Sciurus carolinensis (gray squirrel): 124986795
Help
Entry
124986795 CDS
T08117
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 19 isoform X1
KO
K08633
a disintegrin and metalloproteinase with thrombospondin motifs 19 [EC:3.4.24.-]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ncar01002
]
124986795
Peptidases and inhibitors [BR:
ncar01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
124986795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_C
TSP_1
ADAMTS_spacer1
ADAMTS_CR_2
Reprolysin
TSP1_spondin
Reprolysin_5
Reprolysin_3
TSP1_CCN
Reprolysin_4
Reprolysin_2
Pep_M12B_propep
PLAC
ADAMTS_CR_3
Peptidase_M10
DUF3810
Motif
Other DBs
NCBI-GeneID:
124986795
NCBI-ProteinID:
XP_047411502
LinkDB
All DBs
Position
6:complement(110037982..110330375)
Genome browser
AA seq
1223 aa
AA seq
DB search
MRLTHICCCCLLYQLGFLSNEIVSGLQFVPDREEWEVVFPALWRPEPGDAAGGSGGSADP
GWLRGIGGGGGARAQTAGSSREVRSVAPAPLVEPVEGGSESQFRPPPSAGGEEDEELESQ
ELPRGSSGTAALPSGVPASWQPPPVPQPGPSPSPSPPPPPAQQAEQDGEEVLLRIPAFSR
DLYLLLRRDGRFLAPRFAVEQRPSPGPGPTGAAAPRPPAPPDAACFYTGAVLRHPGSLAS
FSTCGGGLMGFIQLNEDFIFIEPLNDTMAITGHPHRVYRQKRSMEEKATERSDLHSHYCG
IISDKGRPRSKKIAESGRGKRYSYKLPQEYNIETVVVADPAMVSYHGADAARRFILTILN
MVFNLFQHKSLGVQVNLRVIKLILLHETPADLYIGHHGEKMLESFCKWQHEEFGKKNDIH
LEMSTNWGEDLTSVDAAVLITRKDFCVHKDEPCDTVGIAYLNGMCSEKRKCIIAEDNGLN
LAFTIAHEMGHNMGINHDNDHPSCADGLHIMSGEWIKGQNLGDVSWSACSKEDLERFLRS
KASNCLLQTNPQSVNSVMVPSKLPGMTYTADEQCQILFGPLASFCQEMQHVICTGLWCKV
EGEKECKTKLDPPMDGTDCDPGKWCKAGECTSRTSAPEHLAGEWSVWSSCSRTCSAGTSS
RERTCPGLGSEPRDCNGPRKQYRICENPPCPAGLPGFRDWQCQAYSVRTSYPKHVLQWQA
VLDEEKPCALFCSPVGKEQPILLSEKVMDGTSCGYQGLDICANGRCQKVGCDGLLGSLAR
EDHCGVCNGNGKSCKIIKGDFNHTRGAGYIEVLVIPAGARRIKVVEEKPAHSYLGNLSYR
HRDDPTLRDSGKQSINSDWKIEHSGAFNLAGTTVHYVRRGLWEKISAKGPTTTPLHLLVL
LFQDQNYGLHYEYTVPSDPLPDNQSSKAPEPLFMWTHTGWEDCDATCGGGERKTTVSCTK
IMSKNISIVDNKKCKHLTKPEPQIRKCNEQPCQTRWMMTEWTTCSRTCGKGMQSRQVACT
QQLSNGTLIRARERDCTGPKPASTQRCEGQDCMTVWEAGVWSECSVKCGKGVRHRTVRCT
NPRKKCVLSTRPREAEDCEDYSKCYVWRMGDWSKCSITCGKGMQSRVIQCMHKITGRHGN
ECFSSEKPAAYRPCHLQPCNEKINVNTITSPRLAALTFKCLGDQWPVYCRVIREKNLCQD
MRWYQRCCETCRDFYAQKLQQKS
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgactcacatctgttgctgctgcctcctttatcagctggggttcctatcgaat
gagatcgtttcaggactgcagttcgtcccggaccgcgaggagtgggaagtcgtatttcct
gcactctggcgcccagagccgggggatgcagccggcggcagcgggggcagcgcggaccca
ggctggttgcgcggcatagggggcggcggaggcgcccgggcgcagactgcgggcagctca
cgcgaggtgcgctctgtggccccggcgccactggtagagcccgtggagggcgggtcggag
tcccagttccgacctccgccgtctgcagggggtgaggaggacgaggagctggaatcacag
gagttgccacggggatccagcggtactgccgccctgccctcgggagtcccggcctcgtgg
cagccgcctccggtcccgcagccagggccgtccccgtccccgtccccgcccccgccccca
gcccagcaagccgaacaagacggtgaggaggtgttgctgaggatcccggccttctcccgg
gacctgtacctgctgcttcggagagacggacgcttcctggctccgcgcttcgctgtggaa
cagcggccaagtccaggcccgggccccacgggggcagccgctccgcgccctcctgcacct
cccgatgcagcctgcttttacaccggggcggtgctgcggcacccgggctcgctggcctct
tttagcacctgtggaggtggcctgatgggatttattcagctcaatgaggacttcatattt
attgagccgctgaatgatacaatggccataacaggtcatccacatcgtgtatataggcag
aaaaggtccatggaagaaaaagccacagagaggtcagatcttcacagtcattactgtggt
atcatttcagataaaggaagacctaggtctaaaaaaatagcagaaagtggaagaggaaag
cggtattcatacaaattacctcaagaatacaacatagagactgtagtggttgcagatcca
gcaatggtttcctatcatggagcagatgcagccaggagattcattctaaccatcttaaat
atggtttttaaccttttccaacacaagagtcttggtgtgcaggtcaatcttcgtgtgata
aagcttattctgctccatgaaactccagcagatctgtatattgggcaccatggagagaaa
atgctagagagtttttgtaaatggcaacatgaagaatttggtaagaagaatgacatacat
ttagagatgtccaccaactggggggaagacttgacttcagtggatgcagctgtacttata
acaaggaaagatttctgtgtacataaagatgaaccctgtgacactgttggtatagcttac
ttgaatggaatgtgcagtgaaaagagaaagtgtatcattgctgaagacaatggtctgaat
cttgcatttacgattgctcatgaaatgggtcacaacatgggcattaatcatgacaatgac
cacccttcatgtgccgatggccttcatatcatgtctggtgaatggattaaaggacaaaat
cttggtgatgtttcatggtctgcatgtagcaaggaggatctggaaaggtttctcaggtcc
aaggccagtaactgtttgttacagacaaatccccagagtgtaaattctgtgatggtcccc
tctaagctgccagggatgacgtatactgcagatgagcaatgtcagattctctttgggccc
ttggcttctttttgtcaagagatgcagcatgtcatttgcacgggattatggtgcaaggta
gaaggtgagaaagaatgcaaaaccaaactcgatccaccaatggatgggacggactgtgac
cctggtaagtggtgtaaggctggagaatgtaccagcaggacctcagcacctgaacacctg
gctggagagtggagtgtgtggagttcctgtagccgaacctgcagtgctggaaccagcagt
cgagagcgcacgtgtcctgggctaggttctgaacctagggattgtaatggtcccagaaaa
caatacagaatatgtgagaatccaccttgtcctgcaggtttgcctggattcagagactgg
caatgtcaggcctatagtgttaggacttcatacccaaagcatgttcttcagtggcaagct
gttctggacgaagaaaaaccatgtgccttattttgctctcctgttggaaaagaacagcct
attcttctatcagaaaaagtgatggatggaacttcttgtggatatcagggattagatata
tgtgcaaatggcagatgtcagaaagtcggttgtgatggtttattagggtctcttgcaagg
gaagatcattgtggtgtctgcaatggcaatggaaaatcatgcaaaatcattaaaggggat
tttaatcacaccagaggagcaggttatatagaagtgttggtgatacctgctggagcaaga
agaatcaaagttgtggaggaaaagcctgcacatagctatttaggtaacctgagttacaga
cacagagacgatccaactctccgagattctgggaaacagtcaataaatagtgactggaag
attgaacattctggagcattcaatttagctggaactactgtccattacgtgagacgaggc
ctctgggagaagatctctgccaaaggtcctactacaacacctttacacctcctggtactt
ctatttcaagatcagaattatggtcttcactatgagtacactgtcccatcagaccccctt
ccagacaaccagagctctaaagcaccagagcccctcttcatgtggacacacacaggttgg
gaagactgcgatgccacgtgtggaggaggagaaaggaagacaacagtgtcctgcacaaaa
atcatgagcaagaatatcagcatcgtggacaacaagaaatgcaaacacttaaccaaacca
gaaccacagatacggaagtgcaatgagcagccatgtcaaacacgatggatgatgacggaa
tggaccacctgttcacgaacttgtggaaaaggcatgcagagcagacaggtggcctgtacc
cagcaactgagcaacggaactctcattagagcacgggagagagactgcactgggcctaaa
cctgcctctacccagcgctgtgagggacaggactgcatgaccgtgtgggaggcaggagtg
tggtccgagtgctctgtcaagtgtggcaaaggcgtacgtcaccgtactgtgagatgcact
aacccaagaaagaaatgtgtcctctctaccagacccagagaggctgaagactgtgaagat
tattcaaagtgctatgtgtggagaatgggtgactggtctaagtgctcaattacctgtggc
aaaggaatgcagtcccgagtcatccagtgcatgcataagatcacaggaagacatggaaat
gaatgtttttcttcagaaaagcctgcagcatataggccatgccaccttcagccctgcaat
gagaagattaatgtaaatacaataacatcacccagactagctgctctgactttcaagtgc
ttgggtgatcagtggcctgtgtactgccgagtgatccgtgagaagaacctttgtcaggac
atgcggtggtatcagcgctgctgtgagacgtgcagggacttctatgcccaaaagctacag
cagaagagttga
DBGET
integrated database retrieval system
