Sciurus carolinensis (gray squirrel): 124986776
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Entry
124986776 CDS
T08117
Name
(RefSeq) reticulophagy regulator 1 isoform X1
KO
K23880
reticulophagy regulator
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124986776
Membrane trafficking [BR:
ncar04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
124986776
ER-phagy
ER-phagy recepters
124986776
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Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_RETREG1-3
Reticulon
RPN13_C
Motif
Other DBs
NCBI-GeneID:
124986776
NCBI-ProteinID:
XP_047411461
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All DBs
Position
6:complement(14357073..14481675)
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AA seq
494 aa
AA seq
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MASAAPQEHAQEGCPAPAAAERAPPPPPPAPPEEEAQEEAPEEGAAAAGAGPQVEEAAGR
APAAVTWLLGEPVLWLGCCAEELLSWKRPLRSLLGFVGANLLFWFLALTPWRVYHLISVM
ILGRVIMQIIKDMVLSRTRGAQLWRSLSESWEVINSKPDERPRLSHCIAESWMNFSIFLQ
EMSLFKQQSPGKFCLLVCSVCTFFTILGSYIPGVILSYLLLLFAFLCPLFKCNDIGQKIY
SKIKSVLLKLDFGIGEYINQKKRERAEADKEKSHKDDSELDFSALCPKISLTVAAKELSV
SDTDVSEVSWTDNGTFNLSEGYTPQTDTSDDLDRPSEEVFSRGLSDFPSLENGTGTNDED
ELSLGLPTELKRKKEQLESGHRSSKEKQSAAGLTLPLNSDQTFHLMSNLAGDVITAAVTA
AIKDQLENAQQVLAQAAPSPGEDTDTEEGDDFELLDQSELDQIESELGLTQDQEAEAQQS
KKSSGFLSNLLGGH
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcgcggcgccccaggagcacgcccaggaaggatgcccggctcccgctgccgcg
gagcgggcgccgccgccgccgcccccggcgcccccggaggaggaggctcaggaagaagcc
ccggaggaaggcgccgcggcggccggcgcggggccgcaggtggaggaggccgcgggccgg
gcgccggccgccgtgacctggctgctcggggagccggtgctgtggctgggctgctgcgcc
gaggagctcctgagctggaagaggccgctgcgcagcctcctcggcttcgtgggtgccaac
ttgctgttctggttccttgcattgactccctggagagtgtatcatctgatttccgtcatg
atacttgggcgtgttattatgcaaataataaaggatatggttttgtctagaacaagaggt
gcacagttgtggaggagcctcagcgaaagctgggaagtcatcaattccaaaccagatgaa
agacccaggctcagccactgtattgcagaatcatggatgaatttcagcatatttcttcaa
gaaatgtctctttttaaacagcagagccctggaaagttttgtctcctggtctgcagtgtg
tgcacattttttacaatcttgggaagttacattcctggggttatactcagctatctactg
ttactgtttgcgtttttgtgtccactgtttaaatgtaatgatattggacaaaaaatctac
agcaaaatcaaatcggttctgttgaaactagattttggaattggagaatatatcaatcag
aagaaacgagagagagctgaagcagataaagaaaaaagtcacaaagatgacagtgaatta
gacttttcagctctttgtcctaagattagcctcacagttgcggccaaagagttatctgtg
tctgacacagatgtctcagaagtatcttggactgataatgggactttcaacctttcagaa
ggttacactccacagacagacacttctgacgatcttgaccggccaagtgaggaagttttc
tctcgaggtctttcagattttccatctctagaaaatggcacgggaacaaatgatgaagat
gaattaagccttggcttgcccactgagctcaagagaaaaaaggaacagctggagagtggt
cacagatcaagcaaagagaagcagtcagcagctggtctcacccttcctctgaatagtgac
caaaccttccacttgatgagcaacctggctggggacgtcatcacagctgcagtcactgct
gctattaaagaccagctagagaatgctcagcaagtccttgctcaggctgcacccagccca
ggggaggatacagacactgaagaaggtgatgactttgaattacttgaccagtcagagctg
gatcaaattgagagtgaattgggacttacacaagaccaggaagcagaagcacagcaaagt
aagaaatcttcaggcttcctttcaaatctacttggaggccattaa
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