Sciurus carolinensis (gray squirrel): 124986851
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Entry
124986851 CDS
T08117
Name
(RefSeq) nibrin-like isoform X1
KO
K10867
nibrin
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar03440
Homologous recombination
ncar04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
124986851
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
124986851
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ncar03032
]
124986851
03400 DNA repair and recombination proteins [BR:
ncar03400
]
124986851
DNA replication proteins [BR:
ncar03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
124986851
DNA repair and recombination proteins [BR:
ncar03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
124986851
BRCA1-C complex
124986851
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nbs1_C
NIBRIN_BRCT_II
FHA
RTT107_BRCT_5
BRCT
Yop-YscD_cpl
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
124986851
NCBI-ProteinID:
XP_047411621
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All DBs
Position
1:47538392..47573318
Genome browser
AA seq
746 aa
AA seq
DB search
MWKLVPAAGPAPGEPYRLLTGVEYIIGRKNCAILIEEDQSISRNHAVLTANFSVTNLSQT
DEIPTLTIKDNSKYGTFINEEKMQNGLSRTLKTGDRVTFGVFESKFRVEYEPLVACSSCL
DVSGKTALNQAILQLGGLTVNNWTEECTHLVMISVKVTIKTICALICGRPIVKPEYFIEF
LKAVQSKKQPPQIESFYPPIDEPTIGSKNIDLSGRQERKQIFKGKTFVFLSAKQHKKLSS
AVIFGGGEARLITEENEEEDSFFSAPGICVVDIGITNTQILIPDSQKKWVHSIMDMLQRQ
GLRPIPEAEIGLAVIFMTTENYCDPQGQPNIGLKTTTPGPSLSQGLSVNKKLMPRASMNT
TTCVADTESEQTDTCMFLSENSKEISISRMEQKETVQEPSKTSFSNNNIVSNTLVRTKVP
NYQLSPTKFPGVNKSRDQSSQQQQTNSIKNYFQPSAKKRERDEENQEMSSSKSARIEMSC
SLLEQTQPATHSLWKNKAENLSQNEPVDQKSNNLFIDDEDLESSVKNSSDKSLSSENLRS
IKRKEIDDLSIEDEISKELFKNMKPELEIEVKVQKQEEEFNIRKKPRMEIETNINPNNET
IPESSKISQENEIGKKHELNKESLWSTKEENSDDFQDKSEMLPRKVLLTEFRSLVVNNST
CRNPCVVNNDYGQIKNFKKFKKVTFPGAGKLPHIIGGSDLIAHHARKNTELEDWLRQEME
VQQKHAKEESMADDLFRYNPNVKRRR
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atgtggaagctggttcccgccgcgggccctgccccaggagaaccatacagacttttgact
ggtgttgagtacattattggaagaaaaaactgtgccattttaattgaagaggatcagtca
atcagtcggaaccatgctgtgttaacagctaacttttctgtaaccaacctgagtcaaaca
gatgaaatccctacattaacaataaaagataattctaagtatggtacctttattaatgaa
gaaaaaatgcagaatggcctttctcgaactttgaagacaggggatagagttacctttgga
gtatttgaaagtaaattcagagtagaatatgaacctttggttgcatgctcttcttgttta
gatgtctctgggaaaactgctttaaatcaagctatattgcaacttggaggacttactgta
aacaactggacagaagaatgtactcaccttgttatgatatcagttaaagttaccattaaa
acaatatgtgcactcatttgtggacggccaattgtaaagccagagtattttattgaattt
ctcaaagcagttcagtccaagaaacagcctccacaaattgaaagtttttacccacctatt
gatgaaccaactattggaagtaaaaatattgatctatcaggacgacaggagagaaaacaa
atcttcaaaggaaaaacatttgtatttttaagtgccaaacagcataagaaattaagttca
gcagtcatttttggaggtggagaagctaggttgataacagaagaaaatgaagaagaagat
agtttcttttcagctcctggaatttgtgttgttgatataggaataacaaatacacagatc
ttaattcctgactctcagaaaaaatgggtccattcaattatggatatgctccaaaggcaa
ggtcttagacctattcctgaagcagaaattggattggcagttattttcatgactacagag
aattactgtgatcctcagggccagcccaatataggattaaagacgacaactccaggaccc
agcctttcacaaggtttatcagtcaataaaaaactaatgccaagggcttccatgaatact
acaacatgtgtagctgacacagaatcagaacaaacagatacatgtatgtttttgagtgaa
aattcaaaagaaataagtatctccaggatggaacaaaaagaaactgtacaggaaccctcc
aaaacaagcttcagtaataacaacatagtatcaaatactttggttaggacaaaagttcca
aactatcagctttcaccaaccaaattcccaggtgtaaataaaagtagagatcagtcttct
caacagcagcagacaaactccatcaaaaactactttcaaccatctgccaaaaaaagggaa
agggatgaagaaaatcaagaaatgtcttcatccaaatcagcaagaatagaaatgtcttgt
tctcttttagaacaaacacaacctgctacacactcactatggaaaaataaggcagaaaat
ctatctcagaatgaacctgtggaccaaaaatcaaataacttatttatagatgatgaagat
ttagaatccagtgtgaaaaattcttctgataaatctctttcttcagaaaaccttagatca
ataaaaagaaaagaaatagatgatttgtccatagaagatgaaatatcaaaagagttattc
aagaatatgaaacctgagttagaaattgaagtgaaagttcaaaaacaagaggaagagttc
aatataagaaagaagccaaggatggaaatagaaacaaatattaatcctaataatgaaaca
ataccagaaagtagcaaaatatctcaagaaaatgaaattgggaagaaacatgagctcaac
aaagaatcactgtggtcaactaaagaagagaacagtgatgactttcaggacaaaagtgag
atgcttccaagaaaggtgttactgactgaatttagatcactggtggttaataactccact
tgcagaaatccatgtgtggtaaataatgattatggtcaaataaagaatttcaagaaattc
aaaaaggtcacatttcctggagcaggaaagcttccacatatcattggaggatcagatctg
atagctcaccatgctcgaaagaatacagaattagaagattggctgaggcaggaaatggag
gtacaacaaaaacatgcaaaagaagaatctatggctgatgatctctttaggtacaatcct
aatgtaaaaaggagaagataa
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