Sciurus carolinensis (gray squirrel): 124986838
Help
Entry
124986838 CDS
T08117
Name
(RefSeq) protocadherin alpha-8-like
KO
K16493
protocadherin alpha
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
124986838
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ncar03036
]
124986838
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ncar04515
]
124986838
Chromosome and associated proteins [BR:
ncar03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
124986838
Cell adhesion molecules [BR:
ncar04515
]
Cadherins
Protocadherins
124986838
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_FAT4_N
Ig_Cad99C_N
Ig_CLSTN
Cadherin_C_2
Ig_BT4661_3rd
Motif
Other DBs
NCBI-GeneID:
124986838
NCBI-ProteinID:
XP_047411600
LinkDB
All DBs
Position
6:99114175..>99116601
Genome browser
AA seq
809 aa
AA seq
DB search
MEFSWRGNPESGHLLLSILLLSVWKATCSRQIHYSVPEEAKHGTFVGRIAQDLGLELEEL
VPRLFRVVPKDNGDLLEVNLQNGILFVNSRIDREELCGQSAECSIHLEVIVDRPLQVFHV
EVEVKDINDNPPAFPVKEQKLFVSESRPLDSRFPLEGASDADIGANSALTYKLNSNDYFI
LSVNLKNEENKQVELVLRKSLDREDAPEHNLLLIATDGGKPELTGSVQLLVTVLDVNDNA
PSFERSEYEVRLLENSDRGTTVVRLNASDRDEGTNGAISYSFNSLVPPMVTDQFSLDANT
GEITIQGSLDFEQVNVYKLRIDATDKGHPPMVGHCTVLVRVLDENDNVPQIAMTSLSLPV
REDAQFGTVIALISVSDRDSGANGQVTCSLTPHVPFKLISTFKNYYSLVLDSALDRESTS
DYELVVTARDGGSPSLWATASLLVEVADVNDNAPVFAQPEYTVFVKENNPPGCHIFTVSA
RDADAQENALVSYSLVERRVGERALSSYVSVHAESGKVYALQPLDHEELEMLQFQVSARD
AGVPPLGSNVTLQVFVLDENDNAPILLGPWTQGAGGSVNELVQWSVGVGHVVAKVRAVDA
DSGYNAWLSYELLPAAGGTRSPFRVGLYTGEISTTRALDEADAPRQSLLILVKDHGEPSL
TATVTVLISLVESWQAPKASSRTLAGAVGQETAVVSVNVYLIIAICAVSSLLVLTLLLYT
ALRCSAGPTEGECVSGKPMLVCSSAVGSWSYSQKRRQRVCSGEVQPKTDLMAFSPNLPQC
PESVDVHEQQDLNVDHCIQVSAYIFRNFK
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atggaattttcttggcgaggaaacccggaatccgggcatctgctgctctcgattttactg
ctctctgtctggaaggctacatgtagtagacagatccactactccgtacccgaggaggcc
aaacacggcacctttgtgggacgcatcgcacaggacctggggctggaactggaagagttg
gtgccccgcctgttccgggtggtgcccaaggacaacggagaccttctggaggtaaatcta
cagaatggcattttgtttgtgaattctcggatcgaccgggaggagctgtgcgggcagagc
gcggagtgtagcatccacttagaggtgatcgtggacagaccgctgcaggttttccatgtg
gaggtggaggtgaaggacattaacgacaaccctcctgcattcccagtaaaggaacaaaag
ctgtttgtttcagaatccaggccgcttgactctcggtttccactagagggcgcgtcggat
gcagatattggagcgaactcagctttaacctacaagcttaactctaatgattatttcata
ctaagcgtgaatttaaagaacgaggagaataaacaggttgagctagtattaagaaaatcc
ttggacagagaggatgctcctgaacataatttactcctgatagccaccgatggaggcaaa
cctgagctcacaggctctgttcaactgctggtcaccgtgctggatgtgaatgataatgct
cctagttttgaaagatctgaatatgaagtgagactattggaaaactcagacagaggaact
acagttgtgagactgaatgcttctgatcgggatgaaggaacgaatggggcaatttcatac
tcttttaatagtcttgttccacccatggttactgaccagtttagtttagatgcaaacact
ggagaaataacaattcaagggagcttggattttgaacaagtaaatgtatacaaactccgc
attgacgcgacagacaaaggccaccctccaatggtgggccattgcaccgttttagtgaga
gttttggatgaaaatgataatgttcctcagattgcaatgacgtccttatcattgcctgtc
cgggaggacgcacagttcggtaccgtcattgccctgatcagcgtgtcagatcgtgactct
ggagccaacggacaggtgacctgttccctgacgcctcatgtccccttcaagctgatatcc
actttcaagaactactactcgctggtgctggatagcgccttggaccgcgagagcacatct
gactatgagttggtggtgaccgcaagggacgggggctcgccttcgctgtgggccactgcc
agcttgttggtggaggtggcggatgtgaacgacaacgcgccagtgttcgcgcagcccgag
tacacggtgttcgtgaaggagaacaacccgccaggctgccacatcttcacggtgtccgcg
cgtgacgcggatgcgcaggagaacgcgctggtgtcctactctctggtggagcggcgtgtg
ggcgagcgtgcgctgtcgagctacgtgtcggtgcacgcggagagcggcaaggtgtatgca
ctgcagcctctggaccacgaagagcttgagatgctgcagtttcaggtgagcgcacgcgac
gccggcgtgccgcccctgggcagcaatgtgactctgcaagtattcgtgcttgatgagaat
gacaacgcacccatactattgggaccttggacacaaggagcaggtggctcagtgaatgaa
ttggtgcagtggtcggttggtgtgggccacgtggtggcgaaggtgcgagcagtggacgct
gactcagggtacaatgcttggctgtcctatgaattgctgccagcggcaggtggcacacgc
agcccgtttcgagtagggctgtacactggcgagatcagcaccacgcgtgctctggatgag
gcagatgccccgcgccagagtctgctgattctggtgaaggaccatggagagccgtcgctg
actgccactgtcacagtgctgatatctctagtggaaagctggcaagcccccaaagcctct
tctaggactttagcgggtgctgtgggtcaggaaacggcagtggtgagtgtgaacgtgtac
ttgatcatcgccatctgcgctgtgtccagtctgttggtgctcacgctgctgctgtacaca
gctctgcggtgctcggcagggcccactgagggcgagtgcgtgtctgggaagcccatgctg
gtgtgctccagcgcggtggggagctggtcttattcacaaaagaggaggcagagggtgtgc
tctggagaggtccaacccaagacagacctcatggccttcagccccaatcttccacaatgt
ccagaatcagtcgatgtgcatgaacagcaagatttaaacgttgatcattgtattcaagta
agtgcctatatatttagaaattttaaa
DBGET
integrated database retrieval system
