Sciurus carolinensis (gray squirrel): 124986709
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Entry
124986709 CDS
T08117
Name
(RefSeq) protocadherin beta-14
KO
K16494
protocadherin beta
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ncar04515
]
124986709
Cell adhesion molecules [BR:
ncar04515
]
Cadherins
Protocadherins
124986709
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
124986709
NCBI-ProteinID:
XP_047411276
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Position
6:99649789..99652497
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AA seq
798 aa
AA seq
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MVIRGACTLRKRQVLLFFVLLGLSQADTQSKRYSVAEETEIGSFVTNLAKDLGLVVEEMS
SREARVVSDDNEKHLHLDLRTGDLLLNEKLDREELCGSTDPCVLHFQVVLENPLQFFRAE
LNVRDINDHSPTFLDKQILIKISESATIGTTFLIENAQDLDVGNNSLQNYTISPNSHFSI
KIQENEDGKIYPELVLDTALDHEQEPELRLTLTALDGGSPPRSGTTLVLIKVLDINDNVP
EFVQSLYEVQVQEDTPIGSSIITISAKDLDTGNYGKIWYTFFHASEDIRKTFEINSISGE
VNLRSQLDFEIIQSYSINIQATDGGGLSEKCTLLVKVLDINDNPPEMTISSIAKTIPENS
SETLVALFSVRDQDSGDNGRILCSIQDDIPFILKPTFKNFFTLVSEKALDRESRAQYNIT
ITVTDFGIPRLKTEHSILILVSDVNDNAPAFSQTSYTLSVRENNSPALHIGSVSATDRDS
GSNAQLTYSLLPPQDPHLPLASLVSINADNGQLFALRALDFEALQAFEFRVGATDRGSPA
LSSQALVRVVVLDDNDNSPFVLYPLQNASAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA
WLSFQLLKATEPGLFGVWAHNGEVRTARLLSERDAARHRLVVLVKDNGEPPLSASVTLHV
LLVDGFSQPYLPLPEMAPERAQADSLTVYLVIALASVSSLFLFSVLVFVAVRLCRRSRAA
PLGVCSVPEGHFPGHLVDVSGTGTLSQSYQYEVCLMGGTGIKEFNFLKPYIPNPEAHDTG
RNMGDDENFGNSFGFSGR
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atggtgatcagaggggcatgcactctacggaaaaggcaagtcctccttttctttgttttg
ctggggttgtcgcaggcagatactcaatccaaacgctattctgtggcagaagaaacagaa
attggctcttttgtgactaatttggcaaaggacctagggttagtggtagaggagatgtcc
tcacgggaggctcgggtagtgtctgatgataatgaaaaacatttgcaccttgatttgagg
acgggagatttactcctaaatgagaaactggacagagaagagctgtgtggttctactgat
ccctgtgtgctgcattttcaggttgtattagaaaaccccttacaattttttcgggctgag
ttgaatgtcagagatataaatgatcactcccctacatttctggacaagcaaatacttatt
aaaatatcagaaagtgctactattggaaccacattcttaatagagaatgctcaggatttg
gatgtaggaaacaacagtctccaaaattacacaataagccccaattctcatttctctatt
aaaattcaagaaaatgaagatggaaagatatacccagaacttgtcctagatacagcatta
gaccatgaacaggaacctgaacttagattgacactcacagcactggatggtggatctcca
cccaggtctgggacaactttggttctcatcaaagttttggacatcaatgataatgtccct
gagtttgtccagagtctctatgaagtgcaagtccaagaggatacacccattggctcctcg
attatcaccatctctgccaaagatttagatacaggaaattatgggaaaatatggtacaca
tttttccatgcatcagaagatattcgtaaaacctttgaaatcaactcgatatctggggaa
gttaacttgagatcacaactggattttgaaataatacagtcctactcaataaatattcaa
gctacagatggtggaggtctctccgaaaaatgcactcttctagttaaagtattagatata
aatgacaacccacccgaaatgacaatttcatcaattgcaaagacaatcccagaaaattca
tcagagaccctggtggctctttttagtgtccgagatcaagactctggggacaatggaagg
atcctttgctctattcaagatgacatcccttttatcttgaaacccaccttcaagaacttt
ttcactctagtttctgaaaaagcactggacagagagagcagagcccaatacaacatcacc
atcacagtcactgattttggcataccaaggctgaaaaccgagcacagcatactaatcctc
gtctccgatgtcaacgacaacgcccctgccttctcgcagacgtcctacacgctgtcggtg
cgcgagaacaacagccccgccctgcacataggcagcgtcagcgccacagacagagactca
ggcagcaatgcccagctgacctactcgctgctgccgccccaggacccgcacctgcccctc
gcctcgctggtctccatcaacgcggacaacgggcagctgttcgcgctgagggcgctggac
ttcgaggccctgcaggcgttcgagttccgcgtgggcgccacagaccgaggctcgcccgcg
ctgagcagccaggcgctggtgcgcgtcgtggtgctggacgacaacgacaactcgcccttc
gtgctctacccgctgcagaacgcctctgcgccctgcaccgagctggtgcccagggcggca
gagccgggctacctggtcaccaaggtggtggcggtggacggagactcgggccagaacgcc
tggctgtcgttccagctgctcaaggccacggagcccgggctgtttggcgtgtgggcgcac
aatggcgaggtgcgcaccgccaggctgctgagcgagcgtgacgcggccaggcacaggctg
gtggtgctggtcaaggacaatggcgagccgccgctgtctgccagcgtcacgctgcacgtg
ctgctggtggatggcttctcgcagccctacctgccgctgccggaaatggcgccggagcgc
gcgcaggccgactcgctgacagtctacttggtcatcgccctggcctcggtgtcatcactc
ttcctcttttcggtgctggtgtttgtggcggtgaggctgtgcaggaggagcagggcagcg
ccgctgggtgtgtgctctgtgcctgagggccactttcctggtcacctggtagatgtcagt
ggcactggcactctgtcccagagctaccagtatgaggtgtgtctgatgggaggtactggg
ataaaggagttcaatttcctgaagccatatattcccaatcctgaagcccatgatactggt
aggaatatgggagacgacgagaactttgggaatagctttggattcagcggtcgataa
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