Sciurus carolinensis (gray squirrel): 124986708
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Entry
124986708 CDS
T08117
Name
(RefSeq) protocadherin beta-12-like
KO
K16494
protocadherin beta
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ncar04515
]
124986708
Cell adhesion molecules [BR:
ncar04515
]
Cadherins
Protocadherins
124986708
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Big_9
DnaJ-like_C11_C
Motif
Other DBs
NCBI-GeneID:
124986708
NCBI-ProteinID:
XP_047411275
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All DBs
Position
6:99642174..99646038
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AA seq
798 aa
AA seq
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MENGGDRTLQSRQVLLLFVLLGISQAHSVPGSFTVAEEMQSGSFVGNLAKNLGLELSDLS
TRGAQVVSNDNKQSLQLDVNTGNLLLSQTLDREELCGFTEPCVLHFQVLMKNPLQFLRIE
LQVRDVNDHSPIFLEKEMLLEIPENSPVGAVFLLESAKDLDVGMNAVKSYTINPNSHFHI
KIRVNPDNKKYPELVLDKALDYEEQPELSLILTALDGGSPPRSGTALVRVVVVDTNDNSP
EFEQPFYEVKIPENSILGSLVITVKARDLDSGINGEISYTFSHASEDIQKTFKINQKSGE
ISLTTSLDFETVESYSIIIQATDGGGLFGKSTVRIQVMDVNDNVPEIAVSSITSPIPENS
PETAVMVFSIRDRDSGDNGRMICSIPEDLPFVLKSSFENYYTLETEKTLDRENRAQYNIT
IIVTDFGIPRLKSEHSILILVSDVNDNAPAFSQTSYTLSVRENNSPALHIGSVSATDRDS
GSNAQLTYSLLPPQDPHLPLASLVSINADNGQLFALRALDFEALQAFEFRVGATDRGSPA
LSSQTLVRVVVLDDNDNSPFVLYPLQNASAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA
WLSFQLLKATEPGLFGVWAHNGEVRTARLLSERDAARHRLVVLVKDNGEPPLSASVTLHV
LLVDGFSQPYLPLPEVAPERAQADSLTVYLVIALASVSSLFLFSVLVFVAVRLCRRRRAA
PLGVCSVPEGHFPGHLVDVSGTGTLSQSYQYEVCLRGGTGTNEFKFLRPIIPSLSPHCSG
KETEEAPPFQSSFGFNIQ
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atggagaatggaggggaccgtactctgcagtcacggcaagtcctgcttctctttgttttg
ttgggaatatctcaggcacactctgtgcctgggagctttacggtggcagaggaaatgcag
agtggaagctttgtaggcaatttggcaaaaaacctaggactagagttgagcgacctgtcc
acccgaggagctcaggttgtctctaatgacaacaaacaatctttacagctggacgtaaat
actggaaatttgcttttaagccaaacactagaccgggaggagctctgtggcttcaccgag
ccctgtgtgctgcatttccaggtattaatgaaaaatcctttgcagtttttacggattgag
cttcaagtaagggatgtaaatgaccactctccaatcttcttggaaaaagaaatgctccta
gaaatcccagaaaatagtcctgttggtgctgtgttcttattagaaagtgcaaaggattta
gatgtaggaatgaatgctgtaaaaagctacacaataaaccccaactctcacttccacatt
aaaataagagtcaacccagacaataagaaatacccagagttggttctggacaaggcgctg
gattatgaagagcagcctgaactcagtttgatcctcactgctctggatggtggttcccca
cccagatctgggactgccttagttcgggtggtagttgtagacactaatgacaactcccct
gagtttgagcagccattttatgaggtgaagattccagagaatagcatccttggctcactg
gtaattactgtcaaagcaagggatttagactcaggaataaatggggaaatatcatatacc
ttttcccatgcctcagaagatattcaaaagacatttaaaataaatcaaaagtctggagaa
attagtttaacaacatctttggattttgaaacagttgaatcatactcaataatcattcaa
gccacagatgggggagggctttttggaaagtctacagtcagaattcaggtgatggatgtg
aatgacaatgttcctgaaattgctgtgtcatcaattaccagtccaatcccagaaaattcg
ccagagactgcagtcatggttttcagtatccgagatagagactctggagacaatggaaga
atgatttgttctatcccagaagacctcccattcgtactgaaatcttcatttgagaattac
tataccctagaaacggagaaaacactagacagagagaacagggcccagtacaacatcacc
atcatagtcactgattttggcataccaaggctgaaaagcgagcacagcatactaatcctc
gtctccgatgtcaacgacaacgcccctgccttctcgcagacgtcctacacgctgtcggtg
cgcgagaacaacagccccgccctgcacataggcagcgtcagcgccacagacagagactca
ggcagcaacgcccagctgacctactcgctgctgccgccccaggacccgcacctgcccctc
gcctcgctggtctccatcaacgcggacaacgggcagctgttcgcgctgagggcgctggac
ttcgaggccctgcaggcgttcgagttccgcgtgggcgccacagaccgaggctcgcctgcg
ctgagcagccagacgctggtgcgcgtcgtggtgctggacgacaacgacaactcgcccttc
gtgctctacccgctgcagaacgcctctgcgccctgcaccgagctggtgcccagggcggca
gagccgggctacctggtcaccaaggtggtggcggtggacggagactcgggccagaacgcc
tggctgtcgttccagctgctcaaggccacggagcccgggctgtttggcgtgtgggcgcac
aatggcgaggtgcgcaccgccaggctgctgagcgagcgcgacgcggccaggcacaggctg
gtggtgctggtcaaggacaatggcgagccgccgctgtctgccagcgtcacgctgcacgtg
ctgctggtggatggcttctcgcagccctacctgccgctgccggaagtggcgcccgagcgc
gcgcaggccgactcgctgacagtctacttggtcatcgccctggcctcggtgtcatcactc
ttcctcttttcggtgctggtgtttgtggcggtgaggctgtgcaggcgtcgcagggcggcg
ccgctgggtgtgtgttctgtgcctgagggccactttcctggccacctggtagatgtcagt
ggcactggcaccctgtcccagagctaccagtatgaggtgtgtctcaggggaggtactgga
acaaatgagtttaaatttctaaggccaattatccccagcctttcaccccattgttccggg
aaagaaacagaggaagctcctcctttccaaagtagctttgggttcaatattcagtga
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