Sciurus carolinensis (gray squirrel): 124986747
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Entry
124986747 CDS
T08117
Name
(RefSeq) interferon regulatory factor 1 isoform X1
KO
K09444
interferon regulatory factor 1
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04625
C-type lectin receptor signaling pathway
ncar04668
TNF signaling pathway
ncar04917
Prolactin signaling pathway
ncar05133
Pertussis
ncar05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04668 TNF signaling pathway
124986747
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
124986747
09152 Endocrine system
04917 Prolactin signaling pathway
124986747
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
124986747
09171 Infectious disease: bacterial
05133 Pertussis
124986747
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncar03000
]
124986747
Transcription factors [BR:
ncar03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
124986747
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF
Motif
Other DBs
NCBI-GeneID:
124986747
NCBI-ProteinID:
XP_047411385
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All DBs
Position
6:137824574..137831976
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AA seq
326 aa
AA seq
DB search
MPITRMRMRPWLEMQINSNQIPGLIWINKEEMIFQIPWKHAAKHGWDINKDACLFRSWAI
HTGRYKAGEKEPDPKTWKANFRCAMNSLPDIEEVKDQSRNKGSSAVRVYRMLPPLTKNQR
KERKSKSSRDTKNKAKRKSCGDSSPDTFSDGLSSSTLPDDHSSYTAQGYVGQDLEMEQVL
TPAPSPCVVSSTLPDWHIPVEIVPDSTSDLYNFQVSPMPSSSEAATDEDEEGKLPEDIMK
LLEQSEWQPTSVDGKGYLLNEPGAQPTSVYGDFSCKEEPEVDSPGGDIGLSLHRVFTDLK
NMDTLWLDNMLPPVRLPSIQAIPCAP
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgcccatcactcggatgcgcatgagaccctggctagagatgcagattaattccaaccaa
attcccgggctgatctggattaataaagaggagatgatcttccagatcccatggaagcat
gctgccaagcatggctgggacatcaacaaggatgcctgtttgttccggagctgggccatt
cacacaggccgatacaaagctggggaaaaggaaccagatcctaagacgtggaaggcaaac
ttccgctgtgccatgaactccttgccagacatagaggaggtgaaggaccagagcaggaac
aagggcagctcagctgtgcgggtataccggatgcttccacccctcaccaagaaccagaga
aaagagagaaagtccaagtccagtcgagacactaagaacaaggccaagagaaagtcatgt
ggggattccagccctgacaccttctctgacggactcagcagctccactctgcctgatgac
cacagcagctatacagctcagggatatgtggggcaggacctggagatggagcaggtgctt
actccagcaccatcaccgtgtgttgtcagtagcactctccccgactggcacatcccagtg
gaaattgtgccagacagcaccagtgacctgtataacttccaggtgtcacccatgccctcc
tcctctgaagctgcaacagatgaggatgaggaagggaaattacctgaggacatcatgaag
ctcttggagcagtctgaatggcagccgacaagtgtagatgggaaggggtacctgctcaat
gaacctggggcccagcccacctctgtatatggagacttcagctgcaaggaggagcctgaa
gttgacagccctgggggagatattgggctcagcctacaccgtgtcttcacagatctgaag
aacatggacaccctctggctggacaacatgctgcccccagtcaggctgccctccatccaa
gccattccttgtgcaccatag
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integrated database retrieval system
