Sciurus carolinensis (gray squirrel): 124986713
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Entry
124986713 CDS
T08117
Name
(RefSeq) ubiquitin-like protein ATG12 isoform X1
KO
K08336
ubiquitin-like protein ATG12
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04068
FoxO signaling pathway
ncar04136
Autophagy - other
ncar04140
Autophagy - animal
ncar04621
NOD-like receptor signaling pathway
ncar04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
124986713
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
124986713
04136 Autophagy - other
124986713
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
124986713
04622 RIG-I-like receptor signaling pathway
124986713
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124986713
04121 Ubiquitin system [BR:
ncar04121
]
124986713
03029 Mitochondrial biogenesis [BR:
ncar03029
]
124986713
Membrane trafficking [BR:
ncar04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
124986713
Ubiquitin system [BR:
ncar04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitin-like proteins (UBLs)
124986713
Mitochondrial biogenesis [BR:
ncar03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
124986713
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
APG12
ATG8
Motif
Other DBs
NCBI-GeneID:
124986713
NCBI-ProteinID:
XP_047411287
LinkDB
All DBs
Position
6:123695664..123707240
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AA seq
149 aa
AA seq
DB search
MAEESETMLQLPSTAAAGGEGLTDVSPETATPEPPSSAAVSPGTEEPSGDTKKKIDILLK
AVGDTPIMKTKKWAVERTRTIQGLIDFIKKFLKLVASEQLCCFCPILLKFIYVNQSFAPS
PDQEVGTLYECFGSDGKLVLHYCKSQAWG
NT seq
450 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggagtcggagacgatgttgcaactcccttcaactgctgctgctggcggggaa
ggacttacggatgtctccccagaaacagccactccagagcccccttcttctgctgcagtc
tccccagggacagaagagccctccggcgacaccaagaaaaaaattgacatactactaaag
gctgtgggagacacccctataatgaaaacaaagaagtgggctgtagagcgaacccgaacc
atccaaggactcattgacttcatcaagaagttccttaaacttgtggcctcggaacagttg
tgttgcttttgtcccattcttctcaagtttatttatgtgaatcagtcctttgctccttcc
ccagaccaggaagttggaaccctctatgagtgctttggcagtgatggtaaactggtcctg
cattactgtaaatctcaggcctggggatga
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