgagagagtctgaagccagctgccaagccactggccaccaaatcagtgcgaaaggag
tcaaaagaagaaacccctgaggtcacaaaaactaatcaggtggaaaagccacccaaagtt
gaaagcaaagaaaaggtaatagtgaaaaaagacaagccagtgaaaacagagaccaaacct
cccgtgacagaaaaggaggcacccagcaaagaggagcagcctccgaccaaagccgaggtg
actgagaagcaagccacagacgtcaagcctaagactgccaaagagaagacagtgaaaaaa
gaaatcaaggcaaaacctgaagagaagaaggaagagaaggaaaagcccaagaaggaagtg
gctaaaaaggaggagaaaacacctatcaagaaggaggaaaaacccaaaaaagaagaggta
aaaaaggaagtcaaaaaagaagtcaagaaagaagagaaaaaagaacccaagaaagaggtt
aagaaagaaacaccactcaaggaagccaagaaggaagtgaagaaggatgaaaagaaggaa
attaaaaaggaggaaaaggaacccaaaaaagaaattaagaagctccctaaggactcaaag
aaaccatctactcctctatcggatgtgaaaaaaccagctactttaaaaccaaaagtaccc
aagaaggaagagtcggttaagaaggaggctgttgctgcagggaagccaaaggagaagggg
aaaattaaagtcgttaagaaggaaggcaaaactgcagaggctgcggctgcagctgtcagc
accgtggccaccacggcagccgcagtggcagcggctggaattgcagccactggccctgcc
aaagaactcgaggccgagaggtctctgatgtcatccccagaggatctgaccaaggacttt
gaagagctaaaggctgaggagattgatgtagcaaaggacatcaagcctcagctggaacta
atcgaagacgaagagaaactgaaggaaactgaaccagttgaagcctacgtcatccagaaa
gagacagaagtcatcaaaggttctgcggagtctcctgatgaggggatcaccaccactgaa
ggggagggtgaatgtgagcaaactcctgaagagctggagccagtcgagaaacagggggtg
gatgacattgaaaaatttgaagatgaaggagctggttttgaggagtcctcggagactgga
gactatgaagagaaggcagaaactgaggaggccgaagagccagaagaagacggtgaagaa
aatgtgtgcatgagcacctccaagcacagccccattgaggatgaggaaagtgcaaaggca
gaggcagacgtacacatcaaggagaagagggagtctgtgaccagtggggatgaccgcgca
gaagaagacatggacgaggcagttgagaaaggagaagtggagcaatctgaggaggaggag
gctgaagaggaggacaaagcagaggatgccagagaagaatatgagcctgaaaaaattgaa
gctgaagattatgtgatggccgtggttgacaaggctgcggaggccggtggtgctgaggat
cagtacggattccttaccacatcaaccaagcaaccaggagcccagtctcctggccgagaa
cctgcatcttcaattcacgacgagactctacctggaggctcagagagtgaggccactgcc
tctgatgaggagaatcgagaagaccagcctgaggaattcactgccacctctggctacact
cagtctaccattgagatatctagtgagcccaccccaatggatgagatgtctactcctcgt
gatgtgatgagtgacgagaccaacaatgaagagacagagtccccatctcaggaattcata
aacatcaccaaatacgagtcttcactgtattctcaagaatactccaaaactactgttaca
ccattcaatggattatctgatgggtcaaaaaccgatgccactgagggcaaggattataat
gcttcagcctccaccatatccccaccctcatccatggaggaagacaaattcagcaaatct
gctctacgtgatgcttactactcagaagagaaagaagtgaaaggcagtgccatgctggag
atcagagataccacctccacagtttcagatgagaagcttagcccagccaagagtccatcc
ttgagtccatctccgccatcacccatagagaagacacccctgggtgaacggagtgtgaac
ttctctctgacacccaatgagattaaagtctccacagaagcagaagtggtcccagtgtct
cctgaggtgacccaagaagtagttgaagaacattgtgctagtcctgaggagaagactctg
gaagtggtgtctccatctcagtctgtgactggcagtgctggccacacaccttactaccaa
tctcccactgaagagaaagctagtcacctccctacagaggccactgaaaaaccagcagca
gttccagtgagttttgaattcagtgatgccaaagatgagagtgagagggcttccataagc
cccatggatgaacccgtgcctgactcagagtctcctatggaaaaagttctgtctccttta
cgcagccctcccctgattggatccgagtctgcatatgaaagttttctaagtgctgacgtc
aaggctcctggcagatgcaccgaaagcccctttgaaggaaagaatggaaaacaagacatt
gcaaaccaaataagtccagtttctgaaatgacttccactggtctttaccaagacaaacag
gaagtaaaaagtacagactttacaccaatcaaggaagactttgttccagaaaagaaaact
gatgatgtcgaagccatgagttctcaaccagcactggctttggatgaaaggaaattggga
ggagatgtctctccgacacaaatagatgtcagtcagtttggatcttttaaagaagatacc
aagatgtcaatttctgaaggcacagtctcagacaagtcagccactcctgttgatgagggt
gtagctgaagacacatactctcacatggaaggtgtggcctcagtctccactgcctctgtg
gctacgagttcatttccggaaccaacaacagatgatgtgtctccttctctgcatgccgaa
gttggctccccacattccacagaagtagatgactccctttcagtgtctgttgtgcaaaca
cctaccactttccaggagacagaaatgtctccatctaaagaagaatgcccaagaccaatg
tcaatttctcctccagatttctcccctaagacggccaaatccaggacaccagttcaagat
caccgatctgaacagtcctcaatgtctattgaatttggccaagaatctcctgagcactcc
cttgctatggactttagtcgacagtctccagatcaccctgctgtgggtgcaagtatgctc
cacatcactgaaaatgggccaactgaagtggactatagtccttccgacttgcaggactcc
agtttatcacataagataccaccaacggaggagccatcctacacccaagataatgatctc
tccgagctcatctctgtgtctcaggtggaggcctccccatccacctcttctgctcatacc
ccatctcagatagcttctcctcttcaagaagaaactctatctgatgttgctcctcccagg
gagatgtccttatatgcctcactcacctctgagaaagaacaaagtctggaaggagagaag
ctctctccaaaatctgatatctctccactcaccccacgagagtcctctcctttgtattca
cctggtttttcagattctacctctgcagtcaaagagaacgcagcagcttgccatacctcc
tcatctccaccaatagatgcagcatctgcagagccctatggcttccgtgcctcaatgtta
ttcgatacaatgcaacatcatctagccttgaatagagatttgaccacatctggcatggag
aaggacaatggaggaaagacacctggtgactttagctatgtctatcaaaagtctgagaaa
accaccaggtccccagatgaagaagattatgactatgaatcttgtgagaaaaccaccagg
accccagatgtgggcagctattactatgagaagacggagagaaccgtaaaatccccatgc
gatggcggctactcctatgagaccattgagaagaccaccaagacccctgaagatggtggc
tatgcctgtgaaattactgagaagaccacacggacccctgaagagggcgggtactcttac
gagataagtgagaagaccatgaggacccctgaagtgagtggttacagctatgaaaagacc
gagagggctcgacggctcctggatgacatcagcaatggctatgacgactctgaggatggt
ggccacacacttggggatgccagctactcttatgagaccactgagaagattaccagcttc
cctgaatctgaaagttactcctatgagacgtctacaaaaacgaccagaagccctgatact
tccacgtactgttatgagacaatggagaaaattactaaaaccccccagacatctacctat
tcctatgagacttcagaccgatgctactctgcggagaagtccccctcggaggcccgccag
gatgttgatttatgcctcgtgtcctcctgtgagtacaagcatcccaagacagagctttca
ccctccttcattaatcccaaccctctggagtggtttgccagcgaagagcccactgaagaa
tctgagaagcccctcactcagtcagggggagccccaccaccaccaggaggaaagcagcag
gggcgacagtgtgatgagaccccgcctacctcagtcagtgagtcagccccatcccagacc
gactctgatgtgcccccagagacggaagagtgcccctccatcacagccgatgcaaacatc
gactctgaagatgaatcagaaaccatccccacagacaaaactgtcacatacaaacacatg
gacccacctccggcccccatgcaggaccgaagcccttctccacgccaccctgacgtgtcc
atggtcgacccagaggccttggccattgagcagaacctgggcaaagctctgaagaaggac
ctgaaagagaagaccaagaccaagaagccagggacaaagaccaagtcttcttcacctgtc
aaaaagggggacgggaagtccaagccctcagcagcttcaccgaaaccaggggccttgaaa
gatacctcagataaggtgtccagagtggcttctcctaagaagaaagaatctgtggaaaaa
gcaacaaaaaccacgaccactcctgaggtcaaagctgtgcgtggggaagagaaggacaag
gagaccaagaatgctgccaatgcttctgcatccaaatcagcaaagaccgccaccgcagga
ccaggagccaccaagacagccaagtcctcagctgtgcctccaggtctcccggtgtacttg
gacctgtgctatattcccaaccacagcaacagtaagaatgttgatgttgaatttttcaag
agagtgaggtcgtcctactatgtggtgagtgggaatgaccctgctgctgaggagcccagc
cgggctgtcctggatgccttgttggaagggaaggctcagtggggcagcaacatgcaggta
actctgatcccaacgcatgactcggaagtgatgagggaatggtaccaggagacccatgag
aagcagcaagacctcaacatcatggttttagcaagcagcagcacggtggttatgcaagat
gaatctttccctgcatgcaagatagaactgtaa
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integrated database retrieval system
