Sciurus carolinensis (gray squirrel): 124986569
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Entry
124986569 CDS
T08117
Name
(RefSeq) histidine--tRNA ligase, cytoplasmic isoform X1
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
124986569
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ncar01007
]
124986569
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ncar03016
]
124986569
Enzymes [BR:
ncar01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
124986569
Amino acid related enzymes [BR:
ncar01007
]
Aminoacyl-tRNA synthetase
Class II (A)
124986569
Transfer RNA biogenesis [BR:
ncar03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
124986569
Prokaryotic type
124986569
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
HGTP_anticodon
HGTP_anticodon2
WHEP-TRS
tRNA-synt_2
Sugarporin_N
tRNA-synt_2d
HHH_3
Motif
Other DBs
NCBI-GeneID:
124986569
NCBI-ProteinID:
XP_047410946
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Position
6:complement(98901468..98915734)
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AA seq
509 aa
AA seq
DB search
MAERAALEELVRLQGERVRGLKQQKASTEQIEEEVAKLLKLKAQLGPDESKQKFVLKTPK
GTRDYSPRQMAVREKVFDVIIRCFKRHGAEVIDTPVFELKETLTGKYGEDSKLIYDLKDQ
GGELLSLRYDLTVPFARYLAMNKLTNIKRYHIAKVYRRDNPAMTRGRYREFYQCDFDIAG
QFDPMIPDAECLKIMCEILSSLQIGDFLVKVNDRRILDGMFAICGVPDSKFRTICSSVDK
LDKVSWEEVKNEMVGEKGLAPEVADHIGDYVQQHGGVSLVEQLLQDPKLSQSKQALEGLG
DLKLLFEYLTLFGIADKISFDLSLARGLDYYTGVIYEAVLLQTPTGAGEEPLGVGSVAAG
GRYDGLVGMFDPKGRRVPCVGLSIGVERIFSIVEQRLEALEEKVRTTETQVLVASAQKKL
LEERLKLVSELWDAGIKAELLYKKNPKLLNQLQYCEEAGIPLVAIIGEQELKEGVIKLRS
VASREEVDVRREDLVEEIRRRTSQPLCIC
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atggccgagcgagctgcgctggaggagctggtgcgacttcagggagagcgcgtgcggggt
ctcaagcagcagaaggccagcaccgagcagatcgaagaggaggtggcaaaactactaaaa
ctgaaggcacagctgggtcctgatgaaagcaaacagaaatttgtgctcaaaacccccaag
ggcacaagagactacagtccccggcagatggcagttcgggagaaggtatttgatgtaatc
attcgctgcttcaaacgccatggtgcagaagtaattgatacacctgtgtttgaactaaag
gaaacactaacaggaaaatatggagaagactctaagcttatctatgacctgaaggaccag
ggtggggagctattgtcccttcgttatgatctcactgttccttttgctcggtatttggca
atgaataaactgacaaatattaaacgctatcacatagctaaggtataccggcgggataac
ccagccatgacccgaggccgatatcgagaattctaccagtgtgattttgacattgctggg
caatttgatcccatgatccctgatgcagagtgcctgaagatcatgtgtgagatcctgagt
tcacttcagataggcgacttcctggtcaaggttaatgatcggcgcatcctcgatgggatg
tttgccatctgtggtgttcctgatagcaagttccgtaccatctgctcctcggtagacaag
ctggacaaggtatcctgggaggaagtgaagaatgagatggtaggagagaagggccttgca
ccggaagtagctgaccacattggggactacgtccaacaacacggtggggtgtctctggtg
gagcagctgctccaggatcctaaactatcccagagcaagcaggccttggaaggtctagga
gacctgaagctgttgtttgagtacttaactctgtttggcattgctgacaagatctccttt
gacctgagccttgctcgagggctggactactatactggggtaatctatgaggcagtgttg
ctacaaaccccaaccggagcaggggaagagcctctaggtgtgggcagtgtagctgctgga
gggcgctacgatgggctagtgggcatgtttgaccctaaaggacgcagagtgccatgtgtg
gggctcagcattggagtagaacggatcttctccatcgtggagcagagactagaggcttta
gaggagaaggtccggaccacagagacacaggtgcttgtggcatctgcacagaagaaacta
ctggaggagagactgaagcttgtctcagagctgtgggatgctgggatcaaggctgagctg
ctctacaagaagaacccaaagttactaaatcagttgcagtactgtgaggaagcaggcatc
ccactggtggccatcatcggggagcaggagctcaaggaaggggttatcaagctccgttca
gtggctagcagagaagaggtggatgtcagaagagaagaccttgtggaagagatcaggagg
agaacaagccagcccctttgcatctgctga
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