KEGG   Sciurus carolinensis (gray squirrel): 124986772
Entry
124986772         CDS       T08117                                 
Name
(RefSeq) little elongation complex subunit 1-like isoform X1
  KO
K26143  little elongation complex subunit 1
Organism
ncar  Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ncar03021]
    124986772
Transcription machinery [BR:ncar03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Little elongation complex (LEC)
     124986772
SSDB
Motif
Pfam: Laminin_II
Other DBs
NCBI-GeneID: 124986772
NCBI-ProteinID: XP_047411447
LinkDB
Position
6:4275719..4332321
AA seq 2266 aa
MMPGETHSAAPGTAADLSRCQGCASLQQNLNEYVDALITLKQKIINTDNLLTEYQKKCDE
LQFARRENSTLHHQVEQMLQKISPLQKCQEELGSLKAELEEKKSSLKLYQDTHQEYARVK
EECLKSDAQKKKLEAKVKKLEEAAVKQTQDFKQLRNEKKILEKEFKKTQERLDEFSKQKN
EKELRHIGTQISSDSYGSIDKRKVKLLLKELWLCVNTAHRLPSEGSRRVPGKPAKEDTRS
GASGEDGTLPPAQGGPLRASDVQTCLTKLSLEMEGDFASCESVDRERPGSTSHIVDHVSS
EGGSAKVSVQIADDGDRTDLSDHGQFFDEDLQAAIDFFKLPPPLLSPVPSPPLMSSHQPG
SLPSSLAPETYFGEYTDSSDNDSAQLQNSTDSLSEDDTTESQDYFGLSRKSKGSSTWGEK
TKSHEAIQALNKLGVNKVTTVEFETLTATLREPSTTTSSLAREEHWTASSEFTSNRKRDI
LNEAKRQVEIREMVQSVQMEKTSHKPSRGLWVEKLSGSLAQEKEAATGKSDLCYSPIGKR
PLSELTRCEGKTFSSKVIGSPKSEFTRWTLPDEMTSESDCVASSGHFQRISREVVKERED
VQGSTVGESLEPQEDNPRDVMSLAGLDAKARFCSSSTSVPGSVCSHSQSSRLKYVNDADI
PTQGIPTELHHSEQKVPTKTLNTLLVQSEPAECSILESNLKKNSLGASSPELGASHFEEQ
NCWEREHASIVKGRPEVYSLSQSVFRKVTKEGQCKTQEPTVEFTLRKSELTSLVDPRAGL
VRSGSSLVKSTSWHHSDLLRRGGEESLRASSEHEQKTNQQLEKSVPALQNRGSAAMLESP
REDDCPVEFKATASLLSNQVSVITKQIRPEKIESAHLEHVRLPGNEPTSAAENCGNEADD
GSSAAKCGKEDEVTSDFQEVAAVKSTSPEVSASCRKLDFSSPSGSLPAENFDCTTNSKLS
FSPENIFIQSQDLVRKASVQGEVREPRTSPHTTDSDPCVGEGSQLLPAEARVLGSCPVEV
PGGVTARPVTEALTAASPSNSPQDVPELSQLASGMPSGPFPECIVTTDAAFSSVSCRKDE
EAPALSPSSLPGTSYCYTGIRGGGEEETEVEGSEAFSCSEGEHEAESMLGSEQQCATSDS
GEDLGGPGAGATGPSLEMAYLTSALQDFNISTFTDIDRLSTSEVVMFLESCQLKDFSSGN
SVSECSSKETLNKEMNKELKQSGNSGEKCREQHCEEETLETPEEWVESEEDNCSLKDPSQ
LSQCSLETLSEVLTKIGQELQTNSEDCSGKDTGNLILVDIPNSLTTEELKEKAPRQPTSS
STAHTPELPPLTTTGDNRSGSPVSDGSHPGDTHEDAAKTPDSREQGLPESGGPLALCPDS
TEQPRVEHSSGGEAEATFQCQISTVTSEVINVLINKDQNLVIEKGDNWTIISGVSVSPDV
DQVILCDVPGDVAVSQDQGGLEAGFVSVTSVEKSPETSHTDPPFQGPPCGSNLSGVQEDV
SNSGQSTNFDKSRLRNRPVKPSIWISSQIYDQSFETQNVASDHTYFNSKLEPSGKNKNRS
KMSNKDQSNKPVKTLASGKGETHQSEVPQLPSGERGNTKTQRSQTQPILANADTSTPTDC
SPDTLSKIRQEVGPPLPPLLAPLIATPPRTSQPLSPLVSSSSPSPPASPAGQISPSCETP
VPPMLSPWPEDPQRTSPGPSPSPSAAVTSGRIVSSPLQFCAATPKHALPVPGRLPPGAPG
HTAGGGPQENSVKILDTMYPELSARARTLNILKGNIQLSRGSSADCKASAGPVSALIGFK
AITSKSTAFIKTGGSSASGAGQGRSREMGAQQESGGKRALSASTLQSAKRLRLDSESPEP
DSRGAPTEEVHQSLPGSLPQAEVVMAEEGSVPAGSSVSRFSVSPEEAVDLHGTAIAHALK
KVAESSFDLLPVIRSHVYVGNISKKPVMRDQEKEVVYEFSTAKKHLADCLLHSILSELKL
QKTSRDHSYIHALCRVYVGICRQLGDLERARLFCYSLLKEDFPESEKLTLFIANMWHDVF
LSPSVMSTAMQLVARQRAKGEVLNCLRAFLNWEKNAPVDVGIMVSKLLLTIQLCPKTEFQ
SSEKFGEDLSDNIWEYIFAIDLLCCHKKWIWTHDNIISKELWPVMDKWIKYRKGHANVAY
TPDVIIASILRLIGRLGQLGLKEGFPTAVKNISSVIGMFIQHAQDEDIPWGIQLAAVYAL
CDLSPSNPAEISKILEAWRRQTSNSIPSAVVSCLEEVGSLSAEGLS
NT seq 6801 nt   +upstreamnt  +downstreamnt
atgatgccgggcgagacccactcggcggcgcccgggacggcggcggacctctcgcggtgt
cagggctgtgcttccttgcagcagaacttaaatgaatatgttgatgcattgattaccttg
aaacaaaaaattatcaatacagataatttgctaacagaatatcagaagaaatgtgatgag
ctgcagtttgcaagaagagaaaatagtactctacatcaccaagtggagcagatgcttcag
aaaatttctcctctgcagaagtgtcaggaagaattgggatctttaaaagcagagctagaa
gagaagaagagttctctaaagttgtatcaggacactcaccaggaatatgctcgtgtaaaa
gaggaatgcttgaaaagtgatgcacagaagaagaaactcgaagctaaggtgaagaagctg
gaagaggctgctgtcaagcaaactcaagacttcaaacaactaagaaatgaaaagaaaata
cttgaaaaggaatttaagaagacacaggaaagacttgatgaattttctaaacagaaaaat
gagaaggaattgagacatattggaacacaaatttcaagtgattcatatggaagtatagat
aaaagaaaagtgaaactgctccttaaggaactctggctctgtgtaaatacagcacaccga
ctacccagtgaaggcagcagacgtgtcccaggaaaacctgccaaagaagataccaggtct
ggagcatctggggaagatggcacactacctccagcacaaggtggtcctctcagggcctca
gatgtgcagacatgcctcacaaaactgtccctggagatggagggtgactttgcttcatgt
gaaagtgtggacagagagagacccggcagcacaagccacattgttgaccacgtttccagt
gagggtgggagtgccaaggtctcggtgcagattgctgatgatggtgacaggactgacttg
tctgaccatggtcagtttttcgatgaagatcttcaggctgcaattgacttcttcaaactc
cctcctcctcttctgtctccagtaccttcaccccctctgatgtcatcacatcaaccgggc
tccttaccttcttcactcgcacctgaaacctactttggagagtatacagattccagtgat
aatgactcagcccaactacaaaattctactgactctctttcagaagatgatacaactgaa
tcacaggattattttggcttatccagaaaaagtaaagggagtagtacctggggggagaaa
accaaatcacatgaagctatccaggctttaaataaattgggagtaaataaagtgacaacg
gttgaatttgagactttaacagcaacactgagagaaccttcaacaaccacatcctcttta
gctcgggaagagcactggacagcgtcatctgaatttacgagcaatagaaaaagagacatt
ttaaatgaggcaaaacgacaggtggagatcagggagatggttcagtctgtgcaaatggag
aagacatctcataagccctccaggggtctctgggttgagaagttgtcgggcagcttagca
caagagaaggaggcagccactgggaagtcagacttgtgttattctcccattggcaagagg
ccattaagtgaactcactagatgtgaaggaaaaaccttttcatccaaagtgataggatca
cccaaatcagaattcactaggtggacacttcctgatgaaatgacttctgaatcagactgt
gtagcaagttctggccattttcagagaatatctagagaagtggtgaaggaaagagaagat
gtgcaagggtccactgtgggagaatcacttgaaccacaagaggacaatccaagggatgta
atgagtttggcaggacttgatgctaaagccaggttctgttcctcttctacctcggtccca
gggtctgtctgcagtcattcccagtcttcacggctaaagtatgttaatgacgcagatatt
ccaactcaaggaatcccaactgaactacatcattcagaacaaaaggtaccaacaaaaact
ctgaacaccttacttgtgcagtctgagccagcagagtgttctatactagaaagcaacctg
aagaagaacagcttgggtgcttcgagccctgaattgggagcatctcattttgaagagcag
aattgctgggagagagaacatgcaagcattgtaaaaggaaggcctgaagtctactcactt
tctcagtcggtgtttaggaaggtcacaaaagaggggcagtgtaaaactcaagaaccaaca
gttgagttcacactacgtaagtcagagttgacctcactagtggatcctcgggctggcttg
gtcaggagtggctctagtcttgttaaaagcacttcctggcaccatagtgatttgctaagg
agaggtggtgaagagagtctgagagcttcctcagaacatgaacagaagactaatcagcag
ctagaaaagtcagtgccagcactacagaatagaggttcagcagccatgcttgaatctccc
agagaagatgactgtccagtagaattcaaggccactgcttcattgctgtctaatcaagtg
tcagttatcacaaagcagataagacctgaaaagattgaaagtgctcacttggaacacgtg
agacttcctgggaatgagcccacttcagcagcagaaaactgtggtaacgaagctgatgat
ggttcttctgcagcgaaatgtggaaaagaggatgaggtgacatcagacttccaggaagtg
gctgccgtgaaaagcacttcaccagaggtttctgcctcttgtagaaaactagattttagt
tctccaagtggatctttaccagcagaaaattttgattgtaccacaaatagtaagttgtct
ttctcgcctgaaaacatcttcatccaaagtcaagaccttgtaaggaaagcttcagtgcag
ggagaggtgagggagcccaggacctctcctcacaccacagattcagacccctgtgtgggg
gagggcagtcagctgcttccggctgaagcaagggtgttgggaagttgtcctgttgaagtg
cccggtggagtcacagcaagacctgtcactgaggccctgactgctgcaagcccttctaac
tcaccgcaggatgtgcccgagctttcacagctggcatctggaatgcctagtggccccttt
ccagaatgcattgtcaccacagatgctgcgttttcttcagtgtcttgcagaaaagatgag
gaggcaccagctctctccccaagcagtcttcctggcacctcatactgctacacaggcatc
cgggggggaggggaagaggagaccgaggtagaggggagtgaggccttcagctgcagtgag
ggtgagcatgaggctgagtccatgctgggaagcgaacagcagtgtgctaccagcgactcg
ggggaagatttgggaggtccaggggctggtgcaactggaccttccctagagatggcttat
ctgacctcagctctgcaagattttaacataagtactttcactgacatagacagactttct
acatcagaagttgtaatgtttcttgaaagttgtcagttaaaggattttagttcagggaac
tctgtttcagaatgttctagtaaagaaaccctaaacaaagaaatgaacaaagagttaaag
caaagtggaaactctggagaaaaatgtagggagcaacactgtgaagaagaaacacttgag
acccccgaagagtgggttgaatctgaagaagataactgttctttaaaagatccaagccaa
ctttctcagtgttctttggaaacactatctgaggttcttaccaagattgggcaagaactg
cagacaaactctgaggactgcagtggtaaggatactggtaatttaattcttgtagatata
cctaacagtctgacaactgaagaattgaaagaaaaagccccacgtcagccaacaagtagt
tccacagcccatacccctgaactgcccccacttaccaccactggggacaatagaagtggc
tctcctgtgagtgatggatctcatcctggggacacacacgaggatgcagccaagacccct
gacagcagagagcagggcctgccagagagtggggggccattggccctgtgccctgactcc
acagagcagccaagggtggagcacagttctggtggggaggcagaggcgacgtttcagtgt
cagatatccacagtgacctcagaagttatcaacgtacttataaataaggatcagaatctt
gtcattgaaaagggggacaactggacaatcatcagtggtgtgtctgtctccccagatgtg
gaccaggttatactgtgtgacgtccctggggacgtagctgtttctcaggatcagggaggg
ctagaagctggttttgtttcagtgacttctgtggaaaagtccccagagaccagtcacacg
gaccctccctttcaggggcctccttgtggcagtaatctttcaggtgttcaagaggatgtt
tcaaacagtggtcagagtaccaactttgataaaagtcgcttgcggaacagacctgttaag
cccagcatatggatcagttctcaaatatacgatcaatcatttgagactcagaatgttgca
tctgatcacacatattttaactcaaaactggagccatctggcaaaaataagaatcggtca
aagatgtcaaacaaagatcaatcaaacaaaccagtaaagactttagcatcaggaaaaggt
gaaactcatcagagtgaggttcctcagttgccttcaggtgaaagaggtaacacaaaaact
caaagaagtcaaactcagcccattctggcaaatgcagatacctctactcccaccgactgt
tctcccgacacgctgagcaagataaggcaagaggtgggcccccctctgcctcctctgctt
gctcctctgatagctacccctccaaggacctcacagccactttctcctctggtatcaagt
tctagtccctccccacctgcctctcctgctggccagatttctccttcatgtgaaactcca
gtgcctcctatgttgtccccctggccagaagacccccagcggacctctccagggccctct
ccatctccatctgctgcagtgaccagtggcagaatagtgtcctctcctttgcagttctgt
gcagccacaccaaagcatgcacttcctgtgcccggcagactcccacccggtgctcctggc
cacactgctggaggagggccacaggagaattctgtcaaaatccttgataccatgtaccca
gagttatctgccagggcacggaccctcaacatcctcaaggggaacatccagctctcccga
ggttcctctgcagactgtaaggcctcagcagggcctgtcagtgctctcattggcttcaaa
gccatcacttcaaaatcaactgctttcatcaaaacagggggcagctctgccagtggtgct
ggccaaggtaggtcgagagagatgggggcgcagcaggagtcaggtgggaaaagagcgctg
tcagcttccaccctgcagagtgctaagagattgcgcctggacagtgagtccccagaacca
gactccaggggagcccctacagaagaagtccaccagagcctcccaggaagcctccctcag
gctgaagttgtcatggcagaggagggttcggtcccagctggcagttcagtgtcacggttc
tctgtcagccctgaagaagccgtggacttgcatggcacggccatagctcacgctctcaag
aaagtcgctgagtcttcttttgacctgttacctgtcattcgtagtcatgtgtacgtgggc
aacatctccaaaaagccggtaatgagagaccaggagaaggaggtcgtttatgagtttagc
acagccaaaaagcatttggcagactgcttgcttcactccattctctcggagctaaaactt
cagaagacatctagggaccacagttacatccatgccctgtgcagggtgtatgtgggcatc
tgccggcaactgggagacctggaaagagctcgcttgttctgctacagtctgcttaaggaa
gattttccagagtctgagaagttgactctgtttattgccaacatgtggcatgatgtattt
ctttctccctcggtgatgagtaccgccatgcagttggttgccaggcagcgtgccaaggga
gaggttctgaactgtttgagagcctttctcaattgggaaaagaatgcacctgtagatgtt
ggcatcatggtttctaagctgcttttgaccatacagctatgtccaaaaacagaatttcag
tccagtgagaagtttggtgaagacttaagtgataatatttgggaatacatttttgccatt
gatctgctatgctgtcataagaaatggatttggacacatgataacatcataagcaaggag
ctgtggcccgtcatggataagtggataaagtacaggaaaggacatgcaaatgtggcatat
actcccgatgttatcatagcatccatactaagactgattggtcgcttaggccaattgggt
ttgaaggaaggatttccaactgctgtgaaaaatattagttcagttattggtatgttcata
caacatgctcaggatgaagatataccatggggtatacagttagcagccgtgtatgctctt
tgtgacttgagtcccagcaacccagcagaaatatccaagatcctggaagcctggcggaga
cagacctccaacagcatcccatctgcagtcgtcagctgcctggaagaagtcggctccctg
agcgcagaggggctcagctaa

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