Sciurus carolinensis (gray squirrel): 124986787
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Entry
124986787 CDS
T08117
Name
(RefSeq) LOW QUALITY PROTEIN: fibrillin-2-like
KO
K23342
fibrillin 2/3
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
124986787
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ncar00536
]
124986787
Glycosaminoglycan binding proteins [BR:
ncar00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
124986787
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
FXa_inhibition
EGF
hEGF
TB
EGF_3
Plasmod_Pvs28
Fibrillin_U_N
EGF_FBN_1st
Cadherin
Motif
Other DBs
NCBI-GeneID:
124986787
NCBI-ProteinID:
XP_047411482
LinkDB
All DBs
Position
6:111166436..111394453
Genome browser
AA seq
2913 aa
AA seq
DB search
MGRRRRLCLQPYLVWLGCVALWAQGTAGQPQPPPPKPLRPQPQPQQVRPATAGSEGGFVA
PEYREEGTSAASRVRRLGQQDVLRGPNVCGSRFHSYCCXGWKTLPGGKQCIVPICRNSCG
DGFCSRPNMCTCSSGQISPTCGAKSSTQQCSVRCMNGGTCADDHCQCQXGFIGTYCGQPV
CENGCQNGGRCIGPNRCACVYGFTGPQCERDYRTGPCFTQVNNQMCQGQLTGIVCTKTLC
CATIGRAWGHPCEMCPAQPQPCRRGFIPNIRTGACQDVDECQAIPGICQGGNCINTVGSF
ECRCPAGHKQSETTQKCEDIDECSIVPGICETGECSNTVGSYFCVCPRGYVTSTDGSRCI
DQRTGTCFSGLVNGRCAQELPGRMTKTQCCCEPGRCWGMGTIPEACPVRGSEEFRRLCMD
GLPMGGIPGSAGSRPGGTAGNGFVPNGNGNGYGPGGTGFLPIPGGNGFSPGVGGAGVGAG
GQGPIITGLTILNQTIDICKHHANLCLNGRCIPTVSSYRCECNMGYKQDANGDCIDVDEC
TSNPCTNGDCVNTPGSYYCKCHAGFQRTPTKQACIDIDECIQNGVLCKNGRCVNTDGSFQ
CICNAGFELTTDGKNCVDHDECTTTNMCLNGMCINEDGSFKCICKPGFVLAPNGRYCTDV
DECQTPGICMNGHCINNEGSFRCDCPPGLAVGVDGRVCVDTHMRSTCYGGIKKGVCVRPF
PGAVTKSECCCANPDYGFGEPCQPCPAKNSAEFHGLCSSGVGITVDGRDINECALDPDIC
ANGICENLRGSYRCNCNSGYEPDASGRNCIDIDECLVNRLLCDNGLCRNTPGSYSCTCPP
GYVFRTETETCEDINECESNPCVNGACRNNLGSFNCECSPGSKLSSTGLICIDSLKGTCW
LNIQDNRCEVNINGATLKSECCATLGAAWGSPCERCELDAACARGFARIKGVTCEDVNEC
EVFPGVCPNGRCVNSKGSFHCECPEGLTLDGTGRVCLDIRMEQCYLKWDEDECIHPVPGK
FRMDACCCAVGAAWGTECEECPKPGTKEYEALCPRGPGFANRGDVLTGRPFYKDINECKA
FPGMCTYGKCRNTIGSFKCRCNSGFALDMEERNCTDIDECRISPDLCGSGICVNTPGSFE
CECFEGYESGFMMMKNCMDIDECERNPLLCRGGTCVNTEGSFQCDCPLGHELSPSREDCV
DINECSLSDNLCRNGKCVNMIGTYQCSCNPGYQATPDRQGCTDIDECMIMNGGCDTQCTN
SEGSYECSCSEGYALMPDGRSCADIDECENNPDICDGGQCTNIPGEYRCLCYDGFMASMD
MKTCIDVNECDLNSNICMFGECENTKGSFICHCQLGYSVKKGTTGCTDVDECEIGAHNCD
MHASCLNVPGSFKCSCREGWVGNGIKCIDLDECSNGTHQCSINAQCVNTPGSYRCACSEG
FTGDGFTCSDVDECAENINLCENGQCLNVPGAYRCECEMGFTPASDSRSCQDIDECSFQN
ICVFGTCNNLPGMFHCICDDGYELDRTGGNCTDIDECADPINCVNGLCVNTPGRYECNCP
PDFQLNPTGVGCVDNRVGNCYLKFGPRGDGSLSCNTEIGVGVSRSSCCCSLGKAWGNPCE
TCPPVNSTEYYTLCPGGEGFRPNPITIILEDIDECQELPGLCQGGNCINTFGSFQCECPQ
GYYLSEETRICEDIDECFAHPGVCGPGTCYNTLGNYTCICPPEYMQVNGGHNCMDMRKSF
CYRSYNGTTCENELPFNVTKRMCCCTYNVGKAWNKPCEPCPTPGTADFKTICGNIPGFTF
DIHTGKAVDIDECKEIPGICANGVCINQIGSFRCECPTGFSYNDLLLVCEDIDECSNGDN
LCQRNADCINSPGSYRCECAAGFKLSPNGACVDRNECLEIPNVCSHGLCVDLQGSYQCIC
HNGFKASQDQTMCMDVDECERHPCGNGTCKNTVGSYNCLCYPGFELTHNNDCLDIDECSS
FFGQVCRNGRCFNEIGSFKCLCNEGYELTPDGKNCIDTNECVALPGSCSPGTCQNLEGSF
RCICPPGYEVKSENCIDINECDEDPNICLFGSCTNTPGSFQCICPPGFVLSDNGRRCFDT
RQSFCFTNFENGKCSVPKAFNTTKAKCCCSKMPGEGWGDPCELCPKDDEVAFQDLCPYGH
GTVPSLHDTREDVNECLESPGICSNGQCINTDGSFRCECPMGYNLDYTGVRCVDTDECSI
GNPCGNGTCTNVIGSFECNCNEGFEPGPMMNCEDINECAQNPLLCAFRCMNTFGSYECTC
PVGYALREDQKMCKDLDECAEGLHDCESRGMMCKNLIGTFMCICPPGMARRPDGEGCVDE
NECRTKPGICENGRCVNIIGSYRCECNEGFQSSSSGTECLDNRQGLCFAEVLQTMCQMAS
SSRNLVTKSECCCDGGRGWGHQCELCPLPGTAQYKKICPHGPGYTTDGRDIDECKVMPNL
CTNGQCINTMGSFRCFCKVGYTTDISGTSCVDLDECSQSPKPCNFICKNAEGSYQCSCPR
GYVLQEDGKTCKDLDECQTKQHNCQFLCVNTLGGFTCKCPPGFTQHHTACIDNNECGSQP
SLCGAKGICQNTPGSFNCECQRGFSLDATGLNCEDVDECDGNHRCQHGCQNILGGYRCGC
PQGYIQHYQWNQCVDENECSNPNACGSASCYNTLGSYKCACPSGFSFDQFSSACHDVNEC
SSSKNPCNYGCSNTEGGYLCGCPPGYYRVGQGHCVSGMGFNKGQYLTLDTEVDEENALSP
ETCYECKINGYSKKDGRQKRSIQDPMPSTVEHISLESVDIDSPINMKFNLSGFGSKEHIL
ELMPAIEPLNNHIRYVISQGNDDGIFRIHQRNGLSYLHTAKKKLTPGTYTLEITSIPLYR
KKELKKLEESNEDDYLLGELGEALRMRLQIQLY
NT seq
8742 nt
NT seq
+upstream
nt +downstream
nt
atggggagacggaggcggctgtgtctccagccctatttggtgtggctgggctgcgtggcg
ctctgggcgcagggcacagccggccagccccagcctccaccgcctaagccactccggcca
cagccacagccgcaacaggttcggccggcaacagcgggttccgaaggcgggttcgtggcg
cccgagtaccgggaagagggcacctcagcggcgagccgcgtccgcaggctgggacagcag
gacgtcctccgagggcctaacgtgtgcggctccaggttccactcctattgctgcncagga
tggaagacgctccctggagggaaacagtgcattgtcccaatttgtagaaatagttgtgga
gatggattttgttcccgtcctaacatgtgtacttgttccagtggccaaatatcaccaact
tgtggagcaaaatcaagtactcagcagtgcagcgtgaggtgcatgaatggcgggacctgt
gcagatgaccactgccagtgccagnaaggatttattggaacttactgtggacaacctgtc
tgtgaaaatggatgccagaatggtgggcgctgtatcggacccaaccgttgtgcttgtgtt
tatggattcaccggtccacagtgtgaaagagattataggactggcccctgtttcactcag
gtcaacaaccagatgtgccaagggcagctgactggtatagtctgcacgaagactctgtgc
tgtgccaccattgggcgggcctggggccatccttgtgagatgtgtccagctcagccgcag
ccctgtcggcggggtttcatccccaacatccgcactggagcttgccaagatgttgatgaa
tgccaggccattccaggaatatgccagggaggaaattgcatcaatacagtgggctctttc
gaatgcagatgccctgctggtcacaagcagagtgaaacaactcagaaatgtgaagacatc
gatgagtgcagcatcgttcctgggatatgtgagactggtgaatgttccaacaccgtggga
agctacttttgtgtttgtccacgtggatatgtaacctcaacagatggttctcggtgtatc
gatcagagaacaggcacgtgtttctcgggcctggtgaatggtcgctgtgcacaagaactc
ccaggcagaatgacaaaaacccagtgctgctgtgagccaggacgctgctggggcatggga
accatccctgaagcctgtcccgtcagaggttctgaggaatttcgcagactttgcatggat
ggacttccaatgggagggattccagggagtgctgggtccagacctggaggcactgcaggg
aatggctttgtcccaaatggcaatggcaatggctatggcccaggagggacaggcttcctt
cccatccctggaggcaatggcttttctcctggcgttgggggagctggtgtgggggccgga
ggacagggtcccatcatcactggactaacaattctgaaccagacaatagatatctgtaag
caccatgctaatctttgtttaaatggacgctgcatacctactgtttctagctaccggtgt
gaatgcaacatgggctataagcaggatgcaaatggagactgtatagatgttgatgaatgc
acatcaaatccctgcactaatggagattgtgttaacacacctggatcctattactgtaaa
tgtcacgctggattccagaggactcctacgaagcaagcatgtattgatattgatgagtgc
atccagaatggggttctttgtaaaaacggtcgatgtgtgaacacagatggaagtttccag
tgcatttgcaatgccggctttgaattaactacagatggaaaaaactgtgttgatcacgat
gaatgtacaactaccaacatgtgtttgaatgggatgtgcatcaatgaagatggcagcttc
aagtgcatctgcaaaccaggatttgtcttagctccaaacggacgttactgtactgacgtt
gatgaatgccagaccccaggaatctgcatgaatgggcactgcatcaacaacgaaggatcc
tttcgctgtgactgtcccccaggcctggctgtgggtgtggatggacgtgtatgtgtcgat
actcacatgcgcagtacctgctatggtggaatcaagaagggagtgtgtgtgcgtcctttc
cccggagccgtgaccaagtctgaatgctgctgtgccaatcctgactatggttttggagag
ccctgccagccatgccctgccaaaaattcagctgaattccatggcctttgtagtagcgga
gtaggaatcactgtggatggaagagatatcaatgagtgtgccttggatcctgatatatgt
gccaatggaatttgtgaaaacttacgtggtagttaccgttgtaattgcaacagtggctat
gaaccagatgcctccggaagaaactgcattgacattgatgagtgcttggtgaacaggctg
ctttgtgataatggactatgccgaaacacgccaggaagttacagctgcacgtgcccccct
ggctatgtgttccggacagagacagagacctgtgaagatataaatgaatgtgaaagcaac
ccatgtgtcaatggggcctgcaggaacaaccttggatctttcaattgtgaatgttcacct
ggcagcaaacttagctccacaggcttgatctgtattgacagcctgaaagggacgtgttgg
ctcaacatccaggacaaccgctgcgaagtgaatattaacggagccactctgaaatccgaa
tgctgtgctaccctgggagctgcctgggggagcccctgcgagcgctgtgaactagatgca
gcttgtgcaagaggctttgccaggattaaaggtgtcacttgtgaagacgttaatgagtgt
gaggtgtttcctggcgtttgtccaaatggacgctgtgtcaatagcaaagggtcttttcac
tgtgagtgccctgaaggccttacgttggatggaactggtcgtgtgtgtttggatatccgt
atggagcagtgctacctgaagtgggatgaagatgaatgcatccacccagttcctggaaag
ttccgcatggacgcctgctgctgtgctgtgggggcagcttggggcactgagtgtgaagag
tgccccaaacctggcaccaaggagtatgaggccctgtgcccccgggggcctggctttgct
aacagaggggatgttctcaccgggaggccattttacaaagatatcaatgaatgtaaagcc
tttcctgggatgtgcacctatggaaagtgcagaaatacaattggaagtttcaagtgccgt
tgcaatagtggcttcgctctggacatggaggaaaggaactgcacagacatcgacgagtgc
aggatctctcctgacctctgtggcagtgggatctgcgtcaatacgccgggcagctttgag
tgcgagtgcttcgaaggctacgaaagcggcttcatgatgatgaagaactgcatggacatt
gacgaatgtgaacgtaaccctctcctttgtaggggtggcacctgtgtgaacactgagggc
agctttcagtgtgactgtcccctgggacacgagctgtcaccatcacgcgaggactgtgta
gatatcaatgagtgctccttgagtgacaatctctgcagaaatggaaaatgtgtgaacatg
attggaacctatcagtgctcttgcaatcctggatatcaggccaccccagaccgccagggc
tgtacagacattgacgagtgcatgataatgaacgggggctgcgacacccagtgcactaat
tcagaaggaagctatgagtgcagctgcagcgagggctatgccctgatgccagacgggaga
tcctgtgcagatattgatgaatgcgaaaacaaccctgacatctgtgacggcggtcagtgt
accaacattcctggagagtatcgctgtctctgctatgatggcttcatggcttccatggac
atgaaaacctgcattgatgtgaatgaatgtgacttaaattcgaacatctgcatgtttggg
gagtgtgagaacaccaagggatcctttatttgccactgtcagctgggttattcagtgaag
aagggaaccacaggatgcacagatgtggacgagtgtgaaattggtgcccacaactgtgac
atgcatgcctcctgtctgaatgtcccaggaagcttcaaatgcagctgcagagaaggctgg
gtggggaatggcatcaaatgtattgatctagacgaatgttctaatggaacccaccagtgc
agcataaatgctcagtgtgtaaacaccccaggctcataccgatgtgcctgctccgaaggg
ttcactggagatggctttacctgctcagatgtcgatgagtgtgcagaaaacataaatctc
tgtgaaaatggacagtgcctcaacgtcccgggcgcgtatcgctgcgagtgtgagatgggc
ttcactccagcctcagacagcagatcctgccaagatattgatgaatgctccttccaaaat
atttgtgtctttggaacatgtaataatttgcctggaatgttccactgcatctgtgatgat
ggctatgaactggacagaaccggagggaactgcacagatattgatgagtgtgcagatccc
ataaattgtgtcaatggcctgtgtgttaacacacccggtcgctatgagtgtaactgtccg
ccagattttcaactaaatcccactggtgtgggttgtgttgacaaccgtgtgggcaattgc
tacctgaagtttggtcctcgaggagacgggagtctgtcctgcaacacagagattggagtg
ggcgtcagccgctcctcctgctgctgctctctgggaaaggcctggggaaacccctgtgag
acgtgcccgcctgtcaatagcactgaatattataccctgtgtcctggaggtgaaggcttt
agacctaaccccatcacaatcatcttggaagacattgacgaatgccaagagttgccaggt
ctttgccagggtggaaactgcatcaacacttttgggagctttcagtgcgagtgtccacaa
ggctactacctgagcgaggaaacccgcatctgtgaagatattgatgagtgttttgcacat
cctggtgtgtgtgggcctgggacctgctacaacaccctgggaaattacacctgcatttgc
ccacctgagtacatgcaggtcaatggaggccacaattgcatggacatgagaaaaagcttt
tgctaccgaagctacaatggaaccacttgtgaaaatgagttgccttttaatgtgacaaag
aggatgtgctgctgcacatacaatgttggcaaagcctggaacaaaccgtgcgaaccttgc
ccaacaccaggaacagctgactttaaaaccatatgtggaaatattcctggattcaccttt
gacattcacacaggaaaagctgttgacattgatgaatgtaaagagattccaggaatttgt
gcaaatggtgtgtgcattaaccagattggcagtttccgctgtgaatgccctacaggattc
agttacaatgacctgctcttggtctgtgaagacattgatgagtgcagtaatggtgacaat
ctctgccagcgaaatgcagactgcatcaacagtcccggcagctaccgctgcgaatgtgct
gcaggcttcaaactctcacccaatggggcctgtgtagatcgcaatgaatgtttagaaatt
cctaatgtttgcagtcatggcctgtgtgttgatttgcaaggaagttaccagtgcatctgc
cacaatggctttaaggcttctcaagaccagaccatgtgcatggatgttgatgagtgtgag
cggcacccatgtggaaacggaacttgcaaaaacactgttggatcctataattgtctgtgc
tacccaggctttgaactcactcacaataatgactgcctagacatagatgagtgcagttcc
tttttcggtcaagtgtgcaggaatggacggtgtttcaatgaaattggctccttcaagtgt
ttatgtaatgaaggttatgaacttactccagatggcaaaaactgtatagatactaatgag
tgtgttgcccttcctggctcttgttctcctgggacctgtcagaatttggagggatccttc
agatgcatctgtcccccagggtatgaagtaaaaagcgagaactgcattgatataaatgag
tgtgacgaagatcccaacatctgtctttttggttcctgtaccaacaccccagggagcttc
cagtgcatctgcccccctggctttgtactgtctgataatggacggagatgctttgatact
cgccagagtttctgcttcacaaattttgagaatgggaagtgttcagtacccaaagctttc
aacaccaccaaagcaaaatgctgctgcagtaagatgcccggagagggctggggtgacccc
tgtgagctgtgccccaaagatgatgaagttgcattccaggacttgtgtccatatggccat
ggaactgtccccagtcttcatgacacacgtgaagatgtcaatgagtgtcttgagagccca
ggcatttgttcaaatggtcagtgtatcaacactgacggatcttttcgctgtgaatgtcca
atgggctacaatcttgattacactggagtgcgctgtgtggatactgatgagtgttcaatc
ggcaacccatgtggaaacggtacatgtaccaatgttattgggagttttgaatgcaattgc
aatgaaggctttgagccaggacccatgatgaattgtgaagatatcaatgaatgtgcccag
aacccactgctttgtgctttccgctgcatgaacacctttggatcctatgaatgcacgtgc
ccagttggctatgccctcagggaggaccaaaagatgtgtaaagatctggatgagtgtgca
gaagggctgcatgactgtgaatccagaggcatgatgtgcaagaatctgattggcaccttc
atgtgcatctgcccccctggaatggcccgcaggcctgacggagaaggctgtgtagacgaa
aatgaatgcaggaccaaaccaggaatctgtgaaaatgggcgttgtgttaacataattgga
agctataggtgtgagtgtaatgaaggatttcagtcaagttcctcaggcactgaatgtctt
gacaatcgacagggactctgctttgcagaggtattgcagacaatgtgtcagatggcatcc
agcagccgcaatcttgtcacaaagtcagaatgctgctgtgatggtgggcgaggctggggc
caccagtgtgagctttgcccacttcctggaactgcccagtacaaaaagatttgtcctcat
ggcccaggatacactacagacggaagagatattgatgaatgtaaggtaatgccaaacctc
tgcaccaatggccagtgcatcaacaccatgggctccttccgatgcttctgcaaggttggc
tataccactgacatcagtgggacatcttgtgtagaccttgatgaatgttcccagtccccg
aaaccatgcaacttcatctgcaagaatgctgaagggagttatcagtgctcctgcccacgg
ggttacgtcctgcaagaggatgggaagacgtgcaaagacctcgatgaatgtcagaccaaa
cagcacaactgccagttcctctgtgtcaacaccctggggggttttacctgtaaatgtcca
cctggttttacccagcaccacactgcttgcattgataacaatgagtgtgggtctcagcct
tcactctgtggggcaaagggaatctgtcagaacacccctggaagtttcaactgtgaatgc
cagagaggattctctcttgatgccactggactgaactgcgaagatgttgatgaatgtgat
ggaaaccacaggtgccaacatggctgccagaacatcctgggaggctacaggtgtggctgc
cctcaaggatatattcagcattaccagtggaaccagtgtgtcgatgagaatgaatgctcc
aaccccaatgcctgtggctctgcttcctgctacaatactctggggagctacaagtgcgcc
tgcccctcagggttctcctttgaccagttctccagtgcctgccatgatgtgaatgagtgc
tcatcctccaagaacccctgcaattacggctgctccaacacggaagggggctacctctgt
ggctgcccacctggctactacagagtgggacagggccactgtgtctcaggaatgggattc
aacaaagggcagtacctgactctggacacagaggtggatgaagaaaatgctctgtcccca
gaaacatgctatgagtgcaaaatcaatggctactccaagaaagatggcaggcaaaagagg
agtatccaggaccccatgcccagcactgttgaacacatcagcctggagagtgtcgacatt
gacagccccatcaacatgaagttcaacctctctggctttggctctaaggagcacatcctg
gaactcatgcccgccatcgagcccctcaacaaccatatccgctatgtcatctcccaaggg
aatgatgatggcatcttccgcatccaccaaaggaatgggctcagctacttgcacacagcc
aagaagaagctcactcccggcacatacacactggaaatcactagcatccctctctacagg
aagaaggagcttaagaaactggaagagagcaatgaggatgactacctcctaggggagctt
ggggaggctctcagaatgaggctgcagattcaactctattaa
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integrated database retrieval system
