Sciurus carolinensis (gray squirrel): 124986554
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Entry
124986554 CDS
T08117
Name
(RefSeq) core histone macro-H2A.1 isoform X1
KO
K11251
histone H2A
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar03082
ATP-dependent chromatin remodeling
ncar04217
Necroptosis
ncar04613
Neutrophil extracellular trap formation
ncar05034
Alcoholism
ncar05322
Systemic lupus erythematosus
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
124986554
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
124986554
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
124986554
09160 Human Diseases
09163 Immune disease
05322 Systemic lupus erythematosus
124986554
09165 Substance dependence
05034 Alcoholism
124986554
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ncar03036
]
124986554
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ncar04147
]
124986554
Chromosome and associated proteins [BR:
ncar03036
]
Eukaryotic type
Nucleosome assembly factors
Histones
124986554
Exosome [BR:
ncar04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
124986554
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Macro
Histone_H2A_C
Histone
CBFD_NFYB_HMF
DUF1764
Clp_N
Motif
Other DBs
NCBI-GeneID:
124986554
NCBI-ProteinID:
XP_047410911
LinkDB
All DBs
Position
6:128848104..128914189
Genome browser
AA seq
372 aa
AA seq
DB search
MSSRGGKKKSTKTSRSAKAGVIFPVGRMLRYIKKGHPKYRIGVGAPVYMAAVLEYLTAEI
LELAGNAARDNKKGRVTPRHILLAVANDEELNQLLKGVTIASGGVLPNIHPELLAKKRGS
KGKLEAIITPPPAKKAKSPSQKKPVSKKAGGKKGARKSKKKQGEVSKAASADSTTEGTPA
DGFTVLSTKSLFLGQKLNLIHSEISNLAGFEVEAIINPTNADIDLKDDLGNTLEKKGGKE
FVEAVLELRKKNGPLEVAGAAVSAGHGLPAKFVIHCNSPVWGADKCEELLEKTVKNCLAL
ADDKKLKSIAFPSIGSGRNGFPKQTAAQLILKAISSYFVSTMSSSIKTVYFVLFDSESIG
IYVQEMAKLDAN
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagccgtggtgggaagaagaagtccaccaagacctccaggtccgccaaggcaggt
gtcatcttcccagtggggcggatgctgcggtacatcaagaaaggccaccccaagtacagg
attggagtgggggcacctgtgtacatggctgctgtcctggaatacctgacagcggagatc
ctggagctggctggcaatgcagcaagagacaacaagaagggacgggtcacaccccggcac
atcctgctggctgtggccaatgatgaagagctaaatcagctgctaaaaggagtcaccata
gccagtgggggggtgttaccaaacatccaccctgagttgctagcgaagaagcgaggatcc
aaaggaaagttggaagccatcatcaccccacccccagccaaaaaggccaagtctccatcc
cagaagaagcctgtgtccaagaaggcaggaggcaagaaaggggcccggaaatccaagaag
aagcagggagaagtcagcaaggcagccagcgccgacagcacgacagagggcacgccggcc
gacggcttcaccgtcctctccaccaagagcctcttccttggccagaagctgaaccttatt
cacagtgaaatcagtaatttagccggctttgaggtggaggccataatcaatcctaccaat
gctgacattgaccttaaagatgacctaggaaatacgctggagaagaagggtggcaaggag
tttgtggaagctgttctggaacttcggaaaaagaatgggcccttggaagtagctggagcc
gctgtcagtgcaggccatggcctgcctgccaagtttgtgatccactgtaatagtccagtc
tggggtgcagacaagtgtgaagaacttctggaaaagacggtgaaaaactgcttggccctg
gctgatgataagaagctgaaatctattgcatttccatccattggcagtggcaggaatggg
tttccaaagcagacagcagcccagctgattctgaaggccatctccagttacttcgtgtcc
accatgtcctcctccatcaaaacggtgtactttgtgcttttcgacagtgagagtataggc
atctacgtgcaggaaatggccaagctggatgccaactag
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integrated database retrieval system
