Sciurus carolinensis (gray squirrel): 124986745
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Entry
124986745 CDS
T08117
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 6 isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar00061
Fatty acid biosynthesis
ncar00071
Fatty acid degradation
ncar01100
Metabolic pathways
ncar01212
Fatty acid metabolism
ncar03320
PPAR signaling pathway
ncar04146
Peroxisome
ncar04216
Ferroptosis
ncar04714
Thermogenesis
ncar04920
Adipocytokine signaling pathway
Module
ncar_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
124986745
00071 Fatty acid degradation
124986745
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
124986745
09143 Cell growth and death
04216 Ferroptosis
124986745
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
124986745
03320 PPAR signaling pathway
124986745
09159 Environmental adaptation
04714 Thermogenesis
124986745
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ncar01004
]
124986745
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ncar04147
]
124986745
Enzymes [BR:
ncar01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
124986745
Lipid biosynthesis proteins [BR:
ncar01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
124986745
Exosome [BR:
ncar04147
]
Exosomal proteins
Exosomal proteins of breast milk
124986745
Exosomal proteins of breast cancer cells
124986745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
124986745
NCBI-ProteinID:
XP_047411375
LinkDB
All DBs
Position
6:138297360..138355721
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AA seq
722 aa
AA seq
DB search
MLTFFLVSGGSLWLLVEFVLSLLEKMQTQEILRILRLPELGDLGQFFRSLSATTLVSMGA
LAAILAYWFTHRPKALRPPCNLLMQSEEVEDSGGARRSVIGGSPQLLTHYYDDARTMYQV
FRRGLSISGNGPCLGFRKPKQPYQWLSYQEVADRAEFLGSGLLQHNCKACTDQFIGVFAQ
NRPEWIIAELACYTYSMVVVPLYDTLGPGAIRYIINTADISTVIVDKPQKAILLLEHVER
KETPGLKMIILMEPFEEALKERGQKCGVVIKSMQAVEDCGQANHHAPVPPQPDDLSIVCF
TSGTTGNPKGAMLTHGNVVADFSGFLKVTEKVIFPRQDDVLISFLPLAHMFERVIQSVVY
CHGGRVGFFQGDIRLLSDDMKALHPTIFPVVPRLLNRMYDKIFSQADTPLKRWLLEFAAK
RKQAEVRSGIIRNNSIWDELFFNKIQASLGGRVRMIVTGAAPASPTVLGFLRAALGCQVY
EGYGQTECTAGCTFTTPGDWTSGHVGAPLPCNHIKLVDVEELNYWTCKGEGEICVRGPNV
FKGYLKDQERTKEALDSDGWLHTGDIGKWLPEGTLKIIDRKKHIFKLAQGEYVAPEKIEN
IYIRSEPVAQIYVHGDSLKAFLVGIVVPDPEVMPCWAQKRGIEGQYSDLCKNKELKKTIL
EDMVRLGKESGLHSFEQVKAIYIHSDMFSVQNGLLTPTLKAKRPELREYFKKQIEELYST
SM
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgctgaccttcttcctggtgtcggggggctccctctggctgttagtggagtttgtcctc
tcacttctggagaagatgcagacacaggagatcctgaggatactgcggctgcccgagctg
ggtgacttgggccagtttttccgcagtctctcagccaccacccttgtgagcatgggtgca
ttggctgccatccttgcctactggttcactcaccggccaaaggccctgagaccaccatgc
aacctcctgatgcagtcagaagaagtggaggacagtggcggggcccggcgatctgtaatc
ggagggagccctcaattgcttacccactactatgatgatgcccggaccatgtaccaggtg
tttcgccgtgggcttagtatctcagggaatgggccctgcctcggcttcaggaagcccaag
cagccttaccagtggctatcctaccaggaggtggctgatagggccgaatttctggggtcc
ggacttctccagcacaactgtaaagcatgtacagatcagtttattggtgtttttgcacaa
aatcgaccagagtggatcattgcagagctggcttgctacacgtattccatggtggtggtg
ccactttatgacactttgggccctggggctatccgctacatcatcaatacagcagacatc
agcactgtgattgtggataaacctcagaaagctatacttctactagagcatgtggagagg
aaggagactccagggctcaagatgatcatcttgatggagccgtttgaggaagccctgaaa
gagagagggcagaagtgcggggtggttatcaagtccatgcaagctgtggaggactgtggc
caagcgaatcaccatgctcctgtgcccccacagcctgatgacctctccattgtgtgtttc
acaagtggcacaacagggaaccccaaaggtgcgatgctcacccatgggaacgtggtggct
gatttctcaggctttctgaaagtgacagagaaagtgatctttccgagacaggacgatgtg
ctcatctccttcctgcctctggctcacatgtttgagagagtaatccagtctgttgtctac
tgccacggagggcgcgttggcttcttccagggagacatccgccttctctcagatgacatg
aaggctctacaccccaccatcttccctgtggtcccacgactgctgaaccggatgtatgac
aagatcttcagccaggcagacactccactgaagcgctggctgctggagttcgcagcaaag
cgtaagcaggctgaggtccggagtggaatcatcagaaataacagtatctgggatgaactc
ttctttaataagattcaggccagtcttggtggacgtgttcggatgattgttactggagca
gcccctgcatcaccaacagtcctgggatttctccgggcagccctggggtgccaggtttat
gaaggttatggccaaactgagtgtactgctggatgcaccttcaccacacctggggactgg
acttcagggcatgtgggggcacctctgccctgcaaccatatcaagcttgttgatgtggag
gaactgaactattggacctgcaaaggagagggagagatctgtgtgagaggaccaaacgtg
ttcaaaggctacttaaaagatcaggagaggacaaaggaagctctggacagtgacggctgg
cttcacactggggacattgggaaatggctgccggagggaactctcaaaattattgatcgg
aaaaagcacatatttaaacttgctcagggagaatatgttgcacctgagaagatcgagaac
atctatatccggagtgaacctgtggcgcaaatctatgtccatggggacagcttaaaggcc
tttttggtgggcattgtagtgcctgaccctgaagtcatgccctgctgggcccagaagaga
ggaattgaaggacaatattcagatctctgcaaaaataaggagctgaagaaaaccattttg
gaagatatggtaaggttaggaaaagaaagtggactccattcttttgaacaggttaaagcc
atttacatccattctgacatgttctcagttcaaaatggcttgctgacaccaacattaaag
gctaagagacccgagctgagagagtacttcaaaaaacaaatagaagagctttactcaacc
tccatgtga
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