Sciurus carolinensis (gray squirrel): 124986692
Help
Entry
124986692 CDS
T08117
Name
(RefSeq) zinc finger FYVE domain-containing protein 16-like isoform X1
KO
K04679
MAD, mothers against decapentaplegic interacting protein
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04144
Endocytosis
ncar04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
124986692
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124986692
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ncar01009
]
124986692
Protein phosphatases and associated proteins [BR:
ncar01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
124986692
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SARA_C
FYVE
Motif
Other DBs
NCBI-GeneID:
124986692
NCBI-ProteinID:
XP_047411235
LinkDB
All DBs
Position
6:65983207..66029271
Genome browser
AA seq
1544 aa
AA seq
DB search
MDSYFKAAISDLDKLLDDFEQNPDEQDYLQDAKNAYDSNRCSVSSELASSQLTSLLPKDQ
HCISNCVSSETCHEANEISLNGKTLEGLTSMQNEKNVTGLDLLSSVDGSTSDEIQPLYMR
RCSKPVCDLISDMGNLVHATNSEEDIRKLLPDDYKSSAHSLTELDSSSVSDTLCVSSTDH
ACDTVSEVQNDVNSELQNREIGETKELGIKVDTVLSDSCNYSETENLKDKKISSQLEPIV
DFNMSSVLTQQSSKMFDAKDNVQHSSLPCELLKDDDCLVKEELDMEVITATECLEETGST
SGLPCKSLPKNEGLCLNDSNLKDENFKLPDFSFQEDRTAVFIKQCTKVDSRNLDLKDNSD
IIQDSSSALHTSREGVHSSLSCLPLSGSLCGSLIDNKAHGDFLPQNEPKDHLQDSVTVHE
EMQKNVALDGEPFRVTDLLKKEKCKTILLQPVNEKREDGKVESEQMVIRVESLDYPDDTS
SSIAAESQVELYGANAPEYPDCCEGFAFSSSDMDGQDLDYFNIDEGMKSGALISDAELDA
FLTEQYLQTTNIKSFEENVNDLKSQMNQIDVKGLDDGSANDMYFNAEAGTAGKSDGINMI
CEAVEKQNTRENDVFSIGEKGRIPIEQELPISKTEVMNELPVSDTNSQSVHVGGARPKQL
LNLPSRTRSSRQLNKLDVPSMPESEPSIANTIAPNTCTTDSITDPQVNFNSNYIDIESNF
EGRSSFIAANEDSLPENTCKEGLVLGQKQPTWVPDSEAPNCMNCQVKFTFTKRRHHCRAC
GKVFCGVCCNRKCKLQYLEKEARVCIICYETINKAQAFERMMSPTASNLKSNHSDGCAII
QPLQETQTSSIPSPTTLPISALKQPSVEGLCSKEQKRVWFADGILPNGEVADTTKLSSGS
KRFSEDFSPLLPDVPMNVNPVDHTHSTTVEKTNNEIGDVTRKEIIQSPIFHVPSVEKQSI
NTGTEGIPTSGSLALVDDVFAEIEEPPAPTGDMVNSNLPVPSISDYRLLCGIDKYVCNKI
SLLPNDEDSLPPLLATSGEKGSVEEHPSHEQIILLLEGEGFHPVTFVLNANLLVNVKLVF
YSSDKYWYFSTNGLHGLGQAEIIILLLCLPNEDTIPKDIFRLFITIYKDALKGKYIENLD
SITFTESFLNSKDHGGFLFITPTFQKLDDLPLPSNPFLFGILIQKLEIPWAKVFPMRLML
RLGAEYKAYPTPLTSIRGRKPLFGEIGHTIMNLLVDLRNYQYTLHNIDQLLIHMEMGKSC
IKIPRKKYSDVMKVINSSNEHVISIGASFSTEADSHLVCVQNDGVYQTQANSATGHSRKV
TGASFVVFNGALKTSSGFLAKSSIVEDGLMVQITPETMDGLRLALREQKDFKITCGKVDA
VDLREYVDICWVDSEEKGNKGVISSVDGISLQGFPSEKIKLEADFETDEKIVKCTEVFYF
LKDQDLSILSTCYQFAKEIAMACSAALCPHLKTLKSNRMNKIGLRVSIDTDMVEFQAGSE
GHLLPQHYLNDLDSALIPVIHGGTSNSSLPLEIELVFFIIENLF
NT seq
4635 nt
NT seq
+upstream
nt +downstream
nt
atggacagctattttaaagcagccatcagtgacttggacaaactccttgatgattttgaa
cagaacccagatgaacaagattatctccaagatgcaaaaaatgcatatgattctaaccgc
tgttcagtttcttcagagttggcttcttcacagctaacttcgctgctgccaaaggaccaa
cattgcattagtaattgtgtctcgtcagaaacatgccatgaagcaaatgagatttctttg
aacggaaaaactcttgagggactaacttctatgcaaaatgaaaaaaatgtaacaggactt
gatcttctttcttctgtggatggtagtacttcagatgaaatccagcctttatacatgaga
cgatgtagtaaacctgtctgtgacttaataagtgatatgggtaacttagttcatgcaact
aatagtgaagaagatattagaaaattattgccagatgattataagtctagtgcacattct
ttgactgaattggattcatcttcagtttcagatactctgtgtgtttcctcaacagaccat
gcttgtgatactgtcagcgaagttcagaatgatgtcaactctgaattacaaaatagagaa
attggtgaaaccaaagaattgggtataaaagtagatacagtactttcagattcttgtaac
tacagtgaaacagaaaatttgaaggataaaaagatctctagtcagttagaaccaattgtt
gattttaacatgtcatctgttttgacacaacaaagttccaaaatgtttgatgccaaagat
aacgtgcaacacagtagtctgccatgtgaattattaaaagatgatgactgtttagtaaaa
gaggagttagatatggaagtcataactgccacagaatgtttagaagaaacaggtagtacc
agtggtttgccttgcaaaagtcttccgaaaaatgaaggtttatgcttaaatgactcaaat
ttaaaagatgaaaatttcaaattacctgacttttcctttcaagaagatagaactgctgtg
tttataaaacaatgtacaaaagtcgactcaagaaacttagaccttaaagataatagtgat
ataatccaagattcctcttcagctttacatacttcaagagaaggtgtacattcttcatta
tcctgtcttccattatctgggtctttgtgtggatcattaattgacaataaagcacatggt
gattttttacctcagaatgaacctaaagaccatttacaagattcagtgactgtgcatgaa
gaaatgcagaagaatgttgctctagatggggaaccattcagggtgactgatctcttgaaa
aaggaaaaatgtaaaaccatacttcttcagccagtaaatgaaaaaagggaggatggaaag
gtagaatctgagcagatggtgatcagagtagaatctttggattaccctgatgacaccagt
tcttctatagctgcagaatctcaagtggagctttatggtgccaatgccccagagtatcct
gattgttgcgaaggttttgctttttcaagcagtgatatggatgggcaagatttagattac
tttaatattgatgaaggcatgaaaagtggtgcactaattagtgatgctgaacttgatgcc
tttctgacagaacagtatcttcagaccactaacataaaatcttttgaagaaaatgtaaat
gacttgaaatctcaaatgaatcagatagatgtaaaaggcttagatgatggaagtgccaat
gacatgtattttaatgctgaagcaggaactgctggaaaaagtgatggtattaacatgata
tgtgaagcagttgaaaaacaaaatacaagagaaaatgatgtcttttctataggggaaaaa
ggcagaattccaattgaacaagagttacctatcagtaagactgaggtgatgaatgaatta
ccagtctctgatactaacagtcagtctgttcatgttgggggagctagacctaagcaattg
cttaaccttccatcaagaaccaggagttcaaggcaactgaacaagctagatgttccaagt
atgccagaaagtgaacctagcatagcaaataccattgctccaaatacttgtactacagat
tctataactgatcctcaggttaatttcaactctaattatattgatatagaaagtaatttt
gaaggtagatctagttttatagctgcaaatgaagattctctacctgaaaacacttgcaaa
gaaggcttagttttgggccagaaacaacccacttgggttcctgattcagaagctccaaac
tgtatgaactgccaagtcaaatttacttttacaaaacggcgacatcactgcagagcatgt
gggaaagtattttgcggtgtctgttgtaataggaaatgtaaactgcagtatctagaaaag
gaagcaagagtgtgtataatctgctatgagactattaataaagctcaggcctttgaaagg
atgatgagtccaactgcttctaatcttaaatctaatcattctgatggatgtgccatcatc
cagcctcttcaggagacccaaacatctagcataccttcacctacaactttgccaatctca
gcacttaaacaaccaagtgttgaaggactgtgctccaaagaacagaaaagagtatggttt
gcagatggcattttgcctaatggtgaagttgcagatacaacaaaattatcatcaggaagt
aaaagattttctgaagactttagtcctctcttacctgatgtgcctatgaatgtaaaccca
gtggatcatacccattctactacagtggaaaaaacaaacaatgagataggcgatgttaca
agaaaagagataattcagagtcctatttttcatgttccatctgtggaaaaacagtctatc
aacacaggaactgaggggatacctacttctggttctttggcactagttgatgatgttttt
gcagaaattgaggagccacctgctcctaccggtgacatggttaatagcaatttacctgtc
cctagtatttcagattataggttattgtgcgggattgacaagtacgtttgcaataaaatt
agtcttttacctaatgatgaggacagtttgcctccacttctggctacatctggagaaaag
ggatcagtagaagaacacccatctcatgagcagatcattttacttcttgaaggcgaaggg
tttcatcctgttacatttgtcctaaatgctaatctgctcgtgaatgtcaaattagtattt
tattcctcagacaaatactggtacttttcaaccaatggattgcatggcttgggacaggca
gaaattattattctattgttatgtttgccaaatgaagatacaattcctaaggacatcttc
agattgttcattaccatatataaggatgctctaaaaggaaaatatatagaaaacttggac
agtattacctttactgagagttttctgaatagcaaggatcatggaggattcctttttatt
acacctacttttcagaaacttgatgatctcccattaccaagtaatccttttctctttgga
attcttatccagaagttagagattccttgggcaaaggttttccctatgcgtttaatgttg
agattgggtgcagaatataaagcatatcctactcctcttaccagcatcagaggccgaaaa
cctctttttggtgaaataggacacactattatgaacttacttgttgaccttcgaaattac
cagtataccttgcataatatagatcagctgttgattcatatggaaatgggaaaaagctgt
ataaaaatacctcggaaaaaatacagtgacgtaatgaaagtaataaattcttctaatgag
catgtcattagcattggagctagttttagtacagaagcagattctcatctagtctgtgta
cagaatgatggtgtttatcaaacacaggccaatagtgccactggacattctagaaaagtg
acaggtgcaagtttcgtggtattcaatggagctctaaaaacatcttcaggatttcttgct
aagtctagtatagttgaagatggcttaatggtacagataactcctgagaccatggatggt
ttgcggctagctttacgagagcaaaaggactttaaaattacatgtggaaaagttgatgca
gtggatctgagagaatatgtggatatctgctgggtagattctgaagaaaagggaaacaaa
ggggttatcagttcagtggatggaatatcactacaaggatttccaagtgaaaaaataaaa
ctggaagcagattttgaaactgatgagaagattgtaaagtgtactgaggtgttttacttt
ctaaaagaccaggatttatctattttatcaacatgttatcagtttgcaaaagaaatagcc
atggcatgtagtgctgcactctgccctcacctgaaaacactaaagagtaatagaatgaac
aaaattggactcagagtttccattgacactgatatggtcgaatttcaggcaggatctgaa
ggtcaccttcttcctcagcattacctaaatgaccttgatagtgctctgatacctgtgatc
cacggtgggacctccaattctagtttaccattagaaatagaattagtatttttcattata
gaaaatcttttttag
DBGET
integrated database retrieval system
