Sciurus carolinensis (gray squirrel): 124986864
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Entry
124986864 CDS
T08117
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM41 isoform X1
KO
K12017
tripartite motif-containing protein 41 [EC:
2.3.2.27
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncar04121
]
124986864
Enzymes [BR:
ncar01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124986864
Ubiquitin system [BR:
ncar04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
124986864
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRY
SPRY
zf-C3HC4_4
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
RING_XB3-XBAT31
zf-C3HC4_3
zf-RING_2
Apolipoprotein
zf-RING_5
zf-RING_6
TRIM_CC
ALIX_LYPXL_bnd
DUF2937
Motif
Other DBs
NCBI-GeneID:
124986864
NCBI-ProteinID:
XP_047411639
LinkDB
All DBs
Position
6:complement(132306915..132318467)
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AA seq
628 aa
AA seq
DB search
MAAVAMTPNPVQTLQEEAVCAICLDYFTDPVSIGCGHNFCRVCVTQLWGGEDEEDRDELD
REEEEEDGEEEEVEAVGAGGGWDTPMRDEDYEGDMEEEVEEEEEGVFWTGGMGGSNWDNM
DYVWEEEDEEEDLHYYLGDMEDLRGEDEEDEEEVLEEDEEEELDPVTPLPPPPAPRRCFT
CPQCRKSFPRRSFRPNLQLANMVQVIRQMHPTPGRGSRVNEQGICPKHQEALKLFCEVDE
EAICVVCRESRSHKQHSVVPLEEVVQEYKTKLQGHVEPLRKHLEAVQKMKAKEERRVTEL
KSQMKAELAAVASEFGRLTRFLAEEQAGLERRLREMHEAQLERAGTVASRLAEQAAQLSR
LLAEAQERSQQGGLRLLQDIKETFNRCEEVQLQPPEIWSPDPCQPHSHDFLTDAIVRKMS
RMFCQAARVDLTLDPDTAHPALMLSPDRRGVRLAERRQEVADHPKRFSADCCVLGAQGFR
SGRHYWEVEVGGRRGWAVGAARESTHHKEKVGSGGSSLGSGDASSSRHHHRRRRLHLPQQ
PLLQREVWCVGTNGKRYQAQSSTEQTLLSPSEKPRRFGVYLDYEAGRLGFYNAETLAHVH
TFSAAFLGERVFPFFRVLSKGTRIKLCP
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgttgccatgacacccaaccctgtgcagacccttcaggaggaggcggtgtgc
gccatctgcctcgattacttcacggacccggtgtccatcggctgcgggcacaacttctgc
cgagtgtgtgtaacccagttgtggggtggggaggatgaggaggacagggatgagttggac
cgggaggaggaggaggaggacggagaggaggaggaagtggaggctgtgggggccggcggg
gggtgggacacccccatgcgggacgaagattatgagggcgacatggaggaggaggtcgag
gaggaagaggagggtgtgttctggaccggtggcatgggtgggtccaactgggacaacatg
gactacgtgtgggaggaggaggacgaggaggaagacctgcactactatttgggggacatg
gaggacctgaggggggaggacgaggaggatgaggaggaagtgctggaggaggacgaggaa
gaggagctagaccccgtcaccccactgcccccgcctccagcccctcggaggtgcttcacc
tgtccccagtgccgaaagagctttcctcggcggagcttccgccccaacctgcagctggcc
aacatggttcaggtgattcggcagatgcacccaacccctggtcgagggagccgtgtgaat
gagcagggcatctgtcccaaacaccaagaagctctgaagttgttctgcgaggtggatgaa
gaagctatctgtgtggtgtgccgagaatctaggagccacaaacagcacagcgtggtccca
ctggaggaggtggtacaggagtacaagaccaaactgcaggggcatgtggaacctcttagg
aagcacctggaggctgtgcaaaagatgaaggccaaggaggagaggcgggtgacagagcta
aagagccagatgaaggcagagctggcagctgtggcctcagagtttgggcgactcacacgg
tttctggctgaagagcaggcagggcttgaacggcgcctccgagagatgcatgaagctcag
ttggaacgtgctggaacagtggccagccgccttgccgaacaggctgcccagctgagccgc
ctgctggctgaggctcaggagcggagtcagcaggggggcctgagactgctacaggacatc
aaggagactttcaataggtgtgaagaggtacagctgcagcccccagagatctggtcccct
gacccgtgccaaccccatagccatgacttcctgacagatgccatcgtgaggaaaatgagc
cggatgttctgtcaggctgcgagagtggacctgacgctggatcctgacacggctcaccca
gccctgatgctgtcccctgaccgccggggggtccgcctggcagaacggcggcaagaggtt
gctgaccatcccaagcgcttctcggctgactgctgcgtactgggggcccagggcttccgc
tctggtcggcactactgggaggtagaggtgggcgggcggcggggctgggcggtgggtgct
gcccgtgaatcaacccatcataaagaaaaggtgggctccggggggtcctctctgggcagc
ggggatgccagctcctcacgccatcaccatcgccgtcgccggctccatctgccccagcag
cccctgctccagcgggaagtgtggtgtgtgggcaccaacggcaaacgctaccaggcacag
agctcaacagagcagacactgctgagtccaagtgagaaaccacggcgctttggtgtatac
ctggactatgaggccgggcgcctgggcttctacaatgcggagactctagcccacgtacat
acgttctcagctgcctttctgggcgagcgtgtcttccctttcttccgggtgctatccaag
ggcacccgcatcaagctttgtccttga
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