Sciurus carolinensis (gray squirrel): 124986619
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Entry
124986619 CDS
T08117
Name
(RefSeq) E3 ubiquitin-protein ligase MARCHF6 isoform X1
KO
K10661
E3 ubiquitin-protein ligase MARCH6 [EC:
2.3.2.27
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
124986619
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncar04121
]
124986619
Enzymes [BR:
ncar01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124986619
Ubiquitin system [BR:
ncar04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
March proteins
124986619
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MARCHF6_C
RINGv
Motif
Other DBs
NCBI-GeneID:
124986619
NCBI-ProteinID:
XP_047411049
LinkDB
All DBs
Position
6:8463048..8535941
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AA seq
915 aa
AA seq
DB search
MDTAEEDICRVCRSEGTPEKPLYHPCVCTGSIKFIHQECLVQWLKHSRKEYCELCKHRFA
FTPIYSPDMPSRLPIQDIFAGLVTSIGTAIRYWFHYTLVAFAWLGVVPLTACRIYKCLFT
GSVSSLLTLPLDMLSTENLLADCLQGCFVVTCTLCAFISLVWLREQIVHGGAPIWLEHAA
PPFNAAGHHQNEAPAGGNGAENVAPEQPANPPAENAVVGENPDAQDDQAEEEEEDNEEED
DAGVEDAADANNGAQDDMNWNALEWDRAAEELTWERMLGLDGSLVFLEHVFWVVSLNTLF
ILVFAFCPYHIGHFSLVGLGFEEHVQASHFEGLITTIVGYILLAITLIICHGLATLVKFH
RSRRLLGVCYIVVKVSLLVVVEIGVFPLICGWWLDICSLEMFDATLKDRELSFQSAPGTT
MFLHWLVGMVYVFYFASFILLLREVLRPGVLWFLRNLNDPDFNPVQEMIHLPIYRHLRRF
ILSVIVFGSIVLLMLWLPIRIIKSLLPNFLPYNVMLYSDAPVSELSLELLLLQVVLPALL
EQGHTRQWLKGLVRAWTVTAGYLLDLHSYLLGDQEENENSANQQVNNNQHARNNNAIPVV
GEGLHAAHQAILQQGGPVGFQPYRRPLNFPLRIFLLIVFMCITLLIASLICLTLPAFLFS
VFAGRWLMSFWTGTAKIHELYTAACGLYVCWLTIRAVTVLVAWMPQGRRVIFQKVKEWSL
MIMKTLIVAVLLAGVVPLLLGLLFELVIVAPLRVPLDQTPLFYPWQDWALGVLHAKIIAA
ITLMGPQWWLKTVIEQVYANGIRNIDLHYIIRKLAAPVISVLLLSLCVPYVIASGVVPLL
GVTAEMQNLVHRRIYPFLLMVVVLMGILSFQVRQFKRLYEHIKNDKYLVGQRLVNYERKS
GKQGTSAPPPQSSQE
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atggacaccgccgaggaagacatatgtagagtgtgtcggtcagaaggaacacctgaaaaa
cctctttatcatccttgtgtatgtactggcagtattaaatttatccatcaagaatgctta
gttcagtggctgaaacacagtcgaaaagaatactgtgaattatgcaaacacagatttgct
tttacaccaatttattccccagatatgccttcacggcttccaatccaagatatatttgct
ggactggttacaagtattggcactgcaatacgatattggtttcattatacacttgtggcc
tttgcatggttgggagttgttcctcttacagcatgccgcatctacaagtgcttgtttact
ggctccgtgagctcactactgacactgccgctagacatgctgtcaacggaaaatttgttg
gcggattgtttgcagggttgttttgtggtgacatgcacattgtgtgcattcatcagcctg
gtgtggttgcgagagcagatagtccacgggggagcaccgatttggttggaacacgctgct
ccgcccttcaatgctgctgggcatcaccaaaatgaggctccagcaggaggaaacggtgca
gaaaatgttgctcctgaacaacctgctaaccccccagctgagaatgcagtggtgggagaa
aaccctgacgcgcaggatgatcaggcggaagaggaggaggaagataacgaggaggaagat
gatgcaggcgtggaagatgcagcagatgccaataatggagcccaggatgacatgaactgg
aatgctttagaatgggaccgagctgcagaagaactcacgtgggaaagaatgctaggactt
gatggatcactagtttttctggaacatgtcttctgggtggtgtctttaaatacactgttc
attcttgtgtttgcattttgcccttaccacattggtcatttctcccttgttggtttggga
tttgaagaacatgtccaagcatctcattttgaaggcctaatcacaaccatagttgggtat
atacttttagcaataacattgataatttgccatggcttggcaactcttgttaaatttcat
aggtctcgtcgcttactaggagtctgctacattgttgttaaggtctctttgttagtggtg
gtagagattggagtgttccctctcatttgtggctggtggctggatatctgttccctggaa
atgtttgacgctactctgaaagatcgagaactaagctttcagtcggctccaggtactacc
atgtttctacattggctagtaggaatggtgtatgtgttctactttgcctccttcattcta
ttactgagagaggtacttcgacctggtgtcttatggtttctaaggaatttgaatgatcca
gattttaatccagtgcaggaaatgatccacttgcccatttataggcatctccgaagattt
attttgtcagtgattgtctttggctccattgtcctcctgatgctttggcttcctatacgt
ataattaagagtctattgcctaattttcttccctacaatgtcatgctgtacagtgatgct
ccagtaagcgaactgtcccttgagctgcttctgcttcaggttgtcttgccagcgttactc
gaacagggacacacaaggcagtggctgaaggggcttgtgcgagcgtggactgtcactgca
ggatacttgctggatcttcattcctatctgttgggagaccaggaagaaaatgagaatagt
gcaaatcaacaagtcaacaataaccagcatgctcgaaataacaacgctattcctgtggtg
ggggaaggcctgcatgcagcccaccaagccatacttcagcagggaggccctgtcggcttt
cagccttaccgccggcctttaaattttccactcaggatatttctgttgattgtcttcatg
tgtatcacattattgattgccagcctcatctgccttactttaccagcctttttattttca
gtattcgctggtcgttggttaatgtccttttggacgggaactgccaaaatccatgagctc
tacacagctgcttgtggtctgtatgtttgctggctaaccataagggcagtgacagtgctg
gtggcatggatgcctcagggacgaagagtgatcttccagaaggttaaagagtggtctctt
atgataatgaagactttgatagttgctgtgctgctggctggggttgtcccactccttttg
gggctcctgtttgagctggttattgttgctcccttgagggttcctttggatcagactcct
cttttttatccatggcaggactgggcacttggagtcctgcatgccaaaatcattgccgct
attacattgatgggtcctcagtggtggttgaaaactgtaattgaacaggtttatgcaaat
ggcatccggaacattgaccttcactacattattcgtaaactggcagctccagtgatctct
gtgctcttgctttccttgtgtgtaccttatgtcatagcttctggcgtggttcccttacta
ggtgttactgcagaaatgcaaaacttagtccaccggcggatttatccatttttactgatg
gttgtggtattgatgggaatcttgtccttccaggttcgccaatttaagcgcctttatgag
catattaaaaacgacaagtaccttgtgggtcaacgcctggtgaactatgagcggaaatct
ggcaagcaagggacatctgcgccacctccacagtcgtcccaagaataa
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