Sciurus carolinensis (gray squirrel): 124986829
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Entry
124986829 CDS
T08117
Name
(RefSeq) AP-3 complex subunit beta-1 isoform X1
KO
K12397
AP-3 complex subunit beta
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
124986829
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124986829
Membrane trafficking [BR:
ncar04131
]
Endosome - Lysosome transport
Others
AP-3 complex
124986829
Endosome - Golgi transport
124986829
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
AP3B1_C
SEEEED
AP3B1_C_2
Cnd1
HEAT_2
INTS1_R4
MOR2-PAG1_C
Motif
Other DBs
NCBI-GeneID:
124986829
NCBI-ProteinID:
XP_047411572
LinkDB
All DBs
Position
6:complement(63798382..64045017)
Genome browser
AA seq
1091 aa
AA seq
DB search
MSSNSFAYTEQSGGGETAELGQEATSTISPSGAFGLFSSDLKKNEDLKQMLESNKDSAKL
DAMKRIVGMIAKGKNASELFPAVVKNVASKNIEIKKLVYVYLVRYAEEQQDLALLSISTF
QRALKDPNQLIRASALRVLSSIRVPIIVPIMMLAIKEASADLSPYVRKNAAHAIQKLYSL
DPEQKEMLIEVIEKLLKDKSTLVAGSVVMAFEEVCPDRIDLIHKNYRKLCNLLVDVEEWG
QVVIIHMLTRYARTQFVSPWKEDDGLEDNEKNFYESDDEQKEKTEDRDRKKPYTMDPDHR
LLIRNTKPLLQSRNAAVVMAVAQLYWHISPKSEAGIISKSLVRLLRSNREVQYIVLQNIA
TMSIQRKGMFEPYLKSFYVRSTDPTMIKTLKLEILTNLANEANISTLLREFQTYVKSQDK
QFAAATIQTIGRCATNISDVTDTCLNGLVCLLSNRDEIVVAESVVVIKKLLQMQPAQHGE
IIKHMAKLLDSITVPVARASILWLIGENCERVPKIAPDVLRKMAKSFTSEDDLVKLQILN
LGAKLYLTNSKQTKLLTQYILNLGKYDQNYDIRDRTRFIRQLIVPNEKSGALSKYAKKIF
LAQKPAPLLESPFKDRDHFQLGTLSHTLNIKASGYLELSNWPEVAPDPSVRNVEVELAKE
WTPAGKAKKENPAKKFYSESEEEEDSSDSSSDSESESGSESGEGGKSEEEEDSSEDSSED
SSSEEESESGNESEAENKRTATRNSKNKGKSDIEDGKKKNEKSETSGSSDAESSSIESSS
DSESESESESESREATKEKGKKNKQDRNLSKDVSLLDLDDFNPVSTPVALPTPALSPSLI
ADLEGLNLSTSSSVISVSTPVFVPMKTHVLLHRMSGKGLAANYFFPRQPCIFGDKMVSVQ
IILNNTSDQKIENIHVGEKKLPIGMQMHVFHPIDSLEPEGSITVSMGIDFCDSTQTASFQ
LCTKDDCFNVNIQPPVGELLLPVAMSEKDFKKEQGMLTGMNETSAIIIAAPQNFTPSMVL
QKVVNVANVGAVPSGQDNIHRFAAKTVHSGSLMLVTVELKEGSTAQLIINTEKTVIGSVL
LRELKPVLSQG
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcaacagttttgcgtacactgagcagtccggaggaggggaaacggcggagctg
ggtcaggaggcgacctcgaccatttccccctccggcgcctttggcctctttagcagcgat
ttgaagaagaatgaagatctaaaacaaatgttggagagcaacaaagattcagctaaattg
gatgctatgaaacggattgttgggatgattgcaaaagggaaaaatgcatctgaactgttc
cctgctgttgtgaagaatgtggccagtaaaaatattgagatcaagaagttggtgtatgtt
tacctggtccgatatgctgaagagcagcaggatctggcactcttgtctataagcactttt
cagcgagctctgaaggacccaaatcaactaatccgtgcaagcgctttaagagttctgtca
agtattagagtgcctattattgttcctatcatgatgctcgctattaaggaagcttctgct
gacttatcaccatatgttaggaagaatgcagcccatgcaatacagaaactgtacagtctt
gatccagagcaaaaggaaatgttaattgaagtaattgaaaaacttttgaaagataagagc
acattggtagctggcagtgttgtgatggcttttgaagaagtatgcccagatagaatagat
ctgattcacaagaattaccgaaagctttgtaacttactagttgatgtggaagagtggggg
caggtggtcataatccacatgctaactcgatatgctcgtacacagtttgtcagtccttgg
aaagaggatgatggtctagaagacaatgaaaagaatttttatgaatccgatgatgaacag
aaggaaaagactgaagacagagacaggaagaagccatatactatggatccagaccataga
ctcttaattagaaatacaaagcctttacttcagagcaggaatgcagcggtggttatggca
gttgctcagttgtactggcacatatcgccaaaatcagaagctggcattatttctaaatca
ctagtgcgcttacttcgtagcaatagggaggtgcagtatattgtcctacaaaatatagca
actatgtcaattcaaagaaagggcatgtttgaaccttacctgaagagtttctatgttagg
tcaaccgatccaactatgatcaagacactgaagcttgaaattttgacaaacttagcaaat
gaagccaacatatcaactcttttacgggaatttcagacctacgtgaaaagtcaggataaa
caatttgcagcagccactattcagactataggcagatgtgcaaccaatatctcagacgtg
acagacacctgcctcaatggcctggtatgcctgctctccaacagggatgaaatagttgtt
gctgaaagtgtagttgttataaagaaattactacaaatgcaacctgcacaacatggagaa
attattaaacatatggccaagctcttggacagtatcactgttcctgtggctagagcaagt
attctttggctaattggagaaaactgtgagcgagttcctaaaattgcccctgatgttttg
agaaagatggctaaaagctttacaagtgaagacgatctcgtaaaactgcagattttaaat
ctgggagcaaaactgtatttaactaactccaaacagacaaaattgcttacccagtacata
ttaaatctcggcaagtatgatcaaaactacgacatcagagaccgtacaagatttattagg
cagcttattgttccgaatgagaagagtggagctttaagtaaatatgccaaaaaaatattc
ctagctcaaaaacctgcaccactgcttgagtctccttttaaagatagggatcatttccag
cttggcaccttatctcatactctcaacattaaagcttctgggtacctggaattatctaat
tggccagaggtggcgcctgacccttcagttagaaatgtagaagtagagttggcaaaagaa
tggaccccagcaggaaaagcaaagaaagaaaatcctgctaagaagttttactctgaatct
gaggaagaggaagactcttctgatagcagcagtgacagtgagagtgaatctggaagtgag
agtggagaaggaggcaaaagtgaagaggaagaagacagtagtgaagacagcagtgaggat
tcctctagtgaggaagaaagtgagagtggaaatgagtccgaagcagaaaacaaaagaaca
gccacgaggaactcaaaaaacaaagggaaaagtgatattgaagatgggaagaagaaaaat
gaaaaatctgaaacttcaggttcttccgatgctgaatctagttcaatagaaagttcttca
gattctgagtcagaatctgaaagtgaatctgaatccagagaagctactaaggagaaggga
aaaaaaaacaagcaagatagaaatctttccaaagatgtttcacttctggatctagatgat
tttaacccagtatccactccagttgcacttcccacaccagctctttctccaagcttgata
gctgatcttgaaggtttaaacttgtcaacttcttcatcagtcatcagtgtcagtactcct
gtcttcgtaccaatgaaaactcatgtgctgcttcatcgaatgagtggaaaaggactggct
gccaattatttctttccaagacaaccttgtatttttggtgataagatggtctctgtacaa
ataattctgaataatacttctgatcaaaagatagaaaatatccacgtaggggaaaaaaaa
cttcctataggcatgcaaatgcatgtttttcatccaatagactctctggagcctgaggga
tccattactgtttcaatgggtattgacttttgtgattctacacagactgccagtttccag
ttgtgcaccaaggatgattgcttcaatgttaatattcagccacctgttggagaactgctt
ttacctgtggccatgtcagaaaaagattttaagaaagagcaaggaatgctgacaggaatg
aatgaaacttctgctataattattgctgcaccccagaatttcactccatccatggtcctt
cagaaggttgtaaatgtagccaacgtcggtgcagtaccttctggccaagataatatacac
aggtttgcagctaaaactgtgcacagtgggtcattgatgctagtcacagtggaactgaag
gaaggctccacagcccagcttatcataaacactgagaaaactgtgattggttctgttctg
ctgcgggagctgaagcctgtcctgtcccaggggtaa
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