KEGG   Sciurus carolinensis (gray squirrel): 124986882
Entry
124986882         CDS       T08117                                 
Name
(RefSeq) pre-mRNA-splicing factor RBM22
  KO
K12872  pre-mRNA-splicing factor RBM22/SLT11
Organism
ncar  Sciurus carolinensis (gray squirrel)
Pathway
ncar03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    124986882
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ncar03041]
    124986882
Spliceosome [BR:ncar03041]
 Complex B
  Other components
   Prp19-related factors
    124986882
 Complex C
    124986882
SSDB
Motif
Pfam: STL11_N zf-CCCH_RBM22 RRM_1 Torus zf_CCCH_4 Nup35_RRM_2 RRM_occluded zf-CCCH_2 zf-CCCH RRM_3 zf-CCCH_4 RRM_YTH1 zf-CCCH_3 zf-CCCH_10 zf-CCCH_12 zf-CCCH_PARP12 RRM_PARP14_3
Other DBs
NCBI-GeneID: 124986882
NCBI-ProteinID: XP_047411677
LinkDB
Position
6:complement(108515986..108525593)
AA seq 420 aa
MATSLGSNTYNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPG
VRMRFKKTEVCQTCSKLKNVCQTCLLDLEYGLPIQVRDAGLSFKDDMPKSDVNKEYYTQN
MEREISNSDGTRPVGMLGKATSTSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDPPEDKTITTLYVGGLG
DTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKSFNKLIVNGRRLNV
KWGRSQAARGKEKEKDGTTDSGIKLEPVPGLPGALPPPPAAEEEASANYFNLPPSGPPAV
VNIALPPPPGIAPPPPPGFGPHMFHPMGPPPPFMRAPGPIHYPSQDPQRMGAHAGKHSSP
NT seq 1263 nt   +upstreamnt  +downstreamnt
atggcgacctctctgggttccaacacctacaacaggcagaactgggaggatgcggacttc
cccattctatgccagacatgtctgggagaaaacccatatatccgaatgaccaaagaaaag
tatggaaaagaatgcaaaatctgtgccaggccattcacagtgtttcgctggtgtcctggg
gtccgcatgcgcttcaagaagactgaagtgtgccaaacctgcagtaaattgaagaatgtc
tgtcagacctgcctcttagacctagaatatggcctgcccatccaggttcgtgatgcagga
ttgtcttttaaagatgacatgccaaagtcagatgtcaacaaagagtactacacacaaaat
atggaaagagaaatttctaactctgatggaacacggccagttggcatgctcgggaaagcc
acatccactagtgacatgctgctcaaattggcccgaaccacaccctattacaaaaggaat
cggccccacatttgctccttctgggtgaaaggagagtgtaaaagaggagaagagtgtcca
tacagacatgagaagcctacagatccagatgacccccttgctgatcagaatattaaagac
cggtattatggaatcaatgaccctgtagcagataagcttctaaagcgggcttcaacaatg
cctcgtctggacccaccagaggataaaactatcaccacattatatgttggtggactgggc
gataccattactgagacagatctcagaaatcatttctaccagttcggagagatccgaaca
atcactgttgtgcagagacaacagtgtgctttcatccagtttgccacaaggcaggctgca
gaagtggctgctgagaagtcctttaataagttgattgtcaatggccgcagactcaatgtg
aaatggggaagatcccaggcagccagaggaaaggagaaagagaaggacggaaccacagac
tctgggatcaagctggagcctgttccaggactgccaggagctcttcctcctcctcctgca
gcagaagaagaagcctctgccaactacttcaaccttcccccaagtggtcctccagctgtg
gtgaacattgccctaccaccaccgccagggattgccccaccccctcccccaggttttggg
ccacacatgttccacccaatgggaccaccccctcctttcatgagggctccaggaccaatc
cactatccttctcaggatcctcagaggatgggagcacatgctgggaaacacagcagcccc
tag

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