Sciurus carolinensis (gray squirrel): 124986810
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Entry
124986810 CDS
T08117
Name
(RefSeq) protein fem-1 homolog C
KO
K25805
protein fem-1 homolog A/C
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncar04121
]
124986810
Ubiquitin system [BR:
ncar04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
124986810
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GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Ank_KRIT1
ANK_LRRK2
TPR_12
TPR_NPHP3
TPR_10
TPR_2
Motif
Other DBs
NCBI-GeneID:
124986810
NCBI-ProteinID:
XP_047411528
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Position
6:124015236..124041510
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AA seq
617 aa
AA seq
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MDLKTAVFNAARDGKLRLLTKLLASKSKEEVSSLISEKTNGATPLLMAARYGHLDMVEFL
LEQCSASIEVGGSVNFDGETIEGAPPLWAASAAGHLKVVQSLLNHGASVNNTTLTNSTPL
RAACFDGHLEIVKYLVEHKADLEVSNRHGHTCLMISCYKGHKEIAQYLLEKGADVNRKSV
KGNTALHDCAESGSLDIMKMLLMYCAKMEKDGYGMTPLLSASVTGHTNIVDFLTHHAQTS
KTERINALELLGATFVDKKRDLLGALKYWKKAMNMRYSDRTNIISKPVPQTLIMAYDYAK
EVNSAEELEGLIADPDEMRMQALLIRERILGPSHPDTSYYIRYRGAVYADSGNFKRCINL
WKYALDMQQNNLDPLSPMTASSLLSFAELFSFMLQDRAKGLLGTTVTFDDLMGILCKSVL
EIERAIKQTQCPADPLQLNKALSIILHLICLLEKVPCTLEQDHFKKQTIYRFLKLHPRGK
NNFSPLHLAVDKNTTCVGRYPVCKFPSLQVTAILIECGADVNVRDSDDNSPLHIAALNNH
PDIMNLLIKSGAHFDATNLHKQTASDLLDEKEIAKNLIQPINHTTLQCLAARVIVNHRIY
YKGHIPEKLETFVSLHR
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggatctaaagacagcagtgtttaacgcagcgcgggatggcaaactccggcttcttacc
aaattgttggcaagcaaatctaaagaggaggtttcctccttgatctctgaaaaaacaaat
ggggccacgccactcttgatggctgccaggtatgggcatctcgacatggtggaatttctc
ctagagcaatgcagtgcctccatagaagtcgggggctctgtcaattttgatggcgaaacc
attgagggggctccccccttatgggcggcttctgcagccggacatctgaaggtggtccag
tctttgttaaatcatggagcatctgtcaacaacacgactctaaccaattcaactcctctt
cgagctgcatgttttgatggccacttggaaatagtgaagtaccttgtagaacacaaagct
gatttggaagtgtcaaaccggcatgggcatacctgcttgatgatttcatgttacaaagga
cataaagagattgctcagtatttacttgaaaagggggcagatgttaatagaaaaagtgtt
aaaggtaatactgcattgcatgattgtgcagaatctggaagtttggacatcatgaagatg
cttcttatgtattgtgcaaagatggaaaaagatggttatggaatgactccccttctctca
gcaagtgtgactggtcacacaaacattgtggattttctgacacaccatgcacagaccagc
aagacagaacgtattaatgctctagagcttctcggagctacatttgtagacaaaaaaaga
gatctcctgggggctttgaaatactggaaaaaggcaatgaacatgaggtacagtgatagg
actaatataattagtaaaccagtaccgcagacactaataatggcttatgattatgccaag
gaggtaaatagtgcagaagagctagaaggtcttattgctgatcctgatgagatgagaatg
caggcattgttaattagagaacgtattcttggtccctctcatcctgatacctcttactat
attagatatagaggcgctgtctatgcagactctggaaatttcaaacgatgcatcaaccta
tggaagtatgctttggatatgcaacagaacaatttggaccccttaagtcccatgaccgcc
agcagcttattatcttttgcagaactattctcctttatgctacaggatagggctaaaggc
ctgctgggtactactgttacgtttgatgatcttatgggtatactgtgcaagagcgtcctt
gaaatagagcgagctatcaaacaaactcaatgtccagctgacccattacaattaaataag
gctctttccatcattttgcacttaatttgcttgttagagaaagtaccttgtactctagaa
caggaccatttcaaaaagcagactatctataggtttcttaagctgcatccaaggggaaag
aataacttcagccctcttcatctggctgtggacaagaatactacatgtgtagggcggtac
cctgtttgtaaatttccatctctgcaagttactgcgatactgatagaatgtggtgctgat
gtgaatgtcagagactccgatgacaacagccccctacatatcgctgctttgaacaaccat
ccagacatcatgaatctccttattaaatcaggtgcacattttgatgccacaaacttgcac
aaacaaactgccagtgacttgctggacgagaaggaaatagctaagaatttgatccagccc
ataaatcataccacattacagtgtctggctgctcgtgtcatcgtgaatcatagaatatat
tataaagggcatattccagaaaagctagagacctttgtttcacttcatagatga
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