Sciurus carolinensis (gray squirrel): 124986574
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Entry
124986574 CDS
T08117
Name
(RefSeq) zinc finger matrin-type protein 2
KO
K12848
U4/U6.U5 tri-snRNP component SNU23
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124986574
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ncar03041
]
124986574
Spliceosome [BR:
ncar03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
124986574
Complex C
U4/U6.U5 tri-SnRNP related factors
124986574
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-met
zf-C2H2_jaz
zf-U1
SNRNP27
Cgr1
C2H2-zf_KIN17
DUF6277
DUF4250
Herpes_gp350_A
MG280
zf-C2H2
Motif
Other DBs
NCBI-GeneID:
124986574
NCBI-ProteinID:
XP_047410954
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Position
6:98923422..98930205
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AA seq
199 aa
AA seq
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MASGSGTKNLDFRRKWDKDEYEKLAEKRLTEEREKKDGKPVQPVKRELLRHRDYKVDLES
KLGKTIVITKTTPQSEMGGYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERSTLD
QVKKRFEVNKKKMEEKQKDYDFEERMKELREEEEKAKAYKKEKQKEKKRRAEEDLTFEED
DEMAAVMGFSGFGSTKKSY
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgggcagcgggacaaaaaacttggactttcgccgaaagtgggacaaagatgaa
tacgagaagctcgccgagaagaggctcacggaagagagagaaaagaaggatggaaaacca
gtgcagccagtcaagagggaacttctgcggcacagggactacaaagtggacttggaatct
aagcttgggaagacaattgtcattaccaagaccaccccacagtctgagatgggaggatat
tactgcaatgtctgcgactgtgtggtaaaagactctatcaacttcctggatcacattaat
ggaaagaaacatcagcgaaacctgggtatgtctatgcgtgtggaacgttccaccctggat
caggtgaagaaacgttttgaagtcaacaagaagaagatggaagagaagcagaaagattat
gattttgaggaaaggatgaaggagctcagagaagaggaggaaaaggctaaagcatataag
aaagagaaacagaaggagaagaagaggagggccgaggaagacttgacatttgaagaggat
gatgagatggcagctgtgatgggcttctctggctttggttccaccaagaagagttactga
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