Sciurus carolinensis (gray squirrel): 124986571
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Entry
124986571 CDS
T08117
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1-like isoform X1
KO
K20092
chromodomain-helicase-DNA-binding protein 1-like [EC:5.6.2.-]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ncar03036
]
124986571
Chromosome and associated proteins [BR:
ncar03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
124986571
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
DEAD
SWI2_SNF2
AAA_22
ERCC3_RAD25_C
Torsin
AAA_34
Motif
Other DBs
NCBI-GeneID:
124986571
NCBI-ProteinID:
XP_047410953
LinkDB
All DBs
Position
1:complement(100845690..100907492)
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AA seq
892 aa
AA seq
DB search
MEGEVPGFLLALQAKGRPEAVRTRVEEQDLRQCGLTGIHLRPYQLEGVNWLAQRFHCQNG
CILGDEMGLGKTCQTIALIIYLTGRLNDEGPFLILCPLSVLNNWKEEMERFAPGLSCVTY
AGDKEERIHLQQDLKQESHFHVLLTTYEICLKDAPFLKSFTWSILVVDEAHRLKNQSSLL
HKTLSEFSVVFSLLLTGTPIQNSLQELYSLLSFVEPELFSKEQMEDFVHRYQDIEKESKS
ASELHNLLQPFLLRRVKAEVATELPKKTEVVIYHGMSALQKKYYKAILMKDLDAFENEMA
KKVKLQNILSQLRKCVDHPYLFDGVEPEPFEVGDHLIEASGKLHLLDKLLDFLHSRGHRV
LLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNFGQQPIFIFLLSTRAGGI
GMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKAVKVIRLIGRDTVEEIVYRKAASK
LQLTNMIIEGGHFTLGAQKPLTDADLQLSEILKFGLDKLLSSEGSTMDEIDLESILGETK
NGQWVSDALPAAGGGSRELEEGKNHMYLFEGKDYSKEPSKEDRKSFEQLVNLQKILLEKK
SQEGRLLRNKGSVLIPGLLEGSTKRKRILSPEELEERQKKRQAAAAKRKRLIEEKKREKE
EAEHKKKMAWWESHNYQSFCLSSEESESEDLEDGEDESAPELGYDDPDPNSIKYVSGDVT
HPQAGTEDALIVHCVDDSGRWGRGGLFTALEARSAEPRKVYELAGKMKDLSLGSVLLFPI
DDKESRNTGQDLLALVVAQHRDRSNALSGIKMAALEEGLKKIFLAAKRKKASVHLPRIGH
ATKGFNWYGTERLIRKHLAARGIPTYIYYFPRSKAAVLHSQSPLSSSAQVVP
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atggagggcgaagtgcccggcttcctactagccctacaggcgaagggcagacccgaggcg
gtgcggacgcgggtggaggagcaggacttacgccagtgcggcctaacgggaattcatcta
cgcccttatcaactggagggagtcaactggctggcccaacgcttccactgtcagaatggc
tgcatcctgggagatgagatgggcctcggtaagacctgccagactattgctctcatcatt
tacttgacaggaaggttaaatgatgaaggaccatttctgattctctgtcccctgtctgtt
ttgaacaactggaaagaagagatggaaagatttgctccaggtctttcctgtgtaacatat
gcaggggacaaggaggaaagaatacatcttcagcaagacctgaagcaggagtcacatttt
catgtgctactgactacctatgagatttgcttaaaagatgcaccatttctaaaatccttc
acatggagtattcttgttgtggatgaagctcacagattgaaaaaccaaagctctctgctg
cataagacactttcagagttctcagtggtcttcagtctcctgttgactggaactcctatc
caaaacagcctccaagaactctactctctcctcagttttgtggaacctgaacttttttcc
aaggaacagatggaagattttgttcaccgttaccaggatattgaaaaagagtccaaatca
gcaagtgaactacacaacctcttgcagccatttctgctaaggagagtaaaagctgaggta
gctacagagcttcccaagaagacagaagtagtgatataccacggcatgtcagcattgcag
aaaaaatactacaaggctattttgatgaaagacctagatgcttttgaaaatgagatggca
aagaaagttaaacttcagaatatcttatcccagcttcgaaagtgtgtggatcacccatat
ttgtttgatggtgtagagccagagccttttgaagttggagaccacctgattgaggctagt
gggaaacttcacctgctggataagctgctggacttcctgcattccaggggccatcgggtt
ttacttttctcccaaatgacccagatgttggatattctccaagactatatggattacaga
ggctacagctatgagcgtgtggatggttctgtgagaggagaagagagacatctggctata
aagaactttggacagcagcccatttttatttttctcctgagtaccagggcaggtggaatt
ggcatgaacttaacagcagcagatactgttatttttgttgacagtgattttaatcctcaa
aatgacttacaagcagctgccagagctcaccgaattggccagaacaaggctgtgaaagtt
attcggctgattggccgagatactgtggaagaaatagtttataggaaagcagcctccaaa
ctgcagctcaccaacatgatcatagaaggaggccattttactcttggagcccagaaacct
ttgactgatgctgacctccagttgagtgaaatactcaaatttggcttggataaactgctg
tcttctgaggggagcaccatggatgagatagacctggagtccatcctgggagagacaaaa
aatggccagtgggtctctgatgccttgcctgcagccggaggagggagcagagaactggag
gagggaaagaaccatatgtacttatttgaaggtaaagattattctaaagagcccagtaag
gaagacagaaaatcctttgaacaactggtgaatcttcagaaaatccttttggaaaaaaaa
agtcaagagggccggttactccgaaataaaggcagtgttcttatcccaggcctcttggag
gggtctaccaaaaggaaaaggattctgagtccagaagaactggaggaaagacagaaaaaa
agacaagcagcagcagccaagagaaagagactaatagaggaaaagaagagggaaaaggaa
gaagctgagcataagaaaaagatggcttggtgggagtcccacaattaccagtccttctgc
ttgtcctctgaggagagtgagtccgaggaccttgaggacggggaagatgagagtgctcct
gaattgggttacgatgacccagacccaaactccatcaagtatgttagtggtgatgtcacg
caccctcaggctgggacagaggatgctctcatcgtgcactgtgtagatgactctggccgc
tggggcagaggtggcttattcaccgctctggaagcacggtcagctgagccaagaaaagta
tatgagctggcagggaaaatgaaagacttaagtttgggaagtgtccttttgtttcctatt
gatgataaagagtcaagaaacacagggcaagatctgttggccttggtagtggctcagcac
cgtgatcgctccaatgccctgtctggcattaagatggcagctctagaagagggcctcaag
aagatatttttagcagcaaagagaaagaaagcaagtgttcatcttccacgcatcggtcat
gccaccaagggttttaactggtatggtactgagcgacttattcggaaacatttggctgca
agaggcatcccaacttacatatattacttccctagaagcaaggctgctgtccttcattca
cagtccccactttcctcctcagcacaggtggtgccttaa
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