Sciurus carolinensis (gray squirrel): 124986832
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Entry
124986832 CDS
T08117
Name
(RefSeq) thrombospondin-4
KO
K04659
thrombospondin 2/3/4/5
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04145
Phagosome
ncar04151
PI3K-Akt signaling pathway
ncar04510
Focal adhesion
ncar04512
ECM-receptor interaction
ncar04820
Cytoskeleton in muscle cells
ncar05144
Malaria
ncar05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
124986832
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
124986832
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
124986832
09144 Cellular community - eukaryotes
04510 Focal adhesion
124986832
09142 Cell motility
04820 Cytoskeleton in muscle cells
124986832
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
124986832
09174 Infectious disease: parasitic
05144 Malaria
124986832
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124986832
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ncar04147
]
124986832
00536 Glycosaminoglycan binding proteins [BR:
ncar00536
]
124986832
Membrane trafficking [BR:
ncar04131
]
Endocytosis
Phagocytosis
Opsonins
124986832
Exosome [BR:
ncar04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
124986832
Exosomal proteins of colorectal cancer cells
124986832
Exosomal proteins of bladder cancer cells
124986832
Glycosaminoglycan binding proteins [BR:
ncar00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
124986832
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
COMP
EGF_3
EGF
cEGF
EGF_MSP1_1
DUF7630
Motif
Other DBs
NCBI-GeneID:
124986832
NCBI-ProteinID:
XP_047411584
LinkDB
All DBs
Position
6:65685942..65729913
Genome browser
AA seq
961 aa
AA seq
DB search
MLALRGAAFLLLHLVLQPWLRAGAQATPQVFDLLPSSSQRLNPSALQPVLTDPTLNELYV
ISTFKLQTKSSATIFGLYSSTDNSKYFEFTVMGRLNKAILRYLKNDGKIHLVVFNNLQLA
DGRRHRMLLRLTNLQRGAGSVELYLDCSQIDSVHNLPRAFSSLSQNPESIELRTFQRKAQ
DFLEELKLVVRGSLFQVASLQDCFLQQSEPLAATSTGDFNRQFLGQMAQLNQLLGEVKDL
LRQQVKETSFLRNTISECQACGPLSFQSPTPNTLVPPAPPAPPTRPTRRCDSNPCFRGVR
CTDTRDGFQCGPCPEGYTGNGITCSDIDECKYHPCYPGVRCVNLAPGFRCEACPVGFTGP
MVQGVGISFAKTNKQVCTDVDECLNGACVLNSICINTLGSYRCGPCKPGYTGDQTRGCKT
ERNCRNPELNPCSVNAQCIEERQGDVTCVCGVGWAGDGYVCGKDVDIDSYPDEELPCSSR
NCRKDNCKYVPNSGQEDADRDGIGDACDEDADGDGILNEQDNCVLTHNVDQRNSDKDIFG
DACDNCRTVLNNDQKDTDGDGRGDACDDDMDGDGIKNILDNCPKAPNRDQRDKDGDGVGD
ACDSCPDVSNPNQSDVDNDLVGDSCDTNQDSDGDGHQDSTDNCPTVINSAQLDTDKDGIG
DECDDDDDNDGIPDLVPPGPDNCRLVPNPGQEDSNSDGVGDICETDFDQDQVIDRIDVCP
ENAEITLTDFRAYQTVVLDPEGDAQIDPNWVVLNQGMEIVQTMNSDPGLAVGYTAFNGVD
FEGTFHVNTQTDDDYAGFIFGYQDSSSFYVVMWKQTEQTYWQATPFRAVAEPGIQLKAVK
SKTGPGEHLRNSLWHTGDTSDQVRLLWKDSRNVGWKDKVSYRWFLQHRPQVGYIRVRFYE
GSELVADSGVTIDTTMRGGRLGVFCFSQENIIWSNLKYRCNDTIPEDFQEFQTQIFDRLD
N
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgctggccctgcgcggagccgccttcctcctgctgcacctggtcctgcagccgtggctg
agagccggcgcccaggccacccctcaggtctttgaccttctcccatcctccagtcagaga
ctgaacccaagcgctctgcaaccagtcctgacagatcccaccctgaatgagctctatgtg
atctccaccttcaagctacagactaaaagctcagctaccatcttcggcctctattcctca
actgacaacagcaaatattttgaatttactgtgatggggcgtttaaacaaagccatcctc
cgttacctgaagaatgatgggaagatccatttggtggttttcaataacctacaactggca
gacgggaggcggcacaggatgctcctgaggctgaccaatttgcaacgaggggctggctct
gtggagctctacctggactgttcccaaatagattcagttcacaatctccccagagccttt
tccagcctctctcagaatcctgaatccattgaattgaggactttccagaggaaggcacag
gacttcttggaagaactgaagctggtggtaagaggctcactgttccaggtggccagcctg
caagactgcttcctgcagcagagtgagccactggcagccacaagcacaggagactttaat
cgtcagttcttgggtcaaatggcacaactaaaccaacttctgggagaagtgaaggatctt
ctgagacagcaggtcaaggaaacatcatttttgagaaacaccatctccgaatgccaggct
tgtggtcctctcagctttcagtctccaaccccaaacacactggtgcccccggcacccccg
gctcccccaacacgcccaacacgccgctgtgactccaacccatgtttccgaggtgttcga
tgtactgacactagagatggcttccagtgcgggccctgccctgagggctacacggggaac
gggatcacctgctctgatattgatgagtgcaaataccatccctgctacccaggtgtccgc
tgtgtgaacttggctcctggcttcagatgtgaggcctgccctgtgggcttcacagggccc
atggtacagggtgttgggatcagttttgccaagacaaacaagcaggtgtgcactgatgtt
gacgagtgtctgaatggagcgtgtgttctgaattccatctgtatcaacacgttgggatct
taccgctgtgggccttgcaaaccagggtacactggtgaccagacaaggggatgcaaaacc
gaaagaaactgcagaaatccagaactgaacccttgtagtgtgaatgcacagtgcattgaa
gagaggcagggggatgtgacatgtgtgtgcggagtcgggtgggctggtgatggctatgtc
tgtggaaaggatgtggacatcgacagttaccctgatgaagaactgccatgctcttccagg
aactgcaggaaggacaactgcaagtatgtgccaaactctggccaggaagatgcagacaga
gatggcattggagatgcttgtgatgaggatgctgatggagatgggatcctgaatgagcag
gataactgtgtcttgactcacaatgtggaccaaaggaacagtgataaagatatctttggt
gatgcctgtgacaactgccgaaccgtcttaaataatgaccagaaagacacagatggggat
ggaagaggagatgcctgtgacgacgacatggatggagatggaataaaaaacattttggac
aactgccccaaagctcccaatcgtgaccagagggacaaggacggtgacggtgtgggggat
gcttgtgatagctgtcctgatgtcagcaaccctaaccagtctgatgtggataatgatttg
gttggggactcctgtgacaccaatcaggacagtgatggagatggccaccaggacagcaca
gacaactgccccaccgtcattaacagtgcccagctggacactgataaggatggaattggg
gatgaatgtgatgacgacgatgacaatgatggcatcccagacctggtgcccccaggacca
gacaactgccggctggtccctaacccaggccaggaggatagcaacagtgacggggtggga
gacatctgcgagaccgactttgaccaggaccaagtcattgaccggattgacgtctgccct
gagaatgcagaaatcaccctgacagacttcagagcctaccagaccgtggtcctggaccct
gaaggagatgcccagatcgaccccaactgggtggtcctgaaccagggcatggagattgtg
cagaccatgaacagcgatcctggcctggctgtggggtacacagcttttaacggtgttgac
ttcgaagggaccttccatgtaaacacccagacggatgatgactatgcaggctttatcttt
ggttaccaagatagctccagcttctatgtggtcatgtggaagcagacggagcagacgtac
tggcaagccacacccttccgagccgtcgcagaacctggcatccagctcaaggctgtaaag
tctaagacgggcccaggagaacatctccggaactccctgtggcacacaggagacaccagc
gaccaggtcaggctgctgtggaaggactccaggaacgtggggtggaaggacaaggtgtcc
tatcgctggttcctgcagcacagaccccaggtggggtacatcagggtgcgattttatgaa
ggctctgagttggtggctgactctggggtcaccatagacaccaccatgcgtgggggccga
cttggcgtgttttgcttctctcaagaaaacatcatctggtccaatctcaagtatcgctgc
aatgacaccatcccagaggacttccaggagtttcaaacccagatttttgatcgcttggat
aattaa
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