KEGG   Sciurus carolinensis (gray squirrel): 124986851
Entry
124986851         CDS       T08117                                 
Name
(RefSeq) nibrin-like isoform X1
  KO
K10867  nibrin
Organism
ncar  Sciurus carolinensis (gray squirrel)
Pathway
ncar03440  Homologous recombination
ncar04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    124986851
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    124986851
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ncar03032]
    124986851
   03400 DNA repair and recombination proteins [BR:ncar03400]
    124986851
DNA replication proteins [BR:ncar03032]
 Eukaryotic type
  DNA Replication Termination Factors
   MRN complex
    124986851
DNA repair and recombination proteins [BR:ncar03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    MRN(MRX) complex
     124986851
    BRCA1-C complex
     124986851
SSDB
Motif
Pfam: Nbs1_C NIBRIN_BRCT_II FHA RTT107_BRCT_5 BRCT Yop-YscD_cpl PTCB-BRCT
Other DBs
NCBI-GeneID: 124986851
NCBI-ProteinID: XP_047411621
LinkDB
Position
1:47538392..47573318
AA seq 746 aa
MWKLVPAAGPAPGEPYRLLTGVEYIIGRKNCAILIEEDQSISRNHAVLTANFSVTNLSQT
DEIPTLTIKDNSKYGTFINEEKMQNGLSRTLKTGDRVTFGVFESKFRVEYEPLVACSSCL
DVSGKTALNQAILQLGGLTVNNWTEECTHLVMISVKVTIKTICALICGRPIVKPEYFIEF
LKAVQSKKQPPQIESFYPPIDEPTIGSKNIDLSGRQERKQIFKGKTFVFLSAKQHKKLSS
AVIFGGGEARLITEENEEEDSFFSAPGICVVDIGITNTQILIPDSQKKWVHSIMDMLQRQ
GLRPIPEAEIGLAVIFMTTENYCDPQGQPNIGLKTTTPGPSLSQGLSVNKKLMPRASMNT
TTCVADTESEQTDTCMFLSENSKEISISRMEQKETVQEPSKTSFSNNNIVSNTLVRTKVP
NYQLSPTKFPGVNKSRDQSSQQQQTNSIKNYFQPSAKKRERDEENQEMSSSKSARIEMSC
SLLEQTQPATHSLWKNKAENLSQNEPVDQKSNNLFIDDEDLESSVKNSSDKSLSSENLRS
IKRKEIDDLSIEDEISKELFKNMKPELEIEVKVQKQEEEFNIRKKPRMEIETNINPNNET
IPESSKISQENEIGKKHELNKESLWSTKEENSDDFQDKSEMLPRKVLLTEFRSLVVNNST
CRNPCVVNNDYGQIKNFKKFKKVTFPGAGKLPHIIGGSDLIAHHARKNTELEDWLRQEME
VQQKHAKEESMADDLFRYNPNVKRRR
NT seq 2241 nt   +upstreamnt  +downstreamnt
atgtggaagctggttcccgccgcgggccctgccccaggagaaccatacagacttttgact
ggtgttgagtacattattggaagaaaaaactgtgccattttaattgaagaggatcagtca
atcagtcggaaccatgctgtgttaacagctaacttttctgtaaccaacctgagtcaaaca
gatgaaatccctacattaacaataaaagataattctaagtatggtacctttattaatgaa
gaaaaaatgcagaatggcctttctcgaactttgaagacaggggatagagttacctttgga
gtatttgaaagtaaattcagagtagaatatgaacctttggttgcatgctcttcttgttta
gatgtctctgggaaaactgctttaaatcaagctatattgcaacttggaggacttactgta
aacaactggacagaagaatgtactcaccttgttatgatatcagttaaagttaccattaaa
acaatatgtgcactcatttgtggacggccaattgtaaagccagagtattttattgaattt
ctcaaagcagttcagtccaagaaacagcctccacaaattgaaagtttttacccacctatt
gatgaaccaactattggaagtaaaaatattgatctatcaggacgacaggagagaaaacaa
atcttcaaaggaaaaacatttgtatttttaagtgccaaacagcataagaaattaagttca
gcagtcatttttggaggtggagaagctaggttgataacagaagaaaatgaagaagaagat
agtttcttttcagctcctggaatttgtgttgttgatataggaataacaaatacacagatc
ttaattcctgactctcagaaaaaatgggtccattcaattatggatatgctccaaaggcaa
ggtcttagacctattcctgaagcagaaattggattggcagttattttcatgactacagag
aattactgtgatcctcagggccagcccaatataggattaaagacgacaactccaggaccc
agcctttcacaaggtttatcagtcaataaaaaactaatgccaagggcttccatgaatact
acaacatgtgtagctgacacagaatcagaacaaacagatacatgtatgtttttgagtgaa
aattcaaaagaaataagtatctccaggatggaacaaaaagaaactgtacaggaaccctcc
aaaacaagcttcagtaataacaacatagtatcaaatactttggttaggacaaaagttcca
aactatcagctttcaccaaccaaattcccaggtgtaaataaaagtagagatcagtcttct
caacagcagcagacaaactccatcaaaaactactttcaaccatctgccaaaaaaagggaa
agggatgaagaaaatcaagaaatgtcttcatccaaatcagcaagaatagaaatgtcttgt
tctcttttagaacaaacacaacctgctacacactcactatggaaaaataaggcagaaaat
ctatctcagaatgaacctgtggaccaaaaatcaaataacttatttatagatgatgaagat
ttagaatccagtgtgaaaaattcttctgataaatctctttcttcagaaaaccttagatca
ataaaaagaaaagaaatagatgatttgtccatagaagatgaaatatcaaaagagttattc
aagaatatgaaacctgagttagaaattgaagtgaaagttcaaaaacaagaggaagagttc
aatataagaaagaagccaaggatggaaatagaaacaaatattaatcctaataatgaaaca
ataccagaaagtagcaaaatatctcaagaaaatgaaattgggaagaaacatgagctcaac
aaagaatcactgtggtcaactaaagaagagaacagtgatgactttcaggacaaaagtgag
atgcttccaagaaaggtgttactgactgaatttagatcactggtggttaataactccact
tgcagaaatccatgtgtggtaaataatgattatggtcaaataaagaatttcaagaaattc
aaaaaggtcacatttcctggagcaggaaagcttccacatatcattggaggatcagatctg
atagctcaccatgctcgaaagaatacagaattagaagattggctgaggcaggaaatggag
gtacaacaaaaacatgcaaaagaagaatctatggctgatgatctctttaggtacaatcct
aatgtaaaaaggagaagataa

DBGET integrated database retrieval system